BP913952 |
Clone id |
YMU001_000038_C02 |
Library |
YMU01 |
Length |
491 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000038_C02. |
Accession |
BP913952 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACCGTCATGTCCACCTGATCGAGCCAATCGTTCACCCGTTTTAGCTGTGATAGCATAGC GGCAATTTGAGACTTATCTTGCTGTATGGCTTTTGGAGCAGAAGCATCCGCATTGCCTTC GCCAGAGTTTGAAATCTGAAATCCATTATCTAACGCACTTTCCAGAAATTTCAAGAACCA GCTTTGAGATTCCTTTTGAAGTTTGGAAGCAAGTTCTGCAGTTTCCTGCAGCCCATCACC CTTCCTCCAGCCTACTCCAAGAGGTGTAGGCGAACACTGAGCACTTAAATCAGAATCAGT TCCAGATTTGGACCCAGTTGCCACCTTATTGGCCACTCCATTAGGTGAACGCTTGAAGGG AGATTGCCCCATCTTCAATGAGTTCGTTTGCTTTAATTCAGATACTTCCCATGCATTAAT GTTCTTTTTCTCGTTCCCACTACAGGGGCTCAATGGCTGCAGCCCATTGCTAAGAACCAG CATTGCTTTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q91957 |
Definition |
sp|Q91957|XIRP1_CHICK Xin actin-binding repeat-containing protein 1 OS=Gallus gallus |
Align length |
121 |
Score (bit) |
35.0 |
E-value |
0.18 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9U357 |
Definition |
tr|A9U357|A9U357_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
91 |
Score (bit) |
94.7 |
E-value |
2.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913952|Adiantum capillus-veneris mRNA, clone: YMU001_000038_C02. (491 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9U357|A9U357_PHYPA Predicted protein OS=Physcomitrella paten... 95 2e-18 tr|A9RFY4|A9RFY4_PHYPA Predicted protein OS=Physcomitrella paten... 79 9e-14 tr|A7PEV0|A7PEV0_VITVI Chromosome chr11 scaffold_13, whole genom... 75 2e-12 tr|A7P6E4|A7P6E4_VITVI Chromosome chr9 scaffold_7, whole genome ... 74 4e-12 tr|A9T0P6|A9T0P6_PHYPA Predicted protein OS=Physcomitrella paten... 74 5e-12 tr|A7QR78|A7QR78_VITVI Chromosome chr13 scaffold_149, whole geno... 73 6e-12 tr|Q9FRR2|Q9FRR2_ARATH F22O13.25 (At1g08760) (Putative uncharact... 70 4e-11 tr|A5AIH8|A5AIH8_VITVI Putative uncharacterized protein (Chromos... 68 3e-10 tr|Q9T0K8|Q9T0K8_ARATH Putative uncharacterized protein AT4g1337... 67 4e-10 tr|Q2RB96|Q2RB96_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 67 6e-10 tr|A3C819|A3C819_ORYSJ Putative uncharacterized protein OS=Oryza... 67 6e-10 tr|Q9LJH1|Q9LJH1_ARATH Gb|AAC14053.1 OS=Arabidopsis thaliana PE=... 66 8e-10 tr|Q8H7K9|Q8H7K9_ORYSJ Os03g0181800 protein OS=Oryza sativa subs... 66 8e-10 tr|Q6NKR8|Q6NKR8_ARATH At3g14170 OS=Arabidopsis thaliana PE=2 SV=1 66 8e-10 tr|A2XD85|A2XD85_ORYSI Putative uncharacterized protein OS=Oryza... 66 8e-10 tr|B8BDJ4|B8BDJ4_ORYSI Putative uncharacterized protein OS=Oryza... 