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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913955
Clone id YMU001_000038_C05
Library
Length 396
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_C05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTGTTTTGCAAGACAAAAACTTCAATAACAAACACATACAAGCCTCTAGCAGATACAGTG
CATGGACCATTTGGCCAAGCATTAAATTACAAATGCCTAGACAAAGACACAAGATATTTT
AGCACCACATCTAGCATGGACCAATTCACCATGCATGGAAAACAAGTGCATATACACTAT
GTGAACATGGTGAATGAAGTCCAAAGCCCGCCAATTTCAGTAGAGAAAAATTATCTTCTC
AAACCCTTTCTCCAACTAGATATCTTGCAGCCTGTAGTGCAAAATAGGTCAATATTATGT
TTGCACCGGCTCGCTTAATGCAGAGAAGAGACTCCAAAATGGCTTTCTTCTCATCCAGCA
TTCCTTGCGCGGCTGCAGCTCTTATCATTGAATACT
■■Homology search results ■■ -
sp_hit_id P45623
Definition sp|P45623|HEM2_SELMA Delta-aminolevulinic acid dehydratase, chloroplastic OS=Selaginella martensii
Align length 50
Score (bit) 84.7
E-value 1.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913955|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_C05.
         (396 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P45623|HEM2_SELMA Delta-aminolevulinic acid dehydratase, chlo...    85   1e-16
sp|Q43058|HEM2_PHYPA Delta-aminolevulinic acid dehydratase, chlo...    72   9e-13
sp|P30124|HEM2_PEA Delta-aminolevulinic acid dehydratase, chloro...    71   1e-12
sp|P24493|HEM2_SPIOL Delta-aminolevulinic acid dehydratase, chlo...    70   3e-12
sp|P43210|HEM2_SOYBN Delta-aminolevulinic acid dehydratase, chlo...    68   2e-11
sp|Q9SFH9|HEM2_ARATH Delta-aminolevulinic acid dehydratase, chlo...    67   4e-11
sp|Q8KCJ0|HEM2_CHLTE Delta-aminolevulinic acid dehydratase OS=Ch...    62   9e-10
sp|Q42682|HEM2_CHLRE Delta-aminolevulinic acid dehydratase, chlo...    62   1e-09
sp|Q59334|HEM2_CHLP8 Delta-aminolevulinic acid dehydratase OS=Ch...    62   1e-09
sp|Q9K8G2|HEM2_BACHD Delta-aminolevulinic acid dehydratase OS=Ba...    62   1e-09
sp|Q42836|HEM2_HORVU Delta-aminolevulinic acid dehydratase, chlo...    60   3e-09
sp|O33357|HEM2_MYCTU Delta-aminolevulinic acid dehydratase OS=My...    58   2e-08
sp|O67876|HEM2_AQUAE Delta-aminolevulinic acid dehydratase OS=Aq...    57   2e-08
sp|P43087|HEM2_SYNE7 Delta-aminolevulinic acid dehydratase OS=Sy...    57   4e-08
sp|P77969|HEM2_SYNY3 Delta-aminolevulinic acid dehydratase OS=Sy...    56   5e-08
sp|Q8CNZ0|HEM2_STAES Delta-aminolevulinic acid dehydratase OS=St...    56   6e-08
sp|Q5HNN5|HEM2_STAEQ Delta-aminolevulinic acid dehydratase OS=St...    56   6e-08
sp|P54919|HEM2_STRCO Delta-aminolevulinic acid dehydratase OS=St...    54   2e-07
sp|P64335|HEM2_STAAW Delta-aminolevulinic acid dehydratase OS=St...    54   2e-07
sp|Q6G8Q7|HEM2_STAAS Delta-aminolevulinic acid dehydratase OS=St...    54   2e-07
sp|Q6GG37|HEM2_STAAR Delta-aminolevulinic acid dehydratase OS=St...    54   2e-07
sp|P64334|HEM2_STAAN Delta-aminolevulinic acid dehydratase OS=St...    54   2e-07
sp|P64333|HEM2_STAAM Delta-aminolevulinic acid dehydratase OS=St...    54   2e-07
sp|Q5HFA4|HEM2_STAAC Delta-aminolevulinic acid dehydratase OS=St...    54   2e-07
sp|Q2FXR3|HEM2_STAA8 Delta-aminolevulinic acid dehydratase OS=St...    54   2e-07
sp|P30950|HEM2_BACSU Delta-aminolevulinic acid dehydratase OS=Ba...    52   9e-07
sp|P0ACB3|HEM2_SHIFL Delta-aminolevulinic acid dehydratase OS=Sh...    52   1e-06
sp|P0ACB2|HEM2_ECOLI Delta-aminolevulinic acid dehydratase OS=Es...    52   1e-06
sp|P46723|HEM2_MYCLE Delta-aminolevulinic acid dehydratase OS=My...    51   2e-06
sp|P45622|HEM2_BRAJA Delta-aminolevulinic acid dehydratase OS=Br...    51   2e-06

