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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913936
Clone id YMU001_000038_A10
Library
Length 425
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCACAAAAAGAAAATGCACATGTGAAGGTAATGGTTATAAGAACACTCTCTAAGCTACCA
TCGCCAGAGTTTCAGACATTGCTGACTCAAAAAATAAAGAGGAAATTGAGCTTGCAAGGG
CAAAAGAGCAGCGAGGCATATGCAATACATCAACTTCTCATGTCCTCTTGAGCTGTACAT
ACACAAAACATTGTTGTCTCTTGCCTGCACTTTGCCCAGAAGCATGCCACAATCAACACT
CACTGATCAAACTTGTAATATTTATCAACTGCTACTAATACATCCCATGTGCAACACATT
CCTTTGGGCAACACTGCCAAGTCGCCTGCACTTATTTCCACATGCTCTGACGATCCTTCC
GGATAAACCTTCACCTTCCCCTTCACTAAGTAGCATGTCTCTGATGCATCGTACGTACAC
GGAAA
■■Homology search results ■■ -
sp_hit_id Q862Z3
Definition sp|Q862Z3|UROM_CANFA Uromodulin OS=Canis familiaris
Align length 75
Score (bit) 32.0
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913936|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_A10.
         (408 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q862Z3|UROM_CANFA Uromodulin OS=Canis familiaris GN=UMOD PE=2...    32   1.00 
sp|A5UL75|RL5_METS3 50S ribosomal protein L5P OS=Methanobrevibac...    31   2.2  
sp|Q2UUI3|CCR4_ASPOR Glucose-repressible alcohol dehydrogenase t...    30   2.9  
sp|Q66B14|HUTI_YERPS Imidazolonepropionase OS=Yersinia pseudotub...    29   6.3  
sp|A4TJT7|HUTI_YERPP Imidazolonepropionase OS=Yersinia pestis (s...    29   6.3  
sp|Q1CJP8|HUTI_YERPN Imidazolonepropionase OS=Yersinia pestis bv...    29   6.3  
sp|Q9ZC74|HUTI_YERPE Imidazolonepropionase OS=Yersinia pestis GN...    29   6.3  
sp|Q1C8A1|HUTI_YERPA Imidazolonepropionase OS=Yersinia pestis bv...    29   6.3  
sp|A7FIK8|HUTI_YERP3 Imidazolonepropionase OS=Yersinia pseudotub...    29   6.3  
sp|Q9TSL6|UDB23_MACFA UDP-glucuronosyltransferase 2B23 OS=Macaca...    29   8.2  
sp|Q86VV8|RTTN_HUMAN Rotatin OS=Homo sapiens GN=RTTN PE=2 SV=2         29   8.2  
sp|Q2NFX0|RL5_METST 50S ribosomal protein L5P OS=Methanosphaera ...    29   8.2  
sp|A1JS25|HUTI_YERE8 Imidazolonepropionase OS=Yersinia enterocol...    29   8.2  
sp|Q6LQ59|HUTI_PHOPR Imidazolonepropionase OS=Photobacterium pro...    29   8.2  
sp|P35574|GDE_RABIT Glycogen debranching enzyme OS=Oryctolagus c...    29   8.5  

>sp|Q862Z3|UROM_CANFA Uromodulin OS=Canis familiaris GN=UMOD PE=2
           SV=1
          Length = 642

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 7/75 (9%)
 Frame = -1

Query: 288 KGMCCTWDVLVAVDK----YYKFDQ*VLIVACFWAKCRQETTMFCV---CTAQEDMRS*C 130
           +G CC WD  + V      YY ++       C+ A C   T++      C+ +ED    C
Sbjct: 254 RGHCCLWDASIQVKACAGGYYVYNL-TETPECYLAYCTDPTSVLGTCEECSVEED----C 308