65 1e-09 tr|A3C0N2|A3C0N2_ORYSJ Putative uncharacterized protein OS=Oryza... 65 1e-09 tr|Q2QYH0|Q2QYH0_ORYSJ Os12g0120000 protein OS=Oryza sativa subs... 65 2e-09 tr|B8BNZ5|B8BNZ5_ORYSI Putative uncharacterized protein OS=Oryza... 65 2e-09 tr|B8A0A5|B8A0A5_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08 tr|B6ST58|B6ST58_MAIZE Putative uncharacterized protein OS=Zea m... 61 2e-08 tr|Q6ZIT8|Q6ZIT8_ORYSJ Os08g0541500 protein OS=Oryza sativa subs... 60 4e-08 tr|B8B970|B8B970_ORYSI Putative uncharacterized protein OS=Oryza... 60 4e-08 tr|A3BVC4|A3BVC4_ORYSJ Putative uncharacterized protein OS=Oryza... 60 4e-08 tr|A2Q3C0|A2Q3C0_MEDTR Legume lectin, beta domain OS=Medicago tr... 49 2e-04 tr|Q6ZIP2|Q6ZIP2_ORYSJ Os07g0588300 protein OS=Oryza sativa subs... 47 5e-04 tr|A2YN69|A2YN69_ORYSI Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|A5C639|A5C639_VITVI Putative uncharacterized protein OS=Vitis... 43 0.007 tr|Q9SKA8|Q9SKA8_ARATH Putative uncharacterized protein At2g3192... 42 0.020 tr|Q9ZUB7|Q9ZUB7_ARATH F5O8.34 (At1g23790) OS=Arabidopsis thalia... 41 0.026
>tr|A9U357|A9U357_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_101176 PE=4 SV=1 Length = 860
Score = 94.7 bits (234), Expect = 2e-18 Identities = 51/91 (56%), Positives = 60/91 (65%), Gaps = 4/91 (4%) Frame = -3
Query: 273 SPTPLG--VGWRKGDGLQETAELASKLQKESQSWFLKFLESALDNGFQISNSGEGNAD-- 106 +PTP W +G G+ ET+ELA K+Q ESQ WFL F+E ALD GF I+ SG G + Sbjct: 720 APTPATPPAAWVRGKGVAETSELAKKVQNESQRWFLNFMEGALDVGFHIATSGIGEREDI 779
Query: 105 ASAPKAIQQDKSQIAAMLSQLKRVNDWLDQV 13 A QQ+ S IA MLSQLKRVNDWLDQV Sbjct: 780 YGAKVMSQQENSHIATMLSQLKRVNDWLDQV 810
>tr|A9RFY4|A9RFY4_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65610 PE=4 SV=1 Length = 829
Score = 79.3 bits (194), Expect = 9e-14 Identities = 54/121 (44%), Positives = 69/121 (57%), Gaps = 4/121 (3%) Frame = -3
Query: 363 SPFKRSPNGVANKVATGSKSGTDSDLSAQCSPTPLGVGWRKGDGLQETAELASKLQKESQ 184 SP KRS V + +KS S ++ PL + LQ+ EL ++Q E+Q Sbjct: 668 SPAKRSSIHVPLRNGLLAKSSKGSSIANM----PL----ERASRLQQMVELGKQVQLEAQ 719
Query: 183 SWFLKFLESALDNGFQIS----NSGEGNADASAPKAIQQDKSQIAAMLSQLKRVNDWLDQ 16 WFL F+ESALD+GF+IS +GEGN S + D SQIA+MLSQLK VNDWLD Sbjct: 720 RWFLIFMESALDSGFRISMNNGKAGEGNGVVS-----RADNSQIASMLSQLKHVNDWLDG 774
Query: 15 V 13 V Sbjct: 775 V 775
>tr|A7PEV0|A7PEV0_VITVI Chromosome chr11 scaffold_13, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00016797001 PE=4 SV=1 Length = 668
Score = 75.1 bits (183), Expect = 2e-12 Identities = 41/87 (47%), Positives = 53/87 (60%) Frame = -3