>sp|P45623|HEM2_SELMA Delta-aminolevulinic acid dehydratase,
           chloroplastic OS=Selaginella martensii GN=ALA2 PE=3 SV=1
          Length = 417

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 42/50 (84%), Positives = 48/50 (96%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+AAA+QGMLDEKKAILESLLCIKRAGA++ILTY ALQAAR+L GE+
Sbjct: 368 YSMIKAAASQGMLDEKKAILESLLCIKRAGADVILTYAALQAARWLCGEK 417


>sp|Q43058|HEM2_PHYPA Delta-aminolevulinic acid dehydratase,
           chloroplastic OS=Physcomitrella patens GN=ALAD PE=2 SV=1
          Length = 430

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 37/51 (72%), Positives = 45/51 (88%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGERV 242
           YSMIRA   +GMLDEKKA+LESLL I+RAGA++ILTYFA+QAA++L  ERV
Sbjct: 381 YSMIRAGC-RGMLDEKKAVLESLLSIRRAGADVILTYFAIQAAQWLCAERV 430


>sp|P30124|HEM2_PEA Delta-aminolevulinic acid dehydratase,
           chloroplastic (Fragment) OS=Pisum sativum GN=ALAD PE=2
           SV=1
          Length = 398

 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 34/50 (68%), Positives = 43/50 (86%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+A  A  M+DE+K ++ESLLC++RAGA+IILTYFALQAAR L GE+
Sbjct: 348 YSMIKAGGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARTLCGEK 397


>sp|P24493|HEM2_SPIOL Delta-aminolevulinic acid dehydratase,
           chloroplastic OS=Spinacia oleracea GN=ALA1 PE=1 SV=2
          Length = 433

 Score = 70.5 bits (171), Expect = 3e-12
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+A     M+DE+K +LESLLC++RAGA+IILTYFALQAAR L GE+
Sbjct: 383 YSMIKAGGVLKMIDEEKVMLESLLCLRRAGADIILTYFALQAARCLCGEK 432


>sp|P43210|HEM2_SOYBN Delta-aminolevulinic acid dehydratase,
           chloroplastic OS=Glycine max GN=ALAD PE=2 SV=1
          Length = 412

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 32/50 (64%), Positives = 43/50 (86%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           Y+MI+AA A  M+DE+K ++ESL+C++RAGA+IILTY ALQAAR L GE+
Sbjct: 362 YAMIKAAGALKMIDEEKVMMESLMCLRRAGADIILTYSALQAARCLCGEK 411


>sp|Q9SFH9|HEM2_ARATH Delta-aminolevulinic acid dehydratase,
           chloroplastic OS=Arabidopsis thaliana GN=At1g69740 PE=1
           SV=1
          Length = 430

 Score = 66.6 bits (161), Expect = 4e-11
 Identities = 31/50 (62%), Positives = 41/50 (82%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+A     M+DE+K ++ESL+C++RAGA+IILTYFALQAA  L GE+
Sbjct: 380 YSMIKAGGVLKMIDEEKVMMESLMCLRRAGADIILTYFALQAATCLCGEK 429


