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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913949
Clone id YMU001_000038_B11
Library
Length 349
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_B11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTGCAAATCCATAGGAGTAAGGAACATGCAATGCCTGCAAACCGTCCTTTAAGACCTTGA
GAATGCCTTCAAGTCTATCTGTAAGTCCACTTAGCCAATCCCGATTCGTTGTCTGCACGG
TGTCAGCCACTGAGGCATCAGTAGAAACTGCAGCATCTGCAATGGTGTAAAGGAGGCCCT
CAGCTTTTTCAACAAGCTGGGGCAGACCTGTGGAAATGAATTCTGAGGTTGCCTCTATGT
GACTATCAAATTCTGCAAAGCTAGCCCGAACTGCAAGCATCCCGACACCATGGAAGCAGC
ACCTGCTTCTTCCGCTGTCGCTATGAAAAGGTTCGAAATGATACCTGCG
■■Homology search results ■■ -
sp_hit_id Q9FYL3
Definition sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic OS=Arabidopsis thaliana
Align length 68
Score (bit) 59.3
E-value 6.0e-09
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913949|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_B11.
         (349 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic OS=A...    59   6e-09
sp|Q9FY06|PPF1_PEA Inner membrane protein PPF-1, chloroplastic O...    55   8e-08
sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplast...    51   2e-06
sp|Q8S339|ALB31_CHLRE Inner membrane ALBINO3-like protein 1, chl...    42   0.001
sp|Q8LKI3|ALB32_CHLRE Inner membrane ALBINO3-like protein 2, chl...    32   0.97 
sp|Q63ZR6|UD3A1_XENLA UDP-glucuronosyltransferase 3A1 OS=Xenopus...    31   2.2  
sp|P36165|TGL4_YEAST Lipase 4 OS=Saccharomyces cerevisiae GN=TGL...    30   2.8  
sp|P54937|GUNA_CLOLO Endoglucanase A OS=Clostridium longisporum ...    29   8.3  

>sp|Q9FYL3|ALB31_ARATH ALBINO3-like protein 1, chloroplastic
           OS=Arabidopsis thaliana GN=ALB3L1 PE=2 SV=3
          Length = 499

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
 Frame = -1

Query: 190 EKAEGLLYTIXXXXXXXXXXXXXXVQTTNR-----DWLSGLTDRLEGILKVLKDGLQALH 26
           + AE LLYTI                TT +     DW SG+ + +E ILKVLKDGL  +H
Sbjct: 60  DHAENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLKDGLSTVH 119

Query: 25  VPYSYGFA 2
           VPYSYGFA
Sbjct: 120 VPYSYGFA 127


>sp|Q9FY06|PPF1_PEA Inner membrane protein PPF-1, chloroplastic
           OS=Pisum sativum GN=PPF-1 PE=2 SV=2
          Length = 442

 Score = 55.5 bits (132), Expect = 8e-08
 Identities = 31/72 (43%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
 Frame = -1

Query: 214 STGLPQLVEKAEGLLYTIXXXXXXXXXXXXXXVQTT-NRDWLSGLTDRLEGILKVLKDGL 38
           S  L  +  +AEGLLYT+              V    N  W   ++D +E +LKVLKDGL
Sbjct: 50  SVDLSGIFARAEGLLYTLADATVAADAAASTDVAAQKNGGWFGFISDGMEFVLKVLKDGL 109

Query: 37  QALHVPYSYGFA 2
            ++HVPYSYGFA
Sbjct: 110 SSVHVPYSYGFA 121


>sp|Q8LBP4|ALB3_ARATH Inner membrane protein ALBINO3, chloroplastic
           OS=Arabidopsis thaliana GN=ALB3 PE=1 SV=2
          Length = 462

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
 Frame = -1

Query: 214 STGLPQLVEKAEGLLYTIXXXXXXXXXXXXXXVQTT---NRDWLSGLTDRLEGILKVLKD 44
           S  +  +  +AE LLYTI                +    +  W   ++D +E +LK+LKD
Sbjct: 70  SVDIGAIFTRAESLLYTIADAAVVGADSVVTTDSSAVQKSGGWFGFISDAMELVLKILKD 129

