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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913913
Clone id YMU001_000037_G04
Library
Length 444
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000037_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGCCTGCAGCAAACTTGACAAACTGGCTGAAAAGAAGCAGCTTGATTCCACTTTGATGCT
GCTTTTTGCAAAGGCATGGGCTGCTGCAAAAGATTCAAACACAATGACAGATGGGATCAA
AGATTTGATGCATCATCTCTATATGGTGGCTAGAGGACATTTACAGCGACTGATACCAAA
AGAGATAAGAATCCTGCAAGACATTCTTGCTTGTGAGGATCCAACTTCGCGTTTCAAGGC
CCTTACGGAATGCTTCTCTCCTGGAGATGAACACACCGAAAAAGAAGCAGATAAGCTGTA
CACGTAGGGTGGCTACTCTTGACACTACCTTAGCTTGTGAAGTTTTCAGTTGGTGCTCAA
ATAGTCAAGAAGTTATGTGGTGCTGAACAGGAAACCGGAAAAGCTTCTAAAATGGATCAA
GCTTGTGCAGGATGCTTATCATCT
■■Homology search results ■■ -
sp_hit_id Q84WN0
Definition sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920, chloroplastic OS=Arabidopsis thaliana
Align length 101
Score (bit) 103.0
E-value 3.0e-22
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913913|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_G04.
         (429 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920, chlorop...   103   3e-22
sp|P26002|VNSS_TSWV1 Non-structural protein NS-S OS=Tomato spott...    29   7.0  
sp|P10221|V120_HHV11 Capsid assembly protein UL37 OS=Human herpe...    29   9.1  
sp|O94263|DPB2_SCHPO DNA polymerase epsilon subunit B OS=Schizos...    29   9.1  

>sp|Q84WN0|Y4920_ARATH Uncharacterized protein At4g37920,
           chloroplastic OS=Arabidopsis thaliana GN=At4g37920 PE=1
           SV=2
          Length = 427

 Score =  103 bits (257), Expect = 3e-22
 Identities = 49/101 (48%), Positives = 69/101 (68%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+  LA+ K+LDS+L+LL   A+AAAK+S T+T+  KD+M+HLY   +  L+ + PK
Sbjct: 250 ACEKIRSLAKAKELDSSLILLINSAYAAAKESQTVTNEAKDIMYHLYKATKSSLRSITPK 309

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           EI++L+ +L   DP  RF AL   FSPGD+H  K+   LYT
Sbjct: 310 EIKLLKYLLNITDPEERFSALATAFSPGDDHEAKDPKALYT 350


>sp|P26002|VNSS_TSWV1 Non-structural protein NS-S OS=Tomato spotted
           wilt virus (strain Brazilian Br-01) GN=NSS PE=3 SV=1
          Length = 464

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 13/43 (30%), Positives = 24/43 (55%)
 Frame = +2

Query: 152 RGHLQRLIPKEIRILQDILACEDPTSRFKALTECFSPGDEHTE 280
           +GHL+ L P ++  ++ I+   D T RF+   +   P D++ E
Sbjct: 113 QGHLKVLSPAQLHSIESIMNRSDITDRFQLQEKDIIPNDKYIE 155


>sp|P10221|V120_HHV11 Capsid assembly protein UL37 OS=Human
           herpesvirus 1 (strain 17) GN=UL37 PE=1 SV=1
          Length = 1123

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 14/49 (28%), Positives = 27/49 (55%)
 Frame = +2

Query: 32  KKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIP 178
           + +L + + LL   A      +  M D I+ L+  LY+++RG +++L P
Sbjct: 671 RTKLGALITLLEPAARGGLGPTMQMADNIEQLLRELYVISRGAVEQLRP 719


>sp|O94263|DPB2_SCHPO DNA polymerase epsilon subunit B
           OS=Schizosaccharomyces pombe GN=dpb2 PE=1 SV=1
          Length = 594