>sp|Q8KCJ0|HEM2_CHLTE Delta-aminolevulinic acid dehydratase
           OS=Chlorobium tepidum GN=hemB PE=3 SV=1
          Length = 328

 Score = 62.0 bits (149), Expect = 9e-10
 Identities = 27/46 (58%), Positives = 40/46 (86%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYL 257
           Y+M++AAAA G +DE++ ++ESLLC+KRAGA+II TY+A +AA+ L
Sbjct: 282 YAMVKAAAANGWIDEERVMMESLLCMKRAGADIIFTYYAKEAAKKL 327


>sp|Q42682|HEM2_CHLRE Delta-aminolevulinic acid dehydratase,
           chloroplastic OS=Chlamydomonas reinhardtii GN=ALAD PE=2
           SV=1
          Length = 390

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 24/50 (48%), Positives = 42/50 (84%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           Y+M++AAA +G L+EK A+LE++ C +RAG ++ILTY+ ++A+++L GE+
Sbjct: 341 YAMLKAAAERGWLNEKDAVLEAMTCFRRAGGDLILTYYGIEASKWLAGEK 390


>sp|Q59334|HEM2_CHLP8 Delta-aminolevulinic acid dehydratase
           OS=Chlorobaculum parvum (strain NCIB 8327) GN=hemB PE=1
           SV=1
          Length = 328

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 27/46 (58%), Positives = 40/46 (86%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYL 257
           Y+M++AAAA+G +DE + ++ESLLC+KRAGA+II TY+A +AA+ L
Sbjct: 282 YAMVKAAAAKGWIDEDRVMMESLLCMKRAGADIIFTYYAKEAAKKL 327


>sp|Q9K8G2|HEM2_BACHD Delta-aminolevulinic acid dehydratase
           OS=Bacillus halodurans GN=hemB PE=3 SV=1
          Length = 328

