BP913934
Clone id YMU001_000038_A05
Library
Length 388
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_A05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CACAGAGTCCAGCTTCTGCAACAGGAAAGGAAACATATTCTTTTCTCATACTGCCGTTTA
TCGAACAACCAGCTGTACGTAACAAGGTGGTAAGGGGATAAGAGGGCATTATTAGTGCTC
ATCCTTTTGGCAATGAATTATTGAAATGAGCAAATATAGAGGAGAAGATTTTTACAATTG
AGGCTTGTAAAGGCGGGAGACGATCGTAGAGCCGCAGCGGGGATGGCTAGATCTTCAAAG
GCAATGGTAGGTGACATAAGTGGTTGCAAGACGGAATTGGTATACATGTTATTTTGAAAA
TATTATGTGCGGTTAGTTCTTTGACCGGTTGTTGCTGGGATCTATTGATTTGATTTGCAA
GCACTAGCAGCTGATGTATCACTTAACA
■■Homology search results ■■ -
sp_hit_id Q9NZ71
Definition sp|Q9NZ71|RTEL1_HUMAN Regulator of telomere elongation helicase 1 OS=Homo sapiens
Align length 48
Score (bit) 30.8
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913934|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_A05.
(388 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9NZ71|RTEL1_HUMAN Regulator of telomere elongation helicase ... 31 2.2
sp|Q00121|VG52_ICHV1 Uncharacterized gene 52 protein OS=Ictaluri... 29 8.4

>sp|Q9NZ71|RTEL1_HUMAN Regulator of telomere elongation helicase 1
OS=Homo sapiens GN=RTEL1 PE=2 SV=1
Length = 1400

Score = 30.8 bits (68), Expect = 2.2
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = -3

Query: 314 NRT*YFQNNMYTNSVLQPLMSPTIAFEDLAIPAAALRSSPAFTSLNCK 171
+R+ +F NN+ S+ Q L SP + EDL + R P + S N K
Sbjct: 169 SRSCHFYNNVEEKSLEQELASPILDIEDLVKSGSKHRVCPYYLSRNLK 216


>sp|Q00121|VG52_ICHV1 Uncharacterized gene 52 protein OS=Ictalurid
herpesvirus 1 GN=52 PE=4 SV=1
Length = 318

Score = 28.9 bits (63), Expect = 8.4
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1

Query: 337 QQQPVKELTAHNIFKITCIPIPSCNHLC 254
QQ P+ +T+ + I+ + P C HLC
Sbjct: 3 QQNPIPIITSITVTNISSVAAPHCTHLC 30


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913934|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_A05.
(388 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******