Query: 43  GLQALHVPYSYGFA 2
           GL A+HVPY+YGFA
Sbjct: 130 GLSAVHVPYAYGFA 143


>sp|Q8S339|ALB31_CHLRE Inner membrane ALBINO3-like protein 1,
           chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.1
           PE=3 SV=1
          Length = 495

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 16/32 (50%), Positives = 24/32 (75%)
 Frame = -1

Query: 97  WLSGLTDRLEGILKVLKDGLQALHVPYSYGFA 2
           W++ + D LE +L  L++GL  LHVPYSYG++
Sbjct: 113 WVAPVADALEQVLYALQEGLDKLHVPYSYGYS 144


>sp|Q8LKI3|ALB32_CHLRE Inner membrane ALBINO3-like protein 2,
           chloroplastic OS=Chlamydomonas reinhardtii GN=ALB3.2
           PE=2 SV=1
          Length = 422

 Score = 32.0 bits (71), Expect = 0.97
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -1

Query: 85  LTDRLEGILKVLKDGLQALHVPYSYGFA 2
           L    E +L+ L +GL++  +PYSYGFA
Sbjct: 77  LAQFFEFVLQTLDEGLESAKIPYSYGFA 104


>sp|Q63ZR6|UD3A1_XENLA UDP-glucuronosyltransferase 3A1 OS=Xenopus
           laevis GN=ugt3a1 PE=2 SV=1
          Length = 523

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -1

Query: 295 FHGVGMLAVRASFAEFDSHIEATSEFISTGLPQLVEKAEGLLYTI 161
           +HGV M+A+   F +FD+ +   ++ + T +P+   KAE L   I
Sbjct: 380 YHGVPMVAIPLFFDQFDNAVRIKAKHLGTFIPKDQLKAEKLANAI 424


>sp|P36165|TGL4_YEAST Lipase 4 OS=Saccharomyces cerevisiae GN=TGL4
           PE=1 SV=1
          Length = 910

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 160 QWCKGGPQLFQQAGADLWK*ILRLPLCDYQILQ 258
           +WC  G +L    G   WK  L  PL DY++++
Sbjct: 160 EWCSAGARLDDLTGKTEWKQKLESPLYDYKLIK 192


>sp|P54937|GUNA_CLOLO Endoglucanase A OS=Clostridium longisporum
           GN=celA PE=1 SV=1
          Length = 517