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 29/50 (58%), Positives = 39/50 (78%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+AA+ QG +DEK  +LE L+ +KRAGA++ILTYFA   AR+L  E+
Sbjct: 279 YSMIKAASLQGWIDEKSTVLEKLISMKRAGADLILTYFAKDVARWLNEEK 328
tr_hit_id A9TFG3
Definition tr|A9TFG3|A9TFG3_PHYPA Delta-aminolevulinic acid dehydratase OS=Physcomitrella patens subsp. patens
Align length 51
Score (bit) 80.5
E-value 4.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913955|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_C05.
         (396 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TFG3|A9TFG3_PHYPA Delta-aminolevulinic acid dehydratase OS=...    80   4e-14
tr|Q43148|Q43148_SELMA Delta-aminolevulinic acid dehydratase (Fr...    80   5e-14
tr|B8LR35|B8LR35_PICSI Putative uncharacterized protein OS=Picea...    80   7e-14
tr|A9U2X5|A9U2X5_PHYPA Delta-aminolevulinic acid dehydratase OS=...    77   6e-13
tr|B7FJZ6|B7FJZ6_MEDTR Putative uncharacterized protein OS=Medic...    71   2e-11
tr|A5B0X9|A5B0X9_VITVI Delta-aminolevulinic acid dehydratase OS=...    70   4e-11
tr|Q94LA4|Q94LA4_ARATH Delta-aminolevulinic acid dehydratase (Al...    68   3e-10
tr|Q46CH2|Q46CH2_METBF Delta-aminolevulinic acid dehydratase OS=...    68   3e-10
tr|Q9ATH0|Q9ATH0_RAPSA Delta-aminolevulinic acid dehydratase OS=...    67   6e-10
tr|Q8TT59|Q8TT59_METAC Delta-aminolevulinic acid dehydratase OS=...    66   8e-10
tr|Q5Z8V9|Q5Z8V9_ORYSJ Delta-aminolevulinic acid dehydratase OS=...    66   1e-09
tr|A2YGS3|A2YGS3_ORYSI Delta-aminolevulinic acid dehydratase OS=...    66   1e-09
tr|Q8PW59|Q8PW59_METMA Delta-aminolevulinic acid dehydratase OS=...    65   1e-09
tr|B4SFH5|B4SFH5_PELPB Porphobilinogen synthase OS=Pelodictyon p...    64   4e-09
tr|B6TPK4|B6TPK4_MAIZE Delta-aminolevulinic acid dehydratase OS=...    64   4e-09
tr|Q9ARD8|Q9ARD8_GONPO Delta-aminolevulinic acid dehydratase (Fr...    64   5e-09
tr|A8MAI6|A8MAI6_CALMQ Delta-aminolevulinic acid dehydratase OS=...    64   5e-09
tr|A8I980|A8I980_CHLRE Delta-aminolevulinic acid dehydratase OS=...    63   6e-09
tr|B5RWT9|B5RWT9_RALSO Delta-aminolevulinic acid dehydratase pro...    63   8e-09
tr|A3YVU1|A3YVU1_9SYNE Delta-aminolevulinic acid dehydratase OS=...    63   8e-09
tr|Q8XV42|Q8XV42_RALSO Delta-aminolevulinic acid dehydratase OS=...    62   1e-08
tr|Q47IE8|Q47IE8_DECAR Delta-aminolevulinic acid dehydratase OS=...    62   1e-08
tr|A9GHX8|A9GHX8_SORC5 Delta-aminolevulinic acid dehydratase OS=...    62   1e-08
tr|A7HA76|A7HA76_ANADF Delta-aminolevulinic acid dehydratase OS=...    62   1e-08
tr|A7CI16|A7CI16_BURPI Delta-aminolevulinic acid dehydratase OS=...    62   1e-08
tr|A1HSI6|A1HSI6_9FIRM Delta-aminolevulinic acid dehydratase OS=...    62   1e-08
tr|A7NKV0|A7NKV0_ROSCS Delta-aminolevulinic acid dehydratase OS=...    62   1e-08
tr|A8A9A5|A8A9A5_IGNH4 Delta-aminolevulinic acid dehydratase OS=...    62   1e-08
tr|Q72I98|Q72I98_THET2 Delta-aminolevulinic acid dehydratase OS=...    62   2e-08
tr|Q5SHY2|Q5SHY2_THET8 Delta-aminolevulinic acid dehydratase OS=...    62   2e-08

>tr|A9TFG3|A9TFG3_PHYPA Delta-aminolevulinic acid dehydratase
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_221821 PE=3 SV=1
          Length = 432

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 40/51 (78%), Positives = 47/51 (92%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGERV 242
           YSMIRAAAA GMLDEKKA+LESLL I+RAGA++ILTYFA+QAA++L  ERV
Sbjct: 382 YSMIRAAAAAGMLDEKKAVLESLLSIRRAGADVILTYFAIQAAQWLCAERV 432


>tr|Q43148|Q43148_SELMA Delta-aminolevulinic acid dehydratase
           (Fragment) OS=Selaginella martensii GN=ala 2 PE=2 SV=1
          Length = 401

 Score = 80.1 bits (196), Expect = 5e-14
 Identities = 42/51 (82%), Positives = 48/51 (94%), Gaps = 1/51 (1%)
 Frame = -3

Query: 394 YSMIRAAAAQGML-DEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+AAA+QGML DEKKAILESLLCIKRAGA++ILTY ALQAAR+L GE+
Sbjct: 351 YSMIKAAASQGMLVDEKKAILESLLCIKRAGADVILTYAALQAARWLCGEK 401


>tr|B8LR35|B8LR35_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 430

 Score = 79.7 bits (195), Expect = 7e-14
 Identities = 39/49 (79%), Positives = 46/49 (93%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGE 248
           YSMI+AAAA+GMLDE KA++ESLLCIKRAGA+ ILTYFALQAAR+L G+
Sbjct: 380 YSMIKAAAAKGMLDETKAMMESLLCIKRAGADAILTYFALQAARHLCGD 428