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 231 VSRPLRNASLLEMNTPKKKQISCTRRVATLDTT 329
           V+RPL    L  +N P + ++S   RV TL+TT
Sbjct: 86  VTRPLLIPVLANLNVPHEVRVSSLARVQTLETT 118
tr_hit_id Q9C8X8
Definition tr|Q9C8X8|Q9C8X8_ARATH Putative uncharacterized protein F7F23.4 (At1g36320/F7F23_4) (Putative uncharacterized protein) OS=Arabidopsis thaliana
Align length 101
Score (bit) 122.0
E-value 7.0e-27
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913913|Adiantum capillus-veneris mRNA, clone:
YMU001_000037_G04.
         (429 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9C8X8|Q9C8X8_ARATH Putative uncharacterized protein F7F23.4 ...   122   7e-27
tr|Q570H7|Q570H7_ARATH Putative uncharacterized protein At1g3632...   122   7e-27
tr|A7NV41|A7NV41_VITVI Chromosome chr18 scaffold_1, whole genome...   122   1e-26
tr|A7R435|A7R435_VITVI Chromosome undetermined scaffold_611, who...   105   9e-22
tr|A3A5Q9|A3A5Q9_ORYSJ Putative uncharacterized protein OS=Oryza...   105   9e-22
tr|A2X3M2|A2X3M2_ORYSI Putative uncharacterized protein OS=Oryza...   105   9e-22
tr|B6U8B7|B6U8B7_MAIZE Putative uncharacterized protein OS=Zea m...   105   1e-21
tr|A9YWR5|A9YWR5_MEDTR Putative uncharacterized protein OS=Medic...   105   1e-21
tr|B6TPX9|B6TPX9_MAIZE Putative uncharacterized protein OS=Zea m...   103   3e-21
tr|A7R961|A7R961_VITVI Chromosome undetermined scaffold_3382, wh...   103   3e-21
tr|Q656E2|Q656E2_ORYSJ Endoribonuclease E-like protein (Os01g030...   102   1e-20
tr|A9SA61|A9SA61_PHYPA Predicted protein OS=Physcomitrella paten...   100   4e-20
tr|A9REV5|A9REV5_PHYPA Predicted protein OS=Physcomitrella paten...    98   2e-19
tr|A9S0L9|A9S0L9_PHYPA Predicted protein (Fragment) OS=Physcomit...    93   6e-18
tr|A3BRV1|A3BRV1_ORYSJ Putative uncharacterized protein OS=Oryza...    87   5e-16
tr|A2ZSA8|A2ZSA8_ORYSJ Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|A2WNZ7|A2WNZ7_ORYSI Putative uncharacterized protein OS=Oryza...    86   1e-15
tr|Q6K869|Q6K869_ORYSJ Os02g0291500 protein OS=Oryza sativa subs...    78   2e-13
tr|Q7EZU1|Q7EZU1_ORYSJ Putative uncharacterized protein P0005C02...    77   6e-13
tr|Q015G1|Q015G1_OSTTA Homology to unknown gene OS=Ostreococcus ...    73   6e-12
tr|A4S052|A4S052_OSTLU Predicted protein OS=Ostreococcus lucimar...    70   5e-11
tr|Q0J6H1|Q0J6H1_ORYSJ Os08g0320800 protein OS=Oryza sativa subs...    67   3e-10
tr|B4X709|B4X709_PNEJI Major surface glycoprotein Rucl14 (Fragme...    38   0.29 
tr|A8J1Q7|A8J1Q7_CHLRE Predicted protein OS=Chlamydomonas reinha...    37   0.38 
tr|Q83D52|Q83D52_COXBU Hypothetical exported membrane associated...    34   4.2  
tr|B6J6W2|B6J6W2_COXB1 Hypothetical exported membrane-associated...    34   4.2  
tr|B6J0H1|B6J0H1_COXB2 Hypothetical exported membrane-associated...    34   4.2  
tr|A9ND25|A9ND25_COXBR Putative uncharacterized protein OS=Coxie...    34   4.2  
tr|A9KFZ4|A9KFZ4_COXBN Hypothetical exported membrane associated...    34   4.2  
tr|A9ZH88|A9ZH88_COXBU Putative uncharacterized protein OS=Coxie...    34   4.2  