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 177 PSAFSTSWGRPVEMNSEVASM*LSNSAKLARTASIPTPWKQH 302
           P +F T WG PV   + +    + N+    +T  IPT W +H
Sbjct: 69  PISFETGWGNPVTTKAMIDK--IKNAG--FKTIRIPTTWGEH 106
tr_hit_id B8LKE4
Definition tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 68
Score (bit) 66.6
E-value 6.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913949|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_B11.
         (349 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea...    67   6e-10
tr|B8LKB2|B8LKB2_PICSI Putative uncharacterized protein OS=Picea...    67   6e-10
tr|Q0WVR0|Q0WVR0_ARATH Putative uncharacterized protein At1g2450...    59   9e-08
tr|Q75LC5|Q75LC5_ORYSJ Putative inner membrane protein (With alt...    59   2e-07
tr|Q75LC4|Q75LC4_ORYSJ Putative inner membrane protein (With alt...    59   2e-07
tr|Q10AQ5|Q10AQ5_ORYSJ ARTEMIS protein, chloroplast, putative, e...    59   2e-07
tr|Q0DLV1|Q0DLV1_ORYSJ Os03g0844700 protein OS=Oryza sativa subs...    59   2e-07
tr|A2XNZ3|A2XNZ3_ORYSI Putative uncharacterized protein OS=Oryza...    59   2e-07
tr|B6TRE2|B6TRE2_MAIZE Inner membrane protein ALBINO3 OS=Zea may...    56   1e-06
tr|A7P455|A7P455_VITVI Chromosome chr1 scaffold_5, whole genome ...    55   2e-06
tr|A7XUJ9|A7XUJ9_PONTR Chloroplast PPF-1 OS=Poncirus trifoliata ...    54   4e-06
tr|B4FSN2|B4FSN2_MAIZE Putative uncharacterized protein OS=Zea m...    52   2e-05
tr|B6UBJ7|B6UBJ7_MAIZE Inner membrane protein ALBINO3 OS=Zea may...    51   2e-05
tr|B3H4X4|B3H4X4_ARATH Uncharacterized protein At2g28800.3 OS=Ar...    51   2e-05
tr|A7NZ37|A7NZ37_VITVI Chromosome chr6 scaffold_3, whole genome ...    51   2e-05
tr|Q5ZEK1|Q5ZEK1_ORYSJ Putative PPF-1 protein (Os01g0151200 prot...    51   3e-05
tr|B8ADB5|B8ADB5_ORYSI Putative uncharacterized protein OS=Oryza...    51   3e-05
tr|A2ZPB5|A2ZPB5_ORYSJ Putative uncharacterized protein OS=Oryza...    51   3e-05
tr|A9TBG1|A9TBG1_PHYPA Predicted protein (Fragment) OS=Physcomit...    45   0.002
tr|Q5G2X9|Q5G2X9_GONPE Albino3-like protein OS=Gonium pectorale ...    43   0.007
tr|A8HYK7|A8HYK7_CHLRE Inner membrane ALBINO3-like protein 1 OS=...    42   0.020
tr|A9TZ57|A9TZ57_PHYPA Predicted protein (Fragment) OS=Physcomit...    39   0.13 
tr|A5AUT8|A5AUT8_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A0C1A9|A0C1A9_PARTE Chromosome undetermined scaffold_141, who...    35   2.4  
tr|A6DYI9|A6DYI9_9RHOB Type I secretion membrane fusion protein,...    34   3.2  
tr|Q01CT0|Q01CT0_OSTTA Putative PPF-1 protein (ISS) OS=Ostreococ...    33   5.4  
tr|A0D5N3|A0D5N3_PARTE Chromosome undetermined scaffold_39, whol...    33   5.4  

>tr|B8LKE4|B8LKE4_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 471

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 34/68 (50%), Positives = 41/68 (60%)
 Frame = -1

Query: 205 LPQLVEKAEGLLYTIXXXXXXXXXXXXXXVQTTNRDWLSGLTDRLEGILKVLKDGLQALH 26
           +P+LV +AEGLLYT+               Q TN  W   + D LEG LKVLKDGL  +H
Sbjct: 65  IPRLVSRAEGLLYTLADAAVATSDSVAPA-QKTNGSWFGFIADGLEGFLKVLKDGLTTVH 123

Query: 25  VPYSYGFA 2
           VPY+YGFA
Sbjct: 124 VPYAYGFA 131


>tr|B8LKB2|B8LKB2_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 471

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 34/68 (50%), Positives = 41/68 (60%)
 Frame = -1

Query: 205 LPQLVEKAEGLLYTIXXXXXXXXXXXXXXVQTTNRDWLSGLTDRLEGILKVLKDGLQALH 26
           +P+LV +AEGLLYT+               Q TN  W   + D LEG LKVLKDGL  +H
Sbjct: 65  IPRLVSRAEGLLYTLADAAVATSDSVAPA-QKTNGSWFGFIADGLEGFLKVLKDGLTTVH 123

Query: 25  VPYSYGFA 2
           VPY+YGFA
Sbjct: 124 VPYAYGFA 131


>tr|Q0WVR0|Q0WVR0_ARATH Putative uncharacterized protein At1g24500
           OS=Arabidopsis thaliana GN=At1g24500 PE=2 SV=1
          Length = 302

 Score = 59.3 bits (142), Expect = 9e-08
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 5/68 (7%)
 Frame = -1