>tr|A9U2X5|A9U2X5_PHYPA Delta-aminolevulinic acid dehydratase
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_173375 PE=3 SV=1
          Length = 428

 Score = 76.6 bits (187), Expect = 6e-13
 Identities = 37/51 (72%), Positives = 46/51 (90%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGERV 242
           YSMI+AAAA GMLDEKKA+LESLL I+RAGA++ILTYFA+ AA++L  ER+
Sbjct: 378 YSMIKAAAAAGMLDEKKAVLESLLSIRRAGADVILTYFAIPAAQWLCAERI 428


>tr|B7FJZ6|B7FJZ6_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 413

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 34/50 (68%), Positives = 43/50 (86%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+A  A  M+DE+K ++ESLLC++RAGA+IILTYFALQAAR L GE+
Sbjct: 363 YSMIKAGGALKMIDEEKVMMESLLCLRRAGADIILTYFALQAARCLCGEK 412


>tr|A5B0X9|A5B0X9_VITVI Delta-aminolevulinic acid dehydratase
           OS=Vitis vinifera GN=GSVIVT00015405001 PE=3 SV=1
          Length = 430

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 33/50 (66%), Positives = 43/50 (86%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+A A   M+DE+K ++ESL+C++RAGA+IILTYFALQAAR L GE+
Sbjct: 380 YSMIKAGAVLKMIDEEKVMMESLMCLRRAGADIILTYFALQAARCLCGEK 429


>tr|Q94LA4|Q94LA4_ARATH Delta-aminolevulinic acid dehydratase
           (Alad), putative OS=Arabidopsis thaliana GN=At1g44318
           PE=3 SV=1
          Length = 406

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 33/49 (67%), Positives = 41/49 (83%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGE 248
           YSMI+AA    M+DE+K ++ESLLCI+RAGA++ILTYFALQAA  L GE
Sbjct: 351 YSMIKAAGLLKMIDEEKVMMESLLCIRRAGADLILTYFALQAATKLCGE 399


>tr|Q46CH2|Q46CH2_METBF Delta-aminolevulinic acid dehydratase
           OS=Methanosarcina barkeri (strain Fusaro / DSM 804)
           GN=Mbar_A1463 PE=3 SV=1
          Length = 324

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 35/46 (76%), Positives = 39/46 (84%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYL 257
           YSMI+AAAA G LDEKKAI ESL+ IKRAGA+II+TYFA  AAR L
Sbjct: 278 YSMIKAAAANGWLDEKKAIYESLISIKRAGADIIITYFAKDAARML 323


>tr|Q9ATH0|Q9ATH0_RAPSA Delta-aminolevulinic acid dehydratase
           OS=Raphanus sativus GN=alad PE=2 SV=1
          Length = 426

 Score = 66.6 bits (161), Expect = 6e-10
 Identities = 30/50 (60%), Positives = 41/50 (82%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYLVGER 245
           YSMI+A     M+DE+K ++ESL+C++RAGA+IILTYFALQAA YL  ++
Sbjct: 376 YSMIKAGGVLKMIDEEKVMMESLMCLRRAGADIILTYFALQAATYLCNQK 425


>tr|Q8TT59|Q8TT59_METAC Delta-aminolevulinic acid dehydratase
           OS=Methanosarcina acetivorans GN=hemB PE=3 SV=1
          Length = 324

 Score = 66.2 bits (160), Expect = 8e-10
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = -3

Query: 394 YSMIRAAAAQGMLDEKKAILESLLCIKRAGANIILTYFALQAARYL 257
           YSMI+AAAA G LDEKKAI ESL+ IKRAGA+ I+TYFA  AAR L
Sbjct: 278 YSMIKAAAANGWLDEKKAIYESLISIKRAGADFIITYFAKDAARML 323