Query: 273 SPTPLGVGWRKGDGLQETAELASKLQKESQSWFLKFLESALDNGFQISNSGEGNADASAP 94 S P W +G+G++ET ELA LQ E Q WF+KF+E +LD GF++ D P Sbjct: 548 SEDPTIGSWTRGNGMKETIELAMNLQSEMQMWFVKFVEESLDAGFRVFR------DMLPP 601
Query: 93 KAIQQDKSQIAAMLSQLKRVNDWLDQV 13 + IAA+LSQLKRVNDWLD+V Sbjct: 602 EC-----GPIAAILSQLKRVNDWLDRV 623
>tr|A7P6E4|A7P6E4_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034034001 PE=4 SV=1 Length = 503
Score = 73.9 bits (180), Expect = 4e-12 Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 3/119 (2%) Frame = -3
Query: 360 PFKRSPNGVANKVATGSKSGTDSDLSAQCSPTPLG---VGWRKGDGLQETAELASKLQKE 190 P SP + TG G + SA+ S G + W KGDG +E EL L E Sbjct: 345 PNNSSPQADKSSKKTGLIHGKSALKSAKPSIELSGTEKLEWAKGDGAKEIKELKEILLNE 404
Query: 189 SQSWFLKFLESALDNGFQISNSGEGNADASAPKAIQQDKSQIAAMLSQLKRVNDWLDQV 13 +QSWFLKFLE ALD GF+IS + + + + + + IA LSQLK N+WLD++ Sbjct: 405 TQSWFLKFLEGALDAGFRISTMEKKSKEIVGRR--MEPDNHIAVTLSQLKHANEWLDKL 461
>tr|A9T0P6|A9T0P6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234615 PE=4 SV=1 Length = 995
Score = 73.6 bits (179), Expect = 5e-12 Identities = 48/121 (39%), Positives = 66/121 (54%), Gaps = 3/121 (2%) Frame = -3
Query: 366 QSPFKRSPNGVANKVATGSKSGTDSDLSAQCSPTPLGVGWRKGDGLQETAELASKLQKES 187 QSP K +P K ++ + + + SP P + LQ+ EL ++Q E+ Sbjct: 828 QSPAKLTPAASPAKRSSKVAPLRNLPKATKESPAPTA-SLERASRLQQMVELGKQVQIEA 886
Query: 186 QSWFLKFLESALDNGFQIS---NSGEGNADASAPKAIQQDKSQIAAMLSQLKRVNDWLDQ 16 Q WFL+F+E ALD+GF+IS GE N S Q + QIA++LSQLK VNDWLD Sbjct: 887 QRWFLQFMEGALDSGFRISTLGGKGEENGFVS-----QAENCQIASVLSQLKHVNDWLDG 941
Query: 15 V 13 V Sbjct: 942 V 942
>tr|A7QR78|A7QR78_VITVI Chromosome chr13 scaffold_149, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00003711001 PE=4 SV=1 Length = 567
Score = 73.2 bits (178), Expect = 6e-12 Identities = 48/127 (37%), Positives = 64/127 (50%) Frame = -3
Query: 399 ELKQTNSLKMGQSPFKRSPNGVANKVATGSKSGTDSDLSAQCSPTPLGVGWRKGDGLQET 220 E+K N + P R+ G+++ A G S + SA + W KG GL+ET Sbjct: 420 EMKSENHSPQNK-PSPRNNGGLSDSSAKGLPSPSWRRFSASKRMSAKREEWSKGSGLRET 478
Query: 219 AELASKLQKESQSWFLKFLESALDNGFQISNSGEGNADASAPKAIQQDKSQIAAMLSQLK 40 A LA KL S+ WFLK+LE +L+ GF + EG A +IA +L QLK Sbjct: 479 ANLAKKLLSVSRGWFLKYLEDSLNKGFGLKRE-EGGA-------------EIACLLGQLK 524
Query: 39 RVNDWLD 19 RVN WLD Sbjct: 525 RVNQWLD 531
>tr|Q9FRR2|Q9FRR2_ARATH F22O13.25 (At1g08760) (Putative uncharacterized protein At1g08760) OS=Arabidopsis thaliana GN=At1g08760 PE=2 SV=1 Length = 748
Score = 70.5 bits (171), Expect = 4e-11 Identities = 48/133 (36%), Positives = 62/133 (46%), Gaps = 14/133 (10%) Frame = -3
