| BP913938 |
| Clone id |
YMU001_000038_A12 |
| Library |
YMU01 |
| Length |
560 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000038_A12. |
| Accession |
BP913938 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL4117Contig1 |
| Sequence |
CAAACGCTCTCCAATCTTTGGCCCCGTCGACTGATTGCCATCACGGCCACCCAATGGCGA
ATCATTCACACCAAAAGTCATGGAAATGGTAGGAGGGTCCATAATTGTAGCTGGTAATGG
AGTAGTTATCTCCACAGCAGAAACAGTATGGCCGATAGAAGGATTTGACAGCCCACAAAG
TGAAACAATATCCCCTGCCCCAGCTGAATCCACAGGAACAATGGTTGTGCCCCTCTTTTT
CATAAGTCTTCACCACCTTTCCCACTTCAATCACCTCCCCCCCTGAACCTTTCACACGAA
GCCCGTGCACTCTCTCTCCCACTCGCACTTGTCCTGAAGCAATGCGTCCAGTCAATATTC
GACCAAAATAATTATCCCGCTCCATCATAGACACCAGCATCTGAAAAGGAGCTTTTAAAT
CTCCCTTCGGTGGGGGTACAAATTTCAAAACTGCATCAAGTAAAGGAGCCATATTTCTTT
CCTCCTCTTTCGGCACTTATACAAATGTCCGAGATGCCCATCCTTCTTTAGCTGAAGCAT
ACAGTACTGGAAATTCTAGA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
O07631 |
| Definition |
sp|O07631|TYPA_BACSU GTP-binding protein typA/bipA homolog OS=Bacillus subtilis |
| Align length |
78 |
| Score (bit) |
69.3 |
| E-value |
4.0e-26 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913938|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_A12.
(560 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O07631|TYPA_BACSU GTP-binding protein typA/bipA homolog OS=Ba... 69 4e-26
sp|Q9ZLZ3|TYPA_HELPJ GTP-binding protein TypA/BipA homolog OS=He... 69 1e-22
sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog OS=He... 69 6e-22
sp|P72749|TYPA_SYNY3 GTP-binding protein TypA/BipA homolog OS=Sy... 64 6e-22
sp|P44910|TYPA_HAEIN GTP-binding protein typA/bipA homolog OS=Ha... 65 2e-21
sp|Q8K9C8|TYPA_BUCAP GTP-binding protein TypA/BipA homolog OS=Bu... 60 1e-20
sp|P0A3B4|TYPA_SHIFL GTP-binding protein typA/bipA OS=Shigella f... 60 8e-20
sp|P32132|TYPA_ECOLI GTP-binding protein typA/BipA OS=Escherichi... 60 8e-20
sp|P0A3B1|TYPA_ECOL6 GTP-binding protein typA/bipA OS=Escherichi... 60 8e-20
sp|P0A3B3|TYPA_ECO57 GTP-binding protein typA/bipA OS=Escherichi... 60 8e-20
sp|P0A3B2|TYPA_ECO27 GTP-binding protein typA/bipA OS=Escherichi... 60 8e-20
sp|P57508|TYPA_BUCAI GTP-binding protein TypA/BipA homolog OS=Bu... 58 2e-19
sp|Q89AC9|TYPA_BUCBP GTP-binding protein TypA/BipA homolog OS=Bu... 57 3e-18
sp|Q67S76|LEPA_SYMTH GTP-binding protein lepA OS=Symbiobacterium... 52 3e-06
sp|A0L631|LEPA_MAGSM GTP-binding protein lepA OS=Magnetococcus s... 51 4e-06
sp|Q9X1V8|LEPA_THEMA GTP-binding protein lepA OS=Thermotoga mari... 50 6e-06
sp|Q088A4|EFG2_SHEFN Elongation factor G 2 OS=Shewanella frigidi... 41 7e-06
sp|Q1LTI1|LEPA_BAUCH GTP-binding protein lepA OS=Baumannia cicad... 48 3e-05
sp|Q2RKX8|LEPA_MOOTA GTP-binding protein lepA OS=Moorella thermo... 48 4e-05
sp|Q0SP76|LEPA_BORAP GTP-binding protein lepA OS=Borrelia afzeli... 48 4e-05
sp|Q044A7|LEPA_LACGA GTP-binding protein lepA OS=Lactobacillus g... 47 5e-05
sp|Q12JZ0|EFG2_SHEDO Elongation factor G 2 OS=Shewanella denitri... 42 6e-05
sp|O51115|LEPA_BORBU GTP-binding protein lepA OS=Borrelia burgdo... 47 6e-05
sp|A8MFA6|LEPA_ALKOO GTP-binding protein lepA OS=Alkaliphilus or... 47 6e-05
sp|A1SSM6|LEPA_PSYIN GTP-binding protein lepA OS=Psychromonas in... 47 8e-05
