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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913937
Clone id YMU001_000038_A11
Library
Length 549
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTGTTGATTATAACCTTCAGTTACATTTTAGATTAAGCTAAACAGAATTGCTCTATCACA
CAAGGTGAAGTACACTTCTCTTCTCCACAGATGATGGAAATGCCTTGCCACTTACAACCC
TTTTGAGGTCTTACAGGCATATCGATGTGCATACTCCCAAGGGGAACTCCATGCATGCAT
TTACAACCACAAAAGACCTGTAAAAGACACTCGTCCTAGCAAAAAGGGATTTGTGAGCTT
TCATGCAAAGTACCAAGAGTGTTCATGGCAGTGGGAGGGAGCTGGTGATAGAGCTTTGCC
TTCTATATCAAAACCTGCTGCGGCCGCTGGTTGCTTACTACACGCAAGCATAATCCACAC
CAGCCTTGTCCACAACTACAGCCAGCAGCTACATTTGTCTGCCTTAGAGTCAAGCTCAAA
ACTCTAAGCCTTGAAAGAGCCTGCTTGCTGGCTGCCTCAAAGTATTGGGTTTCTGTCTCT
CCTCCTCAACACACAGATGTAGCGTCTTCACGAGAGCCTGCATACTGGCTACCCCAAAGC
ATATGGGTG
■■Homology search results ■■ -
sp_hit_id O88799
Definition sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus
Align length 60
Score (bit) 33.1
E-value 0.91
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913937|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_A11.
         (549 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1        33   0.91 
sp|Q9Y493|ZAN_HUMAN Zonadhesin OS=Homo sapiens GN=ZAN PE=2 SV=3        33   0.91 
sp|Q65UH7|CMOB_MANSM tRNA (mo5U34)-methyltransferase OS=Mannheim...    33   1.2  
sp|P56880|CLD20_HUMAN Claudin-20 OS=Homo sapiens GN=CLDN20 PE=2 ...    32   2.7  
sp|Q5E9M9|MIRO2_BOVIN Mitochondrial Rho GTPase 2 OS=Bos taurus G...    31   3.5  
sp|Q7VBL4|GLGB_PROMA 1,4-alpha-glucan-branching enzyme OS=Prochl...    31   4.6  
sp|Q3E763|YD246_YEAST Uncharacterized protein YDR246W-A OS=Sacch...    30   7.7  

>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
          Length = 5376

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -2

Query: 215  DECLLQVFCGCKCMHGV--PLGSMHIDMPVRPQKGCKWQGISIICGEEKCTSPCVIEQFC 42
            D+C+L++ CGCK   GV  P G   I+      + C   G +I C   KC S    E +C
Sbjct: 2750 DKCVLRIECGCKDAQGVLIPAGKTWINRGC--TQSCSCMGGAIQCQNFKCPS----EAYC 2803



 Score = 30.4 bits (67), Expect = 5.9
 Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
 Frame = -2

Query: 215  DECLLQVFCGCKCMHG--VPLGSMHIDMPVRPQKGCKWQGISIICGEEKC 72
            D+C+L++ CGCK   G  +P G   I       K C   G  I C + +C
Sbjct: 4079 DKCVLRIQCGCKDTQGGLIPAGRTWISSDC--TKSCSCMGGIIQCRDFQC 4126


>sp|Q9Y493|ZAN_HUMAN Zonadhesin OS=Homo sapiens GN=ZAN PE=2 SV=3
          Length = 2812

 Score = 33.1 bits (74), Expect = 0.91
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 215  DECLLQVFCGCKCMHG--VPLGSMHIDMPVRPQKGCKWQGISIICGEEKCTS 66
            D+C+ +  CGCK  HG  +PLG   +      +  C   G +I CG+ +C S
Sbjct: 2259 DKCVPRSQCGCKDAHGGSIPLGKSWVSSGCTEK--CVCTGGAIQCGDFRCPS 2308


>sp|Q65UH7|CMOB_MANSM tRNA (mo5U34)-methyltransferase OS=Mannheimia
           succiniciproducens (strain MBEL55E) GN=cmoB PE=3 SV=1
          Length = 321