>tr|Q9C8X8|Q9C8X8_ARATH Putative uncharacterized protein F7F23.4
           (At1g36320/F7F23_4) (Putative uncharacterized protein)
           OS=Arabidopsis thaliana GN=At1g36320 PE=2 SV=1
          Length = 414

 Score =  122 bits (307), Expect = 7e-27
 Identities = 56/101 (55%), Positives = 77/101 (76%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+D LAEK QLDS L+L+  KAW+AAK+SN M + +KD+++HLY+ ARG+LQRL+PK
Sbjct: 262 ACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYVTARGNLQRLMPK 321

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           E+RIL+ +L+ EDP  +  AL + F+PGDE    + D LYT
Sbjct: 322 EVRILKYLLSIEDPQEQISALQDAFTPGDELEGTDVDYLYT 362


>tr|Q570H7|Q570H7_ARATH Putative uncharacterized protein At1g36320
           (Fragment) OS=Arabidopsis thaliana GN=At1g36320 PE=2
           SV=1
          Length = 159

 Score =  122 bits (307), Expect = 7e-27
 Identities = 56/101 (55%), Positives = 77/101 (76%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+D LAEK QLDS L+L+  KAW+AAK+SN M + +KD+++HLY+ ARG+LQRL+PK
Sbjct: 7   ACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMMKEEVKDILYHLYVTARGNLQRLMPK 66

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           E+RIL+ +L+ EDP  +  AL + F+PGDE    + D LYT
Sbjct: 67  EVRILKYLLSIEDPQEQISALQDAFTPGDELEGTDVDYLYT 107


>tr|A7NV41|A7NV41_VITVI Chromosome chr18 scaffold_1, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015291001
           PE=4 SV=1
          Length = 393

 Score =  122 bits (305), Expect = 1e-26
 Identities = 58/101 (57%), Positives = 74/101 (73%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+D LAEK QLDS L+L+  KAW+AAK+SN   D +KD++ HLY  ARG+LQRL+PK
Sbjct: 241 ACRKIDSLAEKNQLDSALVLMITKAWSAAKESNMTKDEVKDVLFHLYTTARGNLQRLMPK 300

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           EIRIL+ +L  EDP  +  AL + F+PGDE   K+ D LYT
Sbjct: 301 EIRILKYLLTIEDPEEKMSALKDAFTPGDEIEGKDVDCLYT 341


>tr|A7R435|A7R435_VITVI Chromosome undetermined scaffold_611, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00004140001 PE=4 SV=1
          Length = 312

 Score =  105 bits (263), Expect = 9e-22
 Identities = 48/101 (47%), Positives = 69/101 (68%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+  LA+ K+LDS+L+LL   AW+AAK+S TM + +KD+M+HLY   +  L+ + PK
Sbjct: 156 ACEKIKSLAKAKELDSSLILLINSAWSAAKESTTMKNEVKDIMYHLYKATKSSLRSIAPK 215

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           EI++L+ +L   DP  RF AL   FSPGD+   K+ + LYT
Sbjct: 216 EIKLLKHLLNITDPEERFSALASAFSPGDDREAKDPNALYT 256


>tr|A3A5Q9|A3A5Q9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_006131 PE=4 SV=1
          Length = 472

 Score =  105 bits (263), Expect = 9e-22
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+D LAEKK+LDS L+L+ +KAW+AAK ++      KD+M HLYM A  +LQR +PK
Sbjct: 286 ACRKIDDLAEKKELDSALVLMLSKAWSAAKGTDITKSEAKDIMFHLYMTAVANLQRQMPK 345

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           +IRIL+ ++  EDP  R  AL + F+PG E      D LYT
Sbjct: 346 DIRILKHLIMIEDPEERLSALNDAFTPGPELQGDNVDTLYT 386