sp|Q1QX26|LEPA_CHRSD GTP-binding protein lepA OS=Chromohalobacte... 47 8e-05
sp|A1VEB9|EFG_DESVV Elongation factor G OS=Desulfovibrio vulgari... 33 1e-04
sp|Q72CI3|EFG_DESVH Elongation factor G OS=Desulfovibrio vulgari... 33 1e-04
sp|A1U2V8|LEPA_MARAV GTP-binding protein lepA OS=Marinobacter aq... 46 1e-04
sp|Q5WVI1|LEPA_LEGPL GTP-binding protein lepA OS=Legionella pneu... 46 1e-04
>sp|O07631|TYPA_BACSU GTP-binding protein typA/bipA homolog
OS=Bacillus subtilis GN=typA PE=3 SV=1
Length = 612
Score = 69.3 bits (168), Expect(2) = 4e-26
Identities = 34/78 (43%), Positives = 49/78 (62%)
Frame = -3
Query: 234 RGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFGVNDSP 55
+G V ++ A AGD+V++ G+ + ++G TV V+ PLP +D PT+ MTF VN+SP
Sbjct: 260 QGLKRVEIEEAKAGDLVAVSGMEDINVGETVCPVDHQDPLPVLRIDEPTLQMTFVVNNSP 319
Query: 54 LGGRDGNQSTGPKIGERL 1
GR+G T KI ERL
Sbjct: 320 FAGREGKYVTARKIEERL 337
Score = 68.2 bits (165), Expect(2) = 4e-26
Identities = 34/84 (40%), Positives = 54/84 (64%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
LEFPV+YASA G AS PK+++ NM L + ++K VP P + + P Q V++++
Sbjct: 160 LEFPVVYASAINGTASLD----PKQQDENMEALYETIIKHVPAPVDNAEEPLQFQVALLD 215
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
++Y GRI GR+ G ++VG++V
Sbjct: 216 YNDYVGRIGIGRVFRGTMKVGQQV 239
>sp|Q9ZLZ3|TYPA_HELPJ GTP-binding protein TypA/BipA homolog
OS=Helicobacter pylori J99 GN=typA PE=3 SV=1
Length = 599
Score = 69.3 bits (168), Expect(2) = 1e-22
Identities = 31/84 (36%), Positives = 54/84 (64%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FPV+YA+A++G+A ++ +E++N+ PL + +L+ VP P G + P QM + ++
Sbjct: 157 LDFPVVYAAARDGYAMKSL----DDEKKNLEPLFETILEHVPSPSGSVDEPLQMQIFTLD 212
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
DNY G+I R+ +G V+ E V
Sbjct: 213 YDNYVGKIGIARVFNGSVKKNESV 236
Score = 56.2 bits (134), Expect(2) = 1e-22
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Frame = -3
Query: 231 GTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIM--DPPTISMTFGVNDS 58
G +++A AGDIV+L G + +G +V V+ T P+P M + PT+S+ F VNDS
Sbjct: 258 GLARTEIENAYAGDIVALAGFNAMDVGDSV--VDPTNPMPLDPMHLEEPTMSVYFAVNDS 315
Query: 57 PLGGRDGNQSTGPKIGERL 1
PL G +G T K+ +RL
Sbjct: 316 PLAGLEGKHVTANKLKDRL 334
>sp|O25225|TYPA_HELPY GTP-binding protein TypA/BipA homolog
OS=Helicobacter pylori GN=typA PE=3 SV=1
Length = 599
Score = 69.3 bits (168), Expect(2) = 6e-22
Identities = 31/84 (36%), Positives = 54/84 (64%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FPV+YA+A++G+A ++ +E++N+ PL + +L+ VP P G + P QM + ++
Sbjct: 157 LDFPVVYAAARDGYAMKSL----DDEKKNLEPLFETILEHVPSPSGSVDEPLQMQIFTLD 212
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
DNY G+I R+ +G V+ E V
Sbjct: 213 YDNYVGKIGIARVFNGSVKKNESV 236
Score = 54.3 bits (129), Expect(2) = 6e-22
Identities = 28/77 (36%), Positives = 43/77 (55%)
Frame = -3
Query: 231 GTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFGVNDSPL 52
G +++A AGDIV++ G + +G +V PL ++ PT+S+ F VNDSPL
Sbjct: 258 GLARTEIENAYAGDIVAIAGFNAMDVGDSVVDPANPMPLDPMHLEEPTMSVYFAVNDSPL 317
Query: 51 GGRDGNQSTGPKIGERL 1
G +G T K+ +RL
Sbjct: 318 AGLEGKHVTANKLKDRL 334
>sp|P72749|TYPA_SYNY3 GTP-binding protein TypA/BipA homolog