Query: 129 IAYASLLFCPCKLNF 85
            ++  +  C CK +F
Sbjct: 309 KSHDGMWSCQCKQDF 323


>sp|A5UL75|RL5_METS3 50S ribosomal protein L5P OS=Methanobrevibacter
           smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl5p PE=3
           SV=1
          Length = 170

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 14/34 (41%), Positives = 23/34 (67%)
 Frame = +2

Query: 20  IRTLSKLPSPEFQTLLTQKIKRKLSLQGQKSSEA 121
           ++T SK+ +PEF     Q I  KL+L+G+K+ +A
Sbjct: 41  VKTFSKVTNPEFGIRKRQPIACKLTLRGEKADKA 74


>sp|Q2UUI3|CCR4_ASPOR Glucose-repressible alcohol dehydrogenase
           transcriptional effector OS=Aspergillus oryzae GN=ccr4
           PE=3 SV=1
          Length = 746

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
 Frame = -1

Query: 399 TYDASETCYLVKGKVKVYPEGSS-----EHVEISAGDLAVLPKGMCCTWDVLVAVDKYYK 235
           +YD  +  YL   K+K  P+        EH+++S  DL  LP+ +     +L ++ K Y 
Sbjct: 246 SYDFLKELYLNHNKLKALPQTIGQLRKLEHLDLSGNDLTELPEEI----GMLTSLKKLYL 301

Query: 234 FD 229
           FD
Sbjct: 302 FD 303


>sp|Q66B14|HUTI_YERPS Imidazolonepropionase OS=Yersinia
           pseudotuberculosis GN=hutI PE=3 SV=1
          Length = 406

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 168 KTLLSLACTLPRSMPQSTLTDQTCNIYQLLLIHPMCNTFLWATLPSRLH 314
           + +L++ACTL R  P+  L   TC+  Q L +     T     L + +H
Sbjct: 329 RLMLNMACTLFRMTPEEALAGVTCHAAQALGVQQTQGTLETGKLANWVH 377


>sp|A4TJT7|HUTI_YERPP Imidazolonepropionase OS=Yersinia pestis
           (strain Pestoides F) GN=hutI PE=3 SV=1
          Length = 406

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 168 KTLLSLACTLPRSMPQSTLTDQTCNIYQLLLIHPMCNTFLWATLPSRLH 314
           + +L++ACTL R  P+  L   TC+  Q L +     T     L + +H
Sbjct: 329 RLMLNMACTLFRMTPEEALAGVTCHAAQALGVQQTQGTLETGKLANWVH 377


>sp|Q1CJP8|HUTI_YERPN Imidazolonepropionase OS=Yersinia pestis bv.
           Antiqua (strain Nepal516) GN=hutI PE=3 SV=1
          Length = 406

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 168 KTLLSLACTLPRSMPQSTLTDQTCNIYQLLLIHPMCNTFLWATLPSRLH 314
           + +L++ACTL R  P+  L   TC+  Q L +     T     L + +H
Sbjct: 329 RLMLNMACTLFRMTPEEALAGVTCHAAQALGVQQTQGTLETGKLANWVH 377


>sp|Q9ZC74|HUTI_YERPE Imidazolonepropionase OS=Yersinia pestis
           GN=hutI PE=3 SV=1
          Length = 406

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 168 KTLLSLACTLPRSMPQSTLTDQTCNIYQLLLIHPMCNTFLWATLPSRLH 314
           + +L++ACTL R  P+  L   TC+  Q L +     T     L + +H
Sbjct: 329 RLMLNMACTLFRMTPEEALAGVTCHAAQALGVQQTQGTLETGKLANWVH 377


>sp|Q1C8A1|HUTI_YERPA Imidazolonepropionase OS=Yersinia pestis bv.
           Antiqua (strain Antiqua) GN=hutI PE=3 SV=1
          Length = 406