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 17/52 (32%), Positives = 26/52 (50%)
 Frame = +2

Query: 155 SQGELHACIYNHKRPVKDTRPSKKGFVSFHAKYQECSWQWEGAGDRALPSIS 310
           SQGE    IY+    +K   P +KG    H  + +C W+ +   DR LP ++
Sbjct: 71  SQGEQQRIIYH----LKQLMPWRKGPYHLHGIHVDCEWRSDFKWDRVLPHLA 118


>sp|P56880|CLD20_HUMAN Claudin-20 OS=Homo sapiens GN=CLDN20 PE=2
           SV=1
          Length = 219

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
 Frame = +1

Query: 130 LTGISMCILPRGTPCMHLQPQKTCKRHSS*QKGICELSCKVPRVFMAVGGSW**SFAFYI 309
           L+ + +C    G  C  L   +  K H+S   G+C         FM+ G S   S  +Y 
Sbjct: 90  LSALGICTSTVGMKCTRLGGDRETKSHASFAGGVC---------FMSAGISSLISTVWYT 140

Query: 310 KTCCGRWL-LTTRKHNPHQP 366
           K     +L LT  + N H+P
Sbjct: 141 KEIIANFLDLTVPESNKHEP 160


>sp|Q5E9M9|MIRO2_BOVIN Mitochondrial Rho GTPase 2 OS=Bos taurus
           GN=RHOT2 PE=2 SV=1
          Length = 618

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 33/109 (30%), Positives = 42/109 (38%), Gaps = 1/109 (0%)
 Frame = +1

Query: 154 LPRGTPCMHLQPQKTCKRHSS*QKGICELSCKVPRVFMAVGGSW**SFAFYIKTCCGRWL 333
           LP G P   L P + C+RH              P +F   G          ++ C G + 
Sbjct: 528 LPGGVPLPGLSPAEFCRRH----------RLPTPTLFSCAGP---------VEPCMGIFT 568

Query: 334 -LTTRKHNPHQPCPQLQPAATFVCLRVKLKTLSLERACLLAASKYWVSV 477
            L T    PH    QLQ  AT   LRV L  +    A +L+ S Y V V
Sbjct: 569 RLATMATFPHLVHGQLQ--ATSFWLRVALGAMGAAVAAILSFSLYRVLV 615


>sp|Q7VBL4|GLGB_PROMA 1,4-alpha-glucan-branching enzyme
           OS=Prochlorococcus marinus GN=glgB PE=3 SV=1
          Length = 755

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 177 HAWSSPWEYAHRYACKTSKGL*VARHFHHLWRR 79
           H  + PW + H +  +  + L    + HH+WRR
Sbjct: 93  HTQNDPWAFRHEWMGEIDRHLFAEGNHHHIWRR 125


>sp|Q3E763|YD246_YEAST Uncharacterized protein YDR246W-A
           OS=Saccharomyces cerevisiae GN=YDR246W-A PE=2 SV=1
          Length = 66

 Score = 30.0 bits (66), Expect = 7.7
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 6/48 (12%)
 Frame = +3