OS=Synechocystis sp. (strain PCC 6803) GN=typA PE=3 SV=1
Length = 597
Score = 63.5 bits (153), Expect(2) = 6e-22
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = -2
Query: 556 EFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMMER 377
+F L+AS G+A + ++ +M PL +A+L VPPP GD P Q+ V+ ++
Sbjct: 159 DFTTLFASGLGGFAKESL----DDDSEDMKPLFEAILHHVPPPAGDPNKPLQLQVTTLDY 214
Query: 376 DNYFGRILTGRIASGQVRVGER 311
+Y GRI+ GRI +G V+ G++
Sbjct: 215 SDYLGRIIIGRIHNGTVKAGQQ 236
Score = 60.1 bits (144), Expect(2) = 6e-22
Identities = 30/83 (36%), Positives = 48/83 (57%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+L+ G + + A AG IV++ G ++ +IG T++ + LP +D PT+ MTF
Sbjct: 253 KLLGFEGLNRIELPEASAGYIVAIAGFADANIGETLTCPDEPQALPLIKVDEPTLQMTFS 312
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
VNDSP G++G T +I +RL
Sbjct: 313 VNDSPFAGQEGKFVTSRQIRDRL 335
>sp|P44910|TYPA_HAEIN GTP-binding protein typA/bipA homolog
OS=Haemophilus influenzae GN=typA PE=1 SV=1
Length = 616
Score = 65.5 bits (158), Expect(2) = 2e-21
Identities = 34/84 (40%), Positives = 51/84 (60%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP++YASA G A ++ +M PL +A++K V PPK +L APFQM +S ++
Sbjct: 164 LDFPIIYASALNGVAGLEH----EDLAEDMTPLFEAIVKHVEPPKVELDAPFQMQISQLD 219
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
+NY G I GRI G ++ + V
Sbjct: 220 YNNYVGVIGIGRIKRGSIKPNQPV 243
Score = 56.6 bits (135), Expect(2) = 2e-21
Identities = 29/70 (41%), Positives = 41/70 (58%)
Frame = -3
Query: 210 DSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFGVNDSPLGGRDGNQ 31
D A AGDIV++ GL +I T+ + LP+ +D PT++M F VN SP G++G
Sbjct: 272 DVAYAGDIVAITGLGELNISDTICDINTVEALPSLTVDEPTVTMFFCVNTSPFAGQEGKY 331
Query: 30 STGPKIGERL 1
T +I ERL
Sbjct: 332 VTSRQILERL 341
>sp|Q8K9C8|TYPA_BUCAP GTP-binding protein TypA/BipA homolog
OS=Buchnera aphidicola subsp. Schizaphis graminum
GN=typA PE=3 SV=1
Length = 609
Score = 59.7 bits (143), Expect(2) = 1e-20
Identities = 29/84 (34%), Positives = 48/84 (57%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP++Y SA G + ++ + + NM PL +A++K+ P P D FQM +S ++
Sbjct: 158 LDFPIIYTSAILGTSGINYL----DMKENMIPLYEAIIKYAPAPNVDPNQKFQMQISQLD 213
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
+NY G I GRI G ++ + V
Sbjct: 214 YNNYLGVIGVGRIKQGHIKPNDSV 237
Score = 59.3 bits (142), Expect(2) = 1e-20
Identities = 29/77 (37%), Positives = 44/77 (57%)
Frame = -3
Query: 231 GTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFGVNDSPL 52
G + + AGDI+++ GL+ +I T+ + PLP I+D PT++M F VN SP
Sbjct: 259 GLKRLEIQKGDAGDIIAITGLNKLNISDTICHPDNLCPLPPLIIDEPTVNMFFSVNTSPF 318
Query: 51 GGRDGNQSTGPKIGERL 1
G++G T +I ERL
Sbjct: 319 SGKEGKYITSRQILERL 335
>sp|P0A3B4|TYPA_SHIFL GTP-binding protein typA/bipA OS=Shigella
flexneri GN=typA PE=3 SV=1
Length = 607
Score = 59.7 bits (143), Expect(2) = 8e-20
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP++YASA G A ++ +M PL A++ VP P DL PFQM +S ++
Sbjct: 158 LDFPIVYASALNGIAGLDH----EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLD 213
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
++Y G I GRI G+V+ ++V
Sbjct: 214 YNSYVGVIGIGRIKRGKVKPNQQV 237
Score = 56.6 bits (135), Expect(2) = 8e-20
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = -3