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 168 KTLLSLACTLPRSMPQSTLTDQTCNIYQLLLIHPMCNTFLWATLPSRLH 314
           + +L++ACTL R  P+  L   TC+  Q L +     T     L + +H
Sbjct: 329 RLMLNMACTLFRMTPEEALAGVTCHAAQALGVQQTQGTLETGKLANWVH 377


>sp|A7FIK8|HUTI_YERP3 Imidazolonepropionase OS=Yersinia
           pseudotuberculosis serotype O:1b (strain IP 31758)
           GN=hutI PE=3 SV=1
          Length = 406

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +3

Query: 168 KTLLSLACTLPRSMPQSTLTDQTCNIYQLLLIHPMCNTFLWATLPSRLH 314
           + +L++ACTL R  P+  L   TC+  Q L +     T     L + +H
Sbjct: 329 RLMLNMACTLFRMTPEEALAGVTCHAAQALGVQQTQGTLETGKLANWVH 377


>sp|Q9TSL6|UDB23_MACFA UDP-glucuronosyltransferase 2B23 OS=Macaca
           fascicularis GN=UGT2B23 PE=1 SV=1
          Length = 529

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 11/22 (50%), Positives = 17/22 (77%)
 Frame = +2

Query: 32  SKLPSPEFQTLLTQKIKRKLSL 97
           + LP PEF+ ++TQ+IKR + L
Sbjct: 79  TSLPKPEFENIVTQEIKRWIEL 100
tr_hit_id A9TEC3
Definition tr|A9TEC3|A9TEC3_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 60
Score (bit) 99.4
E-value 8.0e-20
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913936|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_A10.
         (408 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TEC3|A9TEC3_PHYPA Predicted protein OS=Physcomitrella paten...    99   8e-20
tr|Q9SV91|Q9SV91_ARATH Putative uncharacterized protein AT4g1030...    97   5e-19
tr|Q8LEK1|Q8LEK1_ARATH Putative uncharacterized protein OS=Arabi...    97   5e-19
tr|Q6K9G4|Q6K9G4_ORYSJ Os02g0620400 protein OS=Oryza sativa subs...    96   1e-18
tr|B8AFI0|B8AFI0_ORYSI Putative uncharacterized protein OS=Oryza...    96   1e-18
tr|A3A955|A3A955_ORYSJ Putative uncharacterized protein OS=Oryza...    96   1e-18
tr|A9PG71|A9PG71_POPTR Putative uncharacterized protein OS=Popul...    94   3e-18
tr|Q01J39|Q01J39_ORYSA OSIGBa0140O07.4 protein OS=Oryza sativa G...    94   4e-18
tr|B8AUC7|B8AUC7_ORYSI Putative uncharacterized protein OS=Oryza...    94   4e-18
tr|Q7XUW6|Q7XUW6_ORYSJ OSJNBa0027P08.10 protein (Putative unchar...    92   1e-17
tr|Q0JCX3|Q0JCX3_ORYSJ Os04g0445200 protein OS=Oryza sativa subs...    92   1e-17
tr|B4F9Z6|B4F9Z6_MAIZE Enzyme of the cupin superfamily OS=Zea ma...    92   1e-17
tr|B6TP17|B6TP17_MAIZE Enzyme of the cupin superfamily OS=Zea ma...    91   2e-17
tr|B6T5M3|B6T5M3_MAIZE Enzyme of the cupin superfamily OS=Zea ma...    91   2e-17
tr|A9P212|A9P212_PICSI Putative uncharacterized protein OS=Picea...    91   3e-17
tr|Q9M8Y6|Q9M8Y6_ARATH T6K12.8 protein (Putative uncharacterized...    90   5e-17
tr|A7Q7Q9|A7Q7Q9_VITVI Chromosome chr18 scaffold_61, whole genom...    90   5e-17
tr|A9NYM4|A9NYM4_PICSI Putative uncharacterized protein OS=Picea...    89   1e-16
tr|A9NK05|A9NK05_PICSI Putative uncharacterized protein OS=Picea...    89   1e-16
tr|B8LMH1|B8LMH1_PICSI Putative uncharacterized protein OS=Picea...    88   2e-16
tr|B6U0I3|B6U0I3_MAIZE Enzyme of the cupin superfamily OS=Zea ma...    84   4e-15
tr|Q7XQ13|Q7XQ13_ORYSJ OSJNBb0065L13.6 protein (Putative unchara...    79   1e-13
tr|Q0JBU4|Q0JBU4_ORYSJ Os04g0509400 protein OS=Oryza sativa subs...    79   1e-13
tr|Q01HF4|Q01HF4_ORYSA OSIGBa0157K09-H0214G12.3 protein OS=Oryza...    79   1e-13
tr|B7F8E8|B7F8E8_ORYSJ cDNA, clone: J065030M05, full insert sequ...    79   1e-13
tr|A2XVF2|A2XVF2_ORYSI Putative uncharacterized protein OS=Oryza...    79   1e-13
tr|Q60B25|Q60B25_METCA Putative uncharacterized protein OS=Methy...    72   1e-11
tr|A1AKE9|A1AKE9_PELPD Putative uncharacterized protein OS=Pelob...    72   1e-11
tr|A7Q7Q8|A7Q7Q8_VITVI Chromosome chr18 scaffold_61, whole genom...    70   5e-11
tr|Q0I938|Q0I938_SYNS3 Predicted enzyme of the cupin superfamily...    69   9e-11

