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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913958
Clone id YMU001_000038_C08
Library
Length 238
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TAGATGCTTTCAGCAGTTATCCGCTCCGCACTTGGCTACCCAGCGTTTGCCGCGGGCACG
ACAACTGGTACACCAGAGGTGCGTCCTTCCCGGTCCTCTCGTACTAGGGAAAGGTCCCCT
CAATGCTCTAGCGCCCGCACCGGATATGGACCGAACTGTCTCACGACGTTCTGAACCCAG
CTCACGTACCGCTTTACATGGGCGAACAGCCCAACCCTTGGGACGTACTACCGCCCCA
■■Homology search results ■■ -
sp_hit_id Q9PLI5
Definition sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia muridarum
Align length 29
Score (bit) 38.9
E-value 0.008
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913958|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_C08.
         (238 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydi...    39   0.008
sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal regio...    35   0.15 
sp|Q9PQ33|SYFB_UREPA Phenylalanyl-tRNA synthetase beta chain OS=...    32   1.3  
sp|Q29485|PLMN_ERIEU Plasminogen OS=Erinaceus europaeus GN=PLG P...    30   4.9  
sp|Q9ZGE6|BCHD_HELMO Magnesium-chelatase 67 kDa subunit OS=Helio...    29   6.4  
sp|P47988|TEA1_YEAST TY1 enhancer activator OS=Saccharomyces cer...    29   8.4  
sp|Q55012|PTLS_STRS3 Pentalenene synthase OS=Streptomyces sp. (s...    29   8.4  

>sp|Q9PLI5|Y114_CHLMU Uncharacterized protein TC_0114 OS=Chlamydia
           muridarum GN=TC_0114 PE=4 SV=2
          Length = 122

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = +2

Query: 131 APAPDMDRTVSRRSEPSSRTALHGRTAQP 217
           AP  D D+TVSRR EPSSRTAL G    P
Sbjct: 43  APTKDRDQTVSRRFEPSSRTALIGEQPNP 71



 Score = 30.0 bits (66), Expect = 3.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 177 PAHVPLYMGEQPNPWDVLPP 236
           P+     +GEQPNPWD+L P
Sbjct: 58  PSSRTALIGEQPNPWDLLQP 77


>sp|Q9CYF5|WBS16_MOUSE Williams-Beuren syndrome chromosomal region
           16 protein homolog OS=Mus musculus GN=Wbscr16 PE=2 SV=1
          Length = 461

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = -2

Query: 138 AGARALRGPFPSTRGPGRTHLWCTSCRARGKRWVAKCGAD 19
           A ARALRGP P    P R H W  + R+R +R  A+  AD
Sbjct: 3   AAARALRGPRPRWPTPAREH-WTPAGRSRSRREAAEAEAD 41


>sp|Q9PQ33|SYFB_UREPA Phenylalanyl-tRNA synthetase beta chain
           OS=Ureaplasma parvum GN=pheT PE=3 SV=1
          Length = 772

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 20/61 (32%), Positives = 27/61 (44%)
 Frame = -2

Query: 198 CKAVRELGSERRETVRSISGAGARALRGPFPSTRGPGRTHLWCTSCRARGKRWVAKCGAD 19
           C A+ +LG E  ET+ SI  +           TR P   HL     +A  K +   CGA+
Sbjct: 24  CAALMDLGCEV-ETINSIKPSTNLVFAKVLEKTRHPNANHLNLVKVKANQKVYEIVCGAN 82

Query: 18  N 16
           N
Sbjct: 83  N 83


>sp|Q29485|PLMN_ERIEU Plasminogen OS=Erinaceus europaeus GN=PLG PE=2
           SV=1
          Length = 810

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -3

Query: 218 RVGLFAHVKRYVSWVQNVVR 159
           R G++  V RYVSW+Q+V+R
Sbjct: 789 RPGVYVRVSRYVSWLQDVMR 808


>sp|Q9ZGE6|BCHD_HELMO Magnesium-chelatase 67 kDa subunit
           OS=Heliobacillus mobilis GN=bchD PE=3 SV=1
          Length = 666

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/45 (33%), Positives = 18/45 (40%), Gaps = 6/45 (13%)
 Frame = -2

Query: 168 RRETVRSISGAGARALRGPFPSTRG------PGRTHLWCTSCRAR 52
           RR T +++   G R L  P     G      P   H WC  CR R
Sbjct: 38  RRGTGKTVLARGLRHLLPPIDQLEGCPCHCNPAEPHSWCNRCRER 82


>sp|P47988|TEA1_YEAST TY1 enhancer activator OS=Saccharomyces
           cerevisiae GN=TEA1 PE=1 SV=2
          Length = 759

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
 Frame = -2

Query: 174 SERRETVRSISGAGARALRGPFPSTRGPG-RTHLWCTSCRARGKRWVAKCGADNC 13
           S   E  RS S A  R+  G    T G   R  L CT+CR R K+        NC
Sbjct: 35  SSNEENSRSSSAANVRSGTGANTLTNGGSTRKRLACTNCRNRRKKCDLGFPCGNC 89