Query: 231 GTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFGVNDSPL 52
G + D A AGDIV++ GL +I TV + LPA +D PT+SM F VN SP
Sbjct: 259 GLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPF 318
Query: 51 GGRDGNQSTGPKIGERL 1
G++G T +I +RL
Sbjct: 319 CGKEGKFVTSRQILDRL 335
>sp|P32132|TYPA_ECOLI GTP-binding protein typA/BipA OS=Escherichia
coli (strain K12) GN=typA PE=1 SV=2
Length = 607
Score = 59.7 bits (143), Expect(2) = 8e-20
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP++YASA G A ++ +M PL A++ VP P DL PFQM +S ++
Sbjct: 158 LDFPIVYASALNGIAGLDH----EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLD 213
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
++Y G I GRI G+V+ ++V
Sbjct: 214 YNSYVGVIGIGRIKRGKVKPNQQV 237
Score = 56.6 bits (135), Expect(2) = 8e-20
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = -3
Query: 231 GTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFGVNDSPL 52
G + D A AGDIV++ GL +I TV + LPA +D PT+SM F VN SP
Sbjct: 259 GLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPF 318
Query: 51 GGRDGNQSTGPKIGERL 1
G++G T +I +RL
Sbjct: 319 CGKEGKFVTSRQILDRL 335
>sp|P0A3B1|TYPA_ECOL6 GTP-binding protein typA/bipA OS=Escherichia
coli O6 GN=typA PE=3 SV=1
Length = 607
Score = 59.7 bits (143), Expect(2) = 8e-20
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP++YASA G A ++ +M PL A++ VP P DL PFQM +S ++
Sbjct: 158 LDFPIVYASALNGIAGLDH----EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLD 213
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
++Y G I GRI G+V+ ++V
Sbjct: 214 YNSYVGVIGIGRIKRGKVKPNQQV 237
Score = 56.6 bits (135), Expect(2) = 8e-20
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = -3
Query: 231 GTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFGVNDSPL 52
G + D A AGDIV++ GL +I TV + LPA +D PT+SM F VN SP
Sbjct: 259 GLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPF 318
Query: 51 GGRDGNQSTGPKIGERL 1
G++G T +I +RL
Sbjct: 319 CGKEGKFVTSRQILDRL 335
>sp|P0A3B3|TYPA_ECO57 GTP-binding protein typA/bipA OS=Escherichia
coli O157:H7 GN=typA PE=3 SV=1
Length = 607
Score = 59.7 bits (143), Expect(2) = 8e-20
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP++YASA G A ++ +M PL A++ VP P DL PFQM +S ++
Sbjct: 158 LDFPIVYASALNGIAGLDH----EDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLD 213
Query: 379 RDNYFGRILTGRIASGQVRVGERV 308
++Y G I GRI G+V+ ++V
Sbjct: 214 YNSYVGVIGIGRIKRGKVKPNQQV 237
Score = 56.6 bits (135), Expect(2) = 8e-20
Identities = 32/77 (41%), Positives = 43/77 (55%)
Frame = -3
Query: 231 GTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFGVNDSPL 52
G + D A AGDIV++ GL +I TV + LPA +D PT+SM F VN SP
Sbjct: 259 GLERIETDLAEAGDIVAITGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPF 318
Query: 51 GGRDGNQSTGPKIGERL 1
G++G T +I +RL
Sbjct: 319 CGKEGKFVTSRQILDRL 335
|
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9SXF4 |
| Definition |
tr|A9SXF4|A9SXF4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
| Align length |
83 |
| Score (bit) |
131.0 |
| E-value |
9.0e-58 |
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913938|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_A12.