>tr|A9TEC3|A9TEC3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_144325 PE=4 SV=1
          Length = 106

 Score = 99.4 bits (246), Expect = 8e-20
 Identities = 44/60 (73%), Positives = 50/60 (83%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEHVEISAGDLAVLPKGMCCTWDVLVAVDKYYKFD 229
           FP TYDA+ETC+L++GKVKVYPEGSSE VE  AGDL V PKGM CTWDV   VDK+Y+FD
Sbjct: 46  FPWTYDATETCFLLQGKVKVYPEGSSEFVEFGAGDLVVFPKGMSCTWDVSETVDKHYQFD 105


>tr|Q9SV91|Q9SV91_ARATH Putative uncharacterized protein AT4g10300
           OS=Arabidopsis thaliana GN=F24G24.100 PE=2 SV=1
          Length = 134

 Score = 96.7 bits (239), Expect = 5e-19
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEHVEISAGDLAVLPKGMCCTWDVLVAVDKYYKFD 229
           FP TY A ETCYL++GKVKVYP GS E VEI AGD  V PKGM CTWDV VAVDK+Y+F+
Sbjct: 75  FPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 134


>tr|Q8LEK1|Q8LEK1_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 136

 Score = 96.7 bits (239), Expect = 5e-19
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEHVEISAGDLAVLPKGMCCTWDVLVAVDKYYKFD 229
           FP TY A ETCYL++GKVKVYP GS E VEI AGD  V PKGM CTWDV VAVDK+Y+F+
Sbjct: 77  FPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 136


>tr|Q6K9G4|Q6K9G4_ORYSJ Os02g0620400 protein OS=Oryza sativa subsp.
           japonica GN=OJ1372_D06.24 PE=4 SV=1
          Length = 113

 Score = 95.5 bits (236), Expect = 1e-18
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEHVEISAGDLAVLPKGMCCTWDVLVAVDKYYKFD 229
           FP  +DA ETCYLVKGKV+ + +GSSE VE  AGDL V PKG+ CTWDVL AVDKYYKFD
Sbjct: 52  FPVKFDARETCYLVKGKVRAHIKGSSECVEFGAGDLVVFPKGLSCTWDVLAAVDKYYKFD 111


>tr|B8AFI0|B8AFI0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_08107 PE=4 SV=1
          Length = 113