Query: 190 EKAEGLLYTIXXXXXXXXXXXXXXVQTTNR-----DWLSGLTDRLEGILKVLKDGLQALH 26
           + AE LLYTI                TT +     DW SG+ + +E ILKVLKDGL  +H
Sbjct: 60  DHAENLLYTIADAAVSSSETFESVAGTTTKTTQSNDWFSGIANYMETILKVLKDGLSTVH 119

Query: 25  VPYSYGFA 2
           VPYSYGFA
Sbjct: 120 VPYSYGFA 127


>tr|Q75LC5|Q75LC5_ORYSJ Putative inner membrane protein (With
           alternative splicing) (ARTEMIS protein, chloroplast,
           putative, expressed) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0032G11.18 PE=3 SV=1
          Length = 489

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -1

Query: 100 DWLSGLTDRLEGILKVLKDGLQALHVPYSYGFA 2
           DWLSG+T+ +E +LKVLKDGL ALHVPY YGFA
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFA 130


>tr|Q75LC4|Q75LC4_ORYSJ Putative inner membrane protein (With
           alternative splicing) OS=Oryza sativa subsp. japonica
           GN=OSJNBa0032G11.18 PE=3 SV=1
          Length = 185

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -1

Query: 100 DWLSGLTDRLEGILKVLKDGLQALHVPYSYGFA 2
           DWLSG+T+ +E +LKVLKDGL ALHVPY YGFA
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFA 130


>tr|Q10AQ5|Q10AQ5_ORYSJ ARTEMIS protein, chloroplast, putative,
           expressed OS=Oryza sativa subsp. japonica
           GN=LOC_Os03g62750 PE=3 SV=1
          Length = 510

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -1

Query: 100 DWLSGLTDRLEGILKVLKDGLQALHVPYSYGFA 2
           DWLSG+T+ +E +LKVLKDGL ALHVPY YGFA
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFA 130


>tr|Q0DLV1|Q0DLV1_ORYSJ Os03g0844700 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0844700 PE=3 SV=1
          Length = 523

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -1

Query: 100 DWLSGLTDRLEGILKVLKDGLQALHVPYSYGFA 2
           DWLSG+T+ +E +LKVLKDGL ALHVPY YGFA
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFA 130


>tr|A2XNZ3|A2XNZ3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14293 PE=3 SV=1
          Length = 533

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 25/33 (75%), Positives = 29/33 (87%)
 Frame = -1

Query: 100 DWLSGLTDRLEGILKVLKDGLQALHVPYSYGFA 2
           DWLSG+T+ +E +LKVLKDGL ALHVPY YGFA
Sbjct: 98  DWLSGITNSMETVLKVLKDGLSALHVPYPYGFA 130


>tr|B6TRE2|B6TRE2_MAIZE Inner membrane protein ALBINO3 OS=Zea mays
           PE=2 SV=1
          Length = 449

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
 Frame = -1

Query: 214 STGLPQL---VEKAEGLLYTIXXXXXXXXXXXXXXVQTT----NRDWLSGLTDRLEGILK 56
           S G P L   +E+AE  LYT+               Q      N  W   +++ LE +LK
Sbjct: 56  SVGGPHLQAALERAEAALYTLADAAVAAAGAGADAGQAAAVQKNSGWFGFISEALEVVLK 115

Query: 55  VLKDGLQALHVPYSYGFA 2
           VLKDGL A+HVPYSYGFA
Sbjct: 116 VLKDGLSAVHVPYSYGFA 133


>tr|A7P455|A7P455_VITVI Chromosome chr1 scaffold_5, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00030703001
           PE=3 SV=1
          Length = 393

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 23/33 (69%), Positives = 28/33 (84%)
 Frame = -1

Query: 100 DWLSGLTDRLEGILKVLKDGLQALHVPYSYGFA 2
           DWLSG+T+ +E +LKVLK GL  LHVPY+YGFA
Sbjct: 90  DWLSGITNYMETVLKVLKGGLSTLHVPYAYGFA 122