(560 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9SXF4|A9SXF4_PHYPA Predicted protein OS=Physcomitrella paten... 131 9e-58
tr|Q682V3|Q682V3_ARATH Putative GTP-binding protein OS=Arabidops... 120 1e-55
tr|O82278|O82278_ARATH Putative GTP-binding protein OS=Arabidops... 120 1e-55
tr|B3LF44|B3LF44_ARATH At2g31060 OS=Arabidopsis thaliana PE=2 SV=1 120 1e-55
tr|Q56YJ4|Q56YJ4_ARATH Putative GTP-binding protein OS=Arabidops... 120 9e-55
tr|A9H9C1|A9H9C1_GLUDA GTP-binding protein TypA OS=Gluconacetoba... 88 3e-34
tr|Q1NFC8|Q1NFC8_9SPHN GTP-binding protein TypA OS=Sphingomonas ... 85 2e-33
tr|Q1GQR0|Q1GQR0_SPHAL GTP-binding protein TypA OS=Sphingopyxis ... 83 8e-33
tr|Q5FT83|Q5FT83_GLUOX GTP-binding protein OS=Gluconobacter oxyd... 84 2e-32
tr|Q0BQ84|Q0BQ84_GRABC GTP-binding protein TypA/BipA OS=Granulib... 84 2e-32
tr|A5FY36|A5FY36_ACICJ GTP-binding protein TypA OS=Acidiphilium ... 84 1e-31
tr|A5V2W7|A5V2W7_SPHWW GTP-binding protein TypA OS=Sphingomonas ... 82 2e-31
tr|Q5PAJ9|Q5PAJ9_ANAMM GTP-binding protein OS=Anaplasma marginal... 81 3e-31
tr|A8JAY4|A8JAY4_CHLRE Elongation factor-like protein (Fragment)... 81 4e-31
tr|Q2GKP7|Q2GKP7_ANAPZ GTP-binding protein TypA OS=Anaplasma pha... 81 8e-31
tr|Q2G595|Q2G595_NOVAD GTP-binding protein TypA OS=Novosphingobi... 80 1e-30
tr|Q5NMG5|Q5NMG5_ZYMMO Membrane GTPase OS=Zymomonas mobilis GN=Z... 79 1e-30
tr|A4U308|A4U308_9PROT Membrane GTPase involved in stress respon... 81 2e-30
tr|Q4UKQ8|Q4UKQ8_RICFE GTP-binding protein TypA OS=Rickettsia fe... 79 4e-30
tr|Q68XA7|Q68XA7_RICTY GTP-binding protein TypA (Tyrosine phosph... 81 6e-30
tr|Q9ZDR2|Q9ZDR2_RICPR Putative uncharacterized protein RP263 OS... 81 1e-29
tr|Q92IS1|Q92IS1_RICCN GTP-binding protein OS=Rickettsia conorii... 77 1e-29
tr|A8F125|A8F125_RICM5 GTP-binding protein TypA OS=Rickettsia ma... 77 1e-29
tr|Q7PB82|Q7PB82_RICSI GTP-binding protein OS=Rickettsia sibiric... 77 1e-29
tr|A8EY14|A8EY14_RICCK GTP-binding protein OS=Rickettsia canaden... 80 2e-29
tr|A1B997|A1B997_PARDP GTP-binding protein TypA OS=Paracoccus de... 90 2e-29
tr|Q2N8U5|Q2N8U5_ERYLH Membrane GTPase OS=Erythrobacter litorali... 80 3e-29
tr|Q3J0R4|Q3J0R4_RHOS4 EF-Tu; elongation factor Tu OS=Rhodobacte... 87 3e-29
tr|A3PLI8|A3PLI8_RHOS1 GTP-binding protein TypA OS=Rhodobacter s... 87 3e-29
tr|B6IYB4|B6IYB4_RHOCS GTP-binding protein TypA OS=Rhodospirillu... 79 4e-29
>tr|A9SXF4|A9SXF4_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_216713 PE=4 SV=1
Length = 668
Score = 131 bits (330), Expect(2) = 9e-58
Identities = 64/83 (77%), Positives = 71/83 (85%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+LMKK G T V V+SAGAGDIVS+ GLS PSIGHTV+AV++T LPA MDPPT+SMTF