 Score = 95.5 bits (236), Expect = 1e-18
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEHVEISAGDLAVLPKGMCCTWDVLVAVDKYYKFD 229
           FP  +DA ETCYLVKGKV+ + +GSSE VE  AGDL V PKG+ CTWDVL AVDKYYKFD
Sbjct: 52  FPVKFDARETCYLVKGKVRAHIKGSSECVEFGAGDLVVFPKGLSCTWDVLAAVDKYYKFD 111


>tr|A3A955|A3A955_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_007327 PE=4 SV=1
          Length = 104

 Score = 95.5 bits (236), Expect = 1e-18
 Identities = 43/60 (71%), Positives = 48/60 (80%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEHVEISAGDLAVLPKGMCCTWDVLVAVDKYYKFD 229
           FP  +DA ETCYLVKGKV+ + +GSSE VE  AGDL V PKG+ CTWDVL AVDKYYKFD
Sbjct: 43  FPVKFDARETCYLVKGKVRAHIKGSSECVEFGAGDLVVFPKGLSCTWDVLAAVDKYYKFD 102


>tr|A9PG71|A9PG71_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 162

 Score = 94.4 bits (233), Expect = 3e-18
 Identities = 41/60 (68%), Positives = 48/60 (80%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEHVEISAGDLAVLPKGMCCTWDVLVAVDKYYKFD 229
           FP TY A ETCYL++GKVKVYP+G+ E VEI+AGDL   PKGM CTWDV V VDK+Y F+
Sbjct: 103 FPWTYSAKETCYLLEGKVKVYPDGAEEPVEITAGDLVEFPKGMSCTWDVAVGVDKHYNFE 162


>tr|Q01J39|Q01J39_ORYSA OSIGBa0140O07.4 protein OS=Oryza sativa
           GN=OSIGBa0140O07.4 PE=4 SV=1
          Length = 148

 Score = 93.6 bits (231), Expect = 4e-18
 Identities = 43/61 (70%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEH-VEISAGDLAVLPKGMCCTWDVLVAVDKYYKF 232
           FP TY A ETCYL++GKVKVYP+G+ E  VEI+AGDL V PKGM CTWDV  AVDK+YKF
Sbjct: 88  FPWTYSAKETCYLLQGKVKVYPDGAGEDFVEIAAGDLVVFPKGMSCTWDVAEAVDKHYKF 147

Query: 231 D 229
           +
Sbjct: 148 E 148


>tr|B8AUC7|B8AUC7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16052 PE=4 SV=1
          Length = 154

 Score = 93.6 bits (231), Expect = 4e-18
 Identities = 43/61 (70%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEH-VEISAGDLAVLPKGMCCTWDVLVAVDKYYKF 232
           FP TY A ETCYL++GKVKVYP+G+ E  VEI+AGDL V PKGM CTWDV  AVDK+YKF
Sbjct: 94  FPWTYSAKETCYLLQGKVKVYPDGAGEDFVEIAAGDLVVFPKGMSCTWDVAEAVDKHYKF 153

Query: 231 D 229
           +
Sbjct: 154 E 154


>tr|Q7XUW6|Q7XUW6_ORYSJ OSJNBa0027P08.10 protein (Putative
           uncharacterized protein) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0027P08.10 PE=4 SV=2
          Length = 148

 Score = 92.0 bits (227), Expect = 1e-17
 Identities = 42/61 (68%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
 Frame = -1

Query: 408 FPCTYDASETCYLVKGKVKVYPEGSSEH-VEISAGDLAVLPKGMCCTWDVLVAVDKYYKF 232
           FP TY A ETCYL++GKVKV+P+G+ E  VEI+AGDL V PKGM CTWDV  AVDK+YKF
Sbjct: 88  FPWTYSAKETCYLLQGKVKVFPDGAGEDFVEIAAGDLVVFPKGMSCTWDVAEAVDKHYKF 147

Query: 231 D 229
           +
Sbjct: 148 E 148