>tr|A2X3M2|A2X3M2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06814 PE=4 SV=1
          Length = 472

 Score =  105 bits (263), Expect = 9e-22
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+D LAEKK+LDS L+L+ +KAW+AAK ++      KD+M HLYM A  +LQR +PK
Sbjct: 286 ACRKIDDLAEKKELDSALVLMLSKAWSAAKGTDITKSEAKDIMFHLYMTAVANLQRQMPK 345

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           +IRIL+ ++  EDP  R  AL + F+PG E      D LYT
Sbjct: 346 DIRILKHLIMIEDPEERLSALNDAFTPGPELQGDNVDTLYT 386


>tr|B6U8B7|B6U8B7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 438

 Score =  105 bits (261), Expect = 1e-21
 Identities = 51/101 (50%), Positives = 68/101 (67%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+D LAEKK+LDS L+L+ +KAW+AAK ++      KD+M HLYM A  +LQR +PK
Sbjct: 286 ACRKIDDLAEKKELDSALVLMLSKAWSAAKGTDITKSEAKDIMFHLYMTAVANLQRQMPK 345

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           +IRIL+ ++  EDP  R  AL + F+PG E      D LYT
Sbjct: 346 DIRILKHLIMIEDPEERSSALNDAFTPGPELQGDNVDTLYT 386


>tr|A9YWR5|A9YWR5_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=4 SV=1
          Length = 422

 Score =  105 bits (261), Expect = 1e-21
 Identities = 49/101 (48%), Positives = 69/101 (68%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+  LA+ K+LDS+L+LL + AWA AK+S TM + +K++M+ LY   +  L+ + PK
Sbjct: 251 ACKKIKSLAKAKELDSSLILLISGAWAKAKESTTMKNEVKEIMYQLYKTTKSSLRTIAPK 310

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           EIR+L+ +L   DP  RF AL   FSPGDEH  K+ + LYT
Sbjct: 311 EIRLLKHLLNIIDPEERFSALATAFSPGDEHEAKDPNALYT 351


>tr|B6TPX9|B6TPX9_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 411

 Score =  103 bits (258), Expect = 3e-21
 Identities = 48/101 (47%), Positives = 69/101 (68%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+  LA+ K+LDS+L+LL  +AWAAAK+S TM D +KD+M+H+Y   +  L+ + P 
Sbjct: 243 ACDKIKSLAKAKELDSSLILLINRAWAAAKESTTMNDKVKDIMYHIYTTTKESLKSISPP 302

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLYT 304
           E+++L+ +L  E+P  RF AL   FSPGD    K+ D LYT
Sbjct: 303 EMKLLKYLLNIEEPEERFGALATAFSPGDGREAKDEDALYT 343


>tr|A7R961|A7R961_VITVI Chromosome undetermined scaffold_3382, whole
           genome shotgun sequence (Fragment) OS=Vitis vinifera
           GN=GSVIVT00012734001 PE=4 SV=1
          Length = 143

 Score =  103 bits (258), Expect = 3e-21
 Identities = 47/100 (47%), Positives = 68/100 (68%)
 Frame = +2

Query: 2   ACSKLDKLAEKKQLDSTLMLLFAKAWAAAKDSNTMTDGIKDLMHHLYMVARGHLQRLIPK 181
           AC K+  LA+ K+LDS+L+LL   AW+AAK+S TM + +KD+M+HLY   +  L+ + PK
Sbjct: 44  ACEKIKSLAKAKELDSSLILLINSAWSAAKESTTMKNEVKDIMYHLYKATKSSLRSIAPK 103

Query: 182 EIRILQDILACEDPTSRFKALTECFSPGDEHTEKEADKLY 301
           EI++L+ +L   DP  RF AL   FSPGD+   K+ + LY
Sbjct: 104 EIKLLKHLLNITDPEERFSALASAFSPGDDREAKDPNALY 143