Sbjct: 314 KLMKKNGMTSVLVNSAGAGDIVSIAGLSEPSIGHTVAAVDVTEALPAAAMDPPTLSMTFS 373
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
VNDSPLGGRDGNQ TGPKIGERL
Sbjct: 374 VNDSPLGGRDGNQLTGPKIGERL 396
Score = 115 bits (288), Expect(2) = 9e-58
Identities = 55/92 (59%), Positives = 73/92 (79%), Gaps = 4/92 (4%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEER----NMAPLLDAVLKFVPPPKGDLKAPFQMLV 392
LEFPVLYASAK GW SRT+ K E+ +MAPL++ + + +PPPKGDL +PF++LV
Sbjct: 209 LEFPVLYASAKMGWVSRTYT---KGEDAGFQCSMAPLMETIAEHIPPPKGDLSSPFKLLV 265
Query: 391 SMMERDNYFGRILTGRIASGQVRVGERVHGLR 296
SMM+ D+Y GR++TGRI+SG VRVG+R+HGLR
Sbjct: 266 SMMDHDSYLGRLVTGRISSGVVRVGDRIHGLR 297
>tr|Q682V3|Q682V3_ARATH Putative GTP-binding protein OS=Arabidopsis
thaliana GN=At2g31060 PE=2 SV=1
Length = 667
Score = 120 bits (301), Expect(2) = 1e-55
Identities = 55/83 (66%), Positives = 69/83 (83%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+LMKK+GTTIV +D+AGAGDI+ + GL+ PSIGHTV++ E+TT LP +DPPTISMTFG
Sbjct: 314 KLMKKKGTTIVSIDAAGAGDIICMAGLTAPSIGHTVASAEVTTALPTVELDPPTISMTFG 373
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
VNDSPL G+DG TG +IG+RL
Sbjct: 374 VNDSPLAGQDGTHLTGGRIGDRL 396
Score = 119 bits (298), Expect(2) = 1e-55
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FPVLYASAKEGWAS T+ P + +NMA LLDAV++ V PPK +L PF MLVSMME
Sbjct: 211 LDFPVLYASAKEGWASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMME 270
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGLR 296
+D Y GRILTGR+ SG VRVG+RV+GLR
Sbjct: 271 KDFYLGRILTGRVTSGVVRVGDRVNGLR 298
>tr|O82278|O82278_ARATH Putative GTP-binding protein OS=Arabidopsis
thaliana GN=At2g31060 PE=4 SV=1
Length = 664
Score = 120 bits (301), Expect(2) = 1e-55
Identities = 55/83 (66%), Positives = 69/83 (83%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+LMKK+GTTIV +D+AGAGDI+ + GL+ PSIGHTV++ E+TT LP +DPPTISMTFG
Sbjct: 311 KLMKKKGTTIVSIDAAGAGDIICMAGLTAPSIGHTVASAEVTTALPTVELDPPTISMTFG 370
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
VNDSPL G+DG TG +IG+RL
Sbjct: 371 VNDSPLAGQDGTHLTGGRIGDRL 393
Score = 119 bits (298), Expect(2) = 1e-55
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FPVLYASAKEGWAS T+ P + +NMA LLDAV++ V PPK +L PF MLVSMME
Sbjct: 208 LDFPVLYASAKEGWASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMME 267
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGLR 296
+D Y GRILTGR+ SG VRVG+RV+GLR
Sbjct: 268 KDFYLGRILTGRVTSGVVRVGDRVNGLR 295
>tr|B3LF44|B3LF44_ARATH At2g31060 OS=Arabidopsis thaliana PE=2 SV=1
Length = 527
Score = 120 bits (301), Expect(2) = 1e-55