Query: 369 GQSPFKRSPNGVANKVATGSK-------------SGTDSDLSAQCSPTPLGVGWRKGDGL 229 G + ++ + NK GSK S + S S +P + W KG+GL Sbjct: 569 GNNSSSKTRGNIQNKPTIGSKLVAQGMIRKHRENSSSQKATSVAGSESP-PLNWVKGNGL 627
Query: 228 QETAELASKLQKESQSWFLKFLESALDNGFQISNSGEGNADASAPKAIQ-QDKSQIAAML 52 E +LA KLQ SQ WFL F+E LD AD ++ D QIA ML Sbjct: 628 NEATDLAEKLQMVSQDWFLGFVERFLD------------ADVITSSSLSLSDNGQIAGML 675
Query: 51 SQLKRVNDWLDQV 13 SQLK VNDWLD++ Sbjct: 676 SQLKSVNDWLDEI 688
>tr|A5AIH8|A5AIH8_VITVI Putative uncharacterized protein (Chromosome chr5 scaffold_253, whole genome shotgun sequence) OS=Vitis vinifera GN=GSVIVT00010302001 PE=4 SV=1 Length = 739
Score = 67.8 bits (164), Expect = 3e-10 Identities = 49/143 (34%), Positives = 61/143 (42%), Gaps = 17/143 (11%) Frame = -3
Query: 390 QTNSLKMGQSPFKRSPNGVAN---KVATGSKSGTDSDLSAQCSPTPLGVG---------- 250 Q G P N V N K T ++ S L+A +P G G Sbjct: 552 QNQKTLAGNQPMLVLENSVKNASTKTQTKARQTVGSKLAAPGTPRRPGDGPTASQKPRPP 611
Query: 249 ----WRKGDGLQETAELASKLQKESQSWFLKFLESALDNGFQISNSGEGNADASAPKAIQ 82 W +G+GL E +LA L+ ESQ WFL F+E LD IS Sbjct: 612 PPTEWIRGNGLDEAIDLAEMLRMESQDWFLGFVERFLDADVDIS--------------AL 657
Query: 81 QDKSQIAAMLSQLKRVNDWLDQV 13 D QIA ML+QLK VNDWLD++ Sbjct: 658 SDNGQIAGMLTQLKSVNDWLDEI 680
>tr|Q9T0K8|Q9T0K8_ARATH Putative uncharacterized protein AT4g13370 (At4g13370) (Putative uncharacterized protein At4g13370/T9E8_110) OS=Arabidopsis thaliana GN=AT4g13370 PE=2 SV=1 Length = 673
Score = 67.0 bits (162), Expect = 4e-10 Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 6/106 (5%) Frame = -3
Query: 312 SKSGTDSDLSAQCSPTPLG-----VG-WRKGDGLQETAELASKLQKESQSWFLKFLESAL 151 S S + + SP P VG W DGL+ETA+ A LQ E Q WF++F+E +L Sbjct: 543 SPSSLKKSMPTRLSPRPSSKTDNIVGMWTDLDGLKETAKFAVNLQSEMQVWFIEFVEESL 602
Query: 150 DNGFQISNSGEGNADASAPKAIQQDKSQIAAMLSQLKRVNDWLDQV 13 DN N+ + + D S+ IAA+LSQLK+VN+WLD+V Sbjct: 603 DN----KNAAKRSLDGSS----------IAAVLSQLKQVNEWLDRV 634
>tr|Q2RB96|Q2RB96_ORYSJ Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0120200 PE=4 SV=1 Length = 708
Score = 66.6 bits (161), Expect = 6e-10 Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 1/98 (1%) Frame = -3
Query: 303 GTDSDLSAQCSPTPLG-VGWRKGDGLQETAELASKLQKESQSWFLKFLESALDNGFQISN 127 GT + + ++ PT W K G+ ETAELA+ L +E +WFLKF++ A+D GF + Sbjct: 576 GTSAKVQSKVLPTSTASCAWNKTQGVNETAELATTLCREMHTWFLKFVDEAMDLGFHLF- 634
Query: 126 SGEGNADASAPKAIQQDKSQIAAMLSQLKRVNDWLDQV 13 E AS K S I +LSQ K+++DWLD V Sbjct: 635 --EDQNVASRGK----QSSHITMVLSQFKKISDWLDGV 666
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