Query: 51  LYHTR*STLLFSTDDGNAL------PLTTLLRSYRHIDVHTPKGNSMH 176
           LY    S  L  +  GN +      P   LLRS+RH+   TP  N +H
Sbjct: 4   LYRHLASFFLLPSCPGNTIQSITSYPANALLRSFRHVSTETPVRNRVH 51
tr_hit_id A3BM43
Definition tr|A3BM43|A3BM43_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica
Align length 96
Score (bit) 34.7
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913937|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_A11.
         (549 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A3BM43|A3BM43_ORYSJ Putative uncharacterized protein OS=Oryza...    35   3.4  
tr|A8I1F8|A8I1F8_9PICO Capsid (Fragment) OS=Seal picornavirus ty...    33   7.5  
tr|A8I1F5|A8I1F5_9PICO Capsid (Fragment) OS=Seal picornavirus ty...    33   7.5  
tr|Q99ND0|Q99ND0_MOUSE ZAN (Zonadhesin) OS=Mus musculus GN=Zan P...    33   9.8  
tr|A1ZE77|A1ZE77_9SPHI Putative uncharacterized protein OS=Micro...    33   9.8  
tr|Q3ZTP2|Q3ZTP2_MACFA Zonadhesin (Fragment) OS=Macaca fascicula...    33   9.8  
tr|Q3ZTN8|Q3ZTN8_MACMU Zonadhesin (Fragment) OS=Macaca mulatta P...    33   9.8  
tr|Q2EG89|Q2EG89_PANTR Zonadhesin variant 6 (Fragment) OS=Pan tr...    33   9.8  
tr|Q2EG66|Q2EG66_PANPA Zonadhesin variant 6 (Fragment) OS=Pan pa...    33   9.8  
tr|Q2EG51|Q2EG51_MACNG Zonadhesin variant 6 (Fragment) OS=Macaca...    33   9.8  
tr|B4DYT6|B4DYT6_HUMAN cDNA FLJ50298, highly similar to Zonadhes...    33   9.8  
tr|A0FKC8|A0FKC8_HUMAN Zonadhesin isoform 6 OS=Homo sapiens GN=Z...    33   9.8  
tr|A4VNC0|A4VNC0_PSEU5 Arsenate reductase OS=Pseudomonas stutzer...    33   10.0 

>tr|A3BM43|A3BM43_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_024115 PE=4 SV=1
          Length = 229

 Score = 34.7 bits (78), Expect = 3.4
 Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
 Frame = -2

Query: 389 AAGCSCGQGWCGLCLRVVSNQRPQQVLI*KAKLYHQLPPTAMNTLGTLHESSQIPFC*DE 210
           A   S   GWC LC   +   +P +++   A+    + P       T+H ++        
Sbjct: 80  AVVASANPGWCDLCQGRI---QPGRLVYRCAECAFDVHPLCTLLPMTIHPAAGC----HG 132

Query: 209 CLLQVFCGCKCMHGVPLGSMHIDMPVRPQ--KGCKW 108
              Q+  G + + GVP G +H+ +PVRP   +G KW
Sbjct: 133 ARPQLGPGARGVRGVPPGLLHLALPVRPMSVQGSKW 168


>tr|A8I1F8|A8I1F8_9PICO Capsid (Fragment) OS=Seal picornavirus type
           1 PE=4 SV=1
          Length = 476

 Score = 33.5 bits (75), Expect = 7.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 161 GELHACIYNHKRPVKDTRPSKKGFVSFHAKYQECSW 268
           G L   +YN  R V  +RP+++GF SF +  + C W
Sbjct: 440 GRLPRNVYNVARRVFSSRPTQQGFASFTSALRACEW 475


>tr|A8I1F5|A8I1F5_9PICO Capsid (Fragment) OS=Seal picornavirus type
           1 PE=4 SV=1
          Length = 476

 Score = 33.5 bits (75), Expect = 7.5
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = +2

Query: 161 GELHACIYNHKRPVKDTRPSKKGFVSFHAKYQECSW 268
           G L   +YN  R V  +RP+++GF SF +  + C W
Sbjct: 440 GRLPRNVYNVARRVFSSRPTQQGFASFTSALRACEW 475


>tr|Q99ND0|Q99ND0_MOUSE ZAN (Zonadhesin) OS=Mus musculus GN=Zan PE=2
            SV=1
          Length = 5374

 Score = 33.1 bits (74), Expect = 9.8
 Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = -2

Query: 215  DECLLQVFCGCKCMHGV--PLGSMHIDMPVRPQKGCKWQGISIICGEEKCTSPCVIEQFC 42
            D+C+L++ CGCK   GV  P G   I+      + C   G +I C   KC S    E +C
Sbjct: 2748 DKCVLRIECGCKDAQGVLIPAGKTWINRGC--TQSCSCMGGAIQCQNFKCPS----EAYC 2801


>tr|A1ZE77|A1ZE77_9SPHI Putative uncharacterized protein
           OS=Microscilla marina ATCC 23134 GN=M23134_04218 PE=4
           SV=1
          Length = 237