Identities = 55/83 (66%), Positives = 69/83 (83%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+LMKK+GTTIV +D+AGAGDI+ + GL+ PSIGHTV++ E+TT LP +DPPTISMTFG
Sbjct: 174 KLMKKKGTTIVSIDAAGAGDIICMAGLTAPSIGHTVASAEVTTALPTVELDPPTISMTFG 233
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
VNDSPL G+DG TG +IG+RL
Sbjct: 234 VNDSPLAGQDGTHLTGGRIGDRL 256
Score = 119 bits (298), Expect(2) = 1e-55
Identities = 59/88 (67%), Positives = 70/88 (79%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FPVLYASAKEGWAS T+ P + +NMA LLDAV++ V PPK +L PF MLVSMME
Sbjct: 71 LDFPVLYASAKEGWASSTYTKDPPVDAKNMADLLDAVVRHVQPPKANLDEPFLMLVSMME 130
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGLR 296
+D Y GRILTGR+ SG VRVG+RV+GLR
Sbjct: 131 KDFYLGRILTGRVTSGVVRVGDRVNGLR 158
>tr|Q56YJ4|Q56YJ4_ARATH Putative GTP-binding protein OS=Arabidopsis
thaliana GN=At2g31060 PE=2 SV=1
Length = 668
Score = 120 bits (301), Expect(2) = 9e-55
Identities = 55/83 (66%), Positives = 69/83 (83%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+LMKK+GTTIV +D+AGAGDI+ + GL+ PSIGHTV++ E+TT LP +DPPTISMTFG
Sbjct: 315 KLMKKKGTTIVSIDAAGAGDIICMAGLTAPSIGHTVASAEVTTALPTVELDPPTISMTFG 374
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
VNDSPL G+DG TG +IG+RL
Sbjct: 375 VNDSPLAGQDGTHLTGGRIGDRL 397
Score = 116 bits (291), Expect(2) = 9e-55
Identities = 58/88 (65%), Positives = 69/88 (78%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FPVLYASAKEGWAS T+ P + +NMA LL AV++ V PPK +L PF MLVSMME
Sbjct: 212 LDFPVLYASAKEGWASSTYTKDPPVDAKNMADLLGAVVRHVQPPKANLDEPFLMLVSMME 271
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGLR 296
+D Y GRILTGR+ SG VRVG+RV+GLR
Sbjct: 272 KDFYLGRILTGRVTSGVVRVGDRVNGLR 299
>tr|A9H9C1|A9H9C1_GLUDA GTP-binding protein TypA
OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 /
DSM 5601 / PAl5) GN=typA PE=4 SV=1
Length = 607
Score = 88.2 bits (217), Expect(2) = 3e-34
Identities = 43/83 (51%), Positives = 60/83 (72%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+L+ RG VPV+ A AGDIV++ GLS +I T+++ EIT PL +T +DPPT+SMTF
Sbjct: 252 KLLSFRGLERVPVEEAEAGDIVAVAGLSEATIPETIASPEITEPLASTPVDPPTLSMTFR 311
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
+ND PLGGR+G + T +I +RL
Sbjct: 312 LNDGPLGGREGKKVTSRQIRDRL 334
Score = 80.5 bits (197), Expect(2) = 3e-34
Identities = 35/88 (39%), Positives = 58/88 (65%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP+L+AS ++GWA + +++AP+ D +++ VPPP+ D APF M+ +++E
Sbjct: 156 LDFPMLFASGRQGWADEEL----EGARKDLAPMFDLIVRHVPPPQVDKDAPFAMVATILE 211
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGLR 296
DN+ GR+LTGR+ G+ +V V LR
Sbjct: 212 NDNFLGRVLTGRVEQGRAKVNMPVRVLR 239
>tr|Q1NFC8|Q1NFC8_9SPHN GTP-binding protein TypA OS=Sphingomonas sp.
SKA58 GN=SKA58_14842 PE=4 SV=1
Length = 606
Score = 84.7 bits (208), Expect(2) = 2e-33
Identities = 39/87 (44%), Positives = 57/87 (65%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FPVLYAS + G+AS P+ E + P+ ++ VPPP D APF LV++++
Sbjct: 156 LDFPVLYASGRNGYASED----PQRREGTLEPMFQKIVDHVPPPALDEDAPFSFLVTLLD 211
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGL 299
RDN+ GRILTGR+ SG ++V + +H L
Sbjct: 212 RDNFLGRILTGRVQSGTLKVNQPIHAL 238
Score = 80.9 bits (198), Expect(2) = 2e-33
Identities = 37/83 (44%), Positives = 58/83 (69%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+++ RG VPVD A AGDI+SL GL+ ++ +T++ +++ P+ A +DPPT+SM F
Sbjct: 252 KILSFRGLDRVPVDEAKAGDIISLAGLTVATVANTIADPQVSEPIKAQPIDPPTLSMRFA 311
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
VNDSP+ GR+G++ T I +RL
Sbjct: 312 VNDSPMAGREGSKVTSRMIRDRL 334
>tr|Q1GQR0|Q1GQR0_SPHAL GTP-binding protein TypA OS=Sphingopyxis
alaskensis GN=Sala_2303 PE=4 SV=1
Length = 610
Score = 82.8 bits (203), Expect(2) = 8e-33
Identities = 40/93 (43%), Positives = 62/93 (66%)
Frame = -3
Query: 279 GR*LKWERW*RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIM 100
G+ ++ R +L+ RG VPVD A AGDIV++ GL+ ++ +T++ +T P+ A +
Sbjct: 246 GKVIETGRASKLLAFRGLDRVPVDEAKAGDIVAIAGLAQATVANTIADTSVTEPIAAQPI 305
Query: 99 DPPTISMTFGVNDSPLGGRDGNQSTGPKIGERL 1
DPPT+SM F VNDSP+ GR+G++ T I +RL
Sbjct: 306 DPPTLSMRFAVNDSPMAGREGSKVTSRMIRDRL 338
Score = 80.9 bits (198), Expect(2) = 8e-33
Identities = 37/87 (42%), Positives = 57/87 (65%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP+LYAS + G+AS P+ + + PL + +++ VP P D APF L ++++
Sbjct: 160 LDFPILYASGRGGYASPD----PEARDGTLEPLFETIVRHVPAPGLDENAPFTFLATLLD 215
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGL 299
RDN+ GRILTGR+ SG V+V + +H L
Sbjct: 216 RDNFIGRILTGRVQSGSVKVNQPIHAL 242
>tr|Q5FT83|Q5FT83_GLUOX GTP-binding protein OS=Gluconobacter oxydans
GN=GOX0636 PE=4 SV=1
Length = 606
Score = 83.6 bits (205), Expect(2) = 2e-32
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+L+ RG VPV+ A AGDIV++ GLS +I T++ + PLP+ +DPPT+SMTF
Sbjct: 252 KLLSFRGLDRVPVEEAEAGDIVAVAGLSEATIPDTIADPSVEEPLPSRPVDPPTLSMTFR 311
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
+ND PLGGR+G + T +I +RL
Sbjct: 312 INDGPLGGREGKKVTSRQIRDRL 334
Score = 78.6 bits (192), Expect(2) = 2e-32
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FP+LYAS ++GWA ++++APL D VL+ VP P D APF M+ +++E
Sbjct: 156 LDFPMLYASGRQGWADLEL----DGPKKDLAPLFDLVLRHVPTPNVDKDAPFGMVSTILE 211
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGLR 296
DN+ GRILTGRI G+ +V V LR
Sbjct: 212 SDNFLGRILTGRIDQGRAKVNMPVRVLR 239
>tr|Q0BQ84|Q0BQ84_GRABC GTP-binding protein TypA/BipA
OS=Granulibacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1) GN=GbCGDNIH1_2120 PE=4 SV=1
Length = 605
Score = 83.6 bits (205), Expect(2) = 2e-32
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = -3
Query: 249 RLMKKRGTTIVPVDSAGAGDIVSLCGLSNPSIGHTVSAVEITTPLPATIMDPPTISMTFG 70
+LM RG VPV+ A AGDI+++ GLS+ ++ T+ A E+ PL A +DPPT++MTF
Sbjct: 252 KLMSFRGLDRVPVEEAEAGDIIAIAGLSDTTVPETIGAPELEAPLVAIPVDPPTLAMTFR 311
Query: 69 VNDSPLGGRDGNQSTGPKIGERL 1
VND PL GR+G + T +I +RL
Sbjct: 312 VNDGPLAGREGKKVTSRQIRDRL 334
Score = 78.6 bits (192), Expect(2) = 2e-32
Identities = 37/88 (42%), Positives = 56/88 (63%)
Frame = -2
Query: 559 LEFPVLYASAKEGWASRTFV*VPKEEERNMAPLLDAVLKFVPPPKGDLKAPFQMLVSMME 380
L+FPVLYAS ++GWA + + N+ P+ D +L+ V P+ D +APF M+ S++E
Sbjct: 156 LDFPVLYASGRQGWADESL----EGARENLNPMFDLILRHVAAPQLDKEAPFAMVASILE 211
Query: 379 RDNYFGRILTGRIASGQVRVGERVHGLR 296
DN+ GRILTGR+ G+ ++ V LR
Sbjct: 212 YDNFLGRILTGRVEQGRAKLNMPVKALR 239
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