 Score = 33.1 bits (74), Expect = 9.8
 Identities = 21/85 (24%), Positives = 34/85 (40%)
 Frame = +2

Query: 140 YRCAYSQGELHACIYNHKRPVKDTRPSKKGFVSFHAKYQECSWQWEGAGDRALPSISKPA 319
           YR  Y  G     +Y     ++  +  KKG      + +E   +W  AG   +P I  P+
Sbjct: 152 YRSQYCYGIKETTVYVPYSQIETLQQHKKGIKLVGRRGEE---KWADAGKVGVPEIILPS 208

Query: 320 AAAGCLLHASIIHTSLVHNYSQQLH 394
           A  G       ++    +NY Q+ H
Sbjct: 209 AMEGYATLCLFLNEVATYNYQQRKH 233


>tr|Q3ZTP2|Q3ZTP2_MACFA Zonadhesin (Fragment) OS=Macaca fascicularis
            PE=2 SV=1
          Length = 1621

 Score = 33.1 bits (74), Expect = 9.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 215  DECLLQVFCGCKCMHG--VPLGSMHIDMPVRPQKGCKWQGISIICGEEKCTS 66
            D+C+ +  CGCK  HG  +PLG   +      +  C   G +I CG+ +C S
Sbjct: 1217 DKCVPRSQCGCKDAHGGSIPLGKSWVSRGCTEK--CVCTGGAIQCGDFRCPS 1266


>tr|Q3ZTN8|Q3ZTN8_MACMU Zonadhesin (Fragment) OS=Macaca mulatta PE=2
            SV=1
          Length = 1621

 Score = 33.1 bits (74), Expect = 9.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 215  DECLLQVFCGCKCMHG--VPLGSMHIDMPVRPQKGCKWQGISIICGEEKCTS 66
            D+C+ +  CGCK  HG  +PLG   +      +  C   G +I CG+ +C S
Sbjct: 1217 DKCVPRSQCGCKDAHGGSIPLGKSWVSRGCTEK--CVCTGGAIQCGDFRCPS 1266


>tr|Q2EG89|Q2EG89_PANTR Zonadhesin variant 6 (Fragment) OS=Pan
            troglodytes GN=ZAN PE=4 SV=1
          Length = 2721

 Score = 33.1 bits (74), Expect = 9.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 215  DECLLQVFCGCKCMHG--VPLGSMHIDMPVRPQKGCKWQGISIICGEEKCTS 66
            D+C+ +  CGCK  HG  +PLG   +      +  C   G +I CG+ +C S
Sbjct: 2259 DKCVPRSQCGCKDAHGGSIPLGKSWVSSGCTEK--CVCTGGAIQCGDFRCPS 2308


>tr|Q2EG66|Q2EG66_PANPA Zonadhesin variant 6 (Fragment) OS=Pan
            paniscus GN=ZAN PE=4 SV=1
          Length = 1861

 Score = 33.1 bits (74), Expect = 9.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 215  DECLLQVFCGCKCMHG--VPLGSMHIDMPVRPQKGCKWQGISIICGEEKCTS 66
            D+C+ +  CGCK  HG  +PLG   +      +  C   G +I CG+ +C S
Sbjct: 1399 DKCVPRSQCGCKDAHGGSIPLGKSWVSSGCTEK--CVCTGGAIQCGDFRCPS 1448


>tr|Q2EG51|Q2EG51_MACNG Zonadhesin variant 6 (Fragment) OS=Macaca
           nigra GN=ZAN PE=4 SV=1
          Length = 403

 Score = 33.1 bits (74), Expect = 9.8
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -2

Query: 215 DECLLQVFCGCKCMHG--VPLGSMHIDMPVRPQKGCKWQGISIICGEEKCTS 66
           D+C+ +  CGCK  HG  +PLG   +      +  C   G +I CG+ +C S
Sbjct: 153 DKCVPRSQCGCKDAHGGSIPLGKSWVSRGCTEK--CVCTGGAIQCGDFRCPS 202