>sp|Q55012|PTLS_STRS3 Pentalenene synthase OS=Streptomyces sp.
           (strain UC5319) PE=1 SV=4
          Length = 337

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
 Frame = -2

Query: 171 ERRETVRSISGAGARALRGPFPSTRGP---GRTHLWCTSCRARGKRWVAK 31
           E  E  + ++   A AL GP P T  P   G   +W  +C      W A+
Sbjct: 89  ENPEDTKQLTDQVAAALDGPLPDTAPPIAHGFADIWRRTCEGMTPAWCAR 138
tr_hit_id Q3BKH8
Definition tr|Q3BKH8|Q3BKH8_9PROT Putative uncharacterized protein OS=Magnetospirillum gryphiswaldense
Align length 59
Score (bit) 81.6
E-value 2.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913958|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_C08.
         (238 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3BKH8|Q3BKH8_9PROT Putative uncharacterized protein OS=Magne...    82   2e-14
tr|A6H5N5|A6H5N5_CYCTA Putative uncharacterized protein OS=Cycas...    76   9e-13
tr|A5AX71|A5AX71_VITVI Putative uncharacterized protein OS=Vitis...    76   9e-13
tr|B2DUY1|B2DUY1_STRPN Putative uncharacterized protein OS=Strep...    74   4e-12
tr|A4QMC4|A4QMC4_PINKO ORF107c OS=Pinus koraiensis PE=4 SV=1           74   5e-12
tr|Q3BAI1|Q3BAI1_PHAAO Putative uncharacterized protein rps12 OS...    73   8e-12
tr|A7PTZ2|A7PTZ2_VITVI Chromosome chr7 scaffold_31, whole genome...    70   4e-11
tr|A5ZYK7|A5ZYK7_9FIRM Putative uncharacterized protein OS=Rumin...    69   9e-11
tr|B2Q2E5|B2Q2E5_PROST Putative uncharacterized protein OS=Provi...    65   1e-09
tr|B1SBJ6|B1SBJ6_9STRE Putative uncharacterized protein OS=Strep...    65   2e-09
tr|B7RVW1|B7RVW1_9GAMM Putative uncharacterized protein OS=marin...    59   1e-07
tr|Q848X1|Q848X1_BACME Putative uncharacterized protein OS=Bacil...    57   5e-07
tr|A5Z3S2|A5Z3S2_9FIRM Putative uncharacterized protein OS=Eubac...    57   6e-07
tr|B2EIB5|B2EIB5_9BACT Putative uncharacterized protein OS=bacte...    49   1e-06
tr|Q4EE25|Q4EE25_LISMO Putative uncharacterized protein OS=Liste...    45   1e-06
tr|B6WYH0|B6WYH0_9DELT Putative uncharacterized protein OS=Desul...    48   1e-06
tr|B6GEJ1|B6GEJ1_9ACTN Putative uncharacterized protein OS=Colli...    55   2e-06
tr|Q85WT1|Q85WT1_PINKO ORF56f OS=Pinus koraiensis PE=4 SV=1            55   2e-06
tr|Q4HIX7|Q4HIX7_CAMLA Cell wall-associated hydrolase, putative ...    47   2e-06
tr|B2E6W4|B2E6W4_STRPN Putative uncharacterized protein OS=Strep...    44   2e-06
tr|B0PBI1|B0PBI1_9FIRM Putative uncharacterized protein OS=Anaer...    54   3e-06
tr|A5ZQM3|A5ZQM3_9FIRM Putative uncharacterized protein OS=Rumin...    43   3e-06
tr|A5Z309|A5Z309_9FIRM Putative uncharacterized protein OS=Eubac...    43   3e-06
tr|Q4EFZ9|Q4EFZ9_LISMO Putative uncharacterized protein OS=Liste...    54   4e-06
tr|Q8CQV6|Q8CQV6_STAES Putative uncharacterized protein OS=Staph...    43   4e-06
tr|Q848W1|Q848W1_BACME Putative uncharacterized protein OS=Bacil...    43   4e-06
tr|B5CLP4|B5CLP4_9FIRM Putative uncharacterized protein OS=Rumin...    54   5e-06
tr|B0TIE8|B0TIE8_HELMI Putative uncharacterized protein OS=Helio...    52   5e-06
tr|A6P142|A6P142_9BACE Putative uncharacterized protein OS=Bacte...    53   7e-06
tr|B5QJ43|B5QJ43_CAMJE Putative cell wall-associated hydrolase O...    47   7e-06

>tr|Q3BKH8|Q3BKH8_9PROT Putative uncharacterized protein
           OS=Magnetospirillum gryphiswaldense GN=mgI390 PE=4 SV=1
          Length = 76

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 38/59 (64%), Positives = 42/59 (71%)
 Frame = -2

Query: 225 RPKGWAVRPCKAVRELGSERRETVRSISGAGARALRGPFPSTRGPGRTHLWCTSCRARG 49
           R +G+   P K VRELG ERRETVRS+S  G   LRGP PSTRGPG T+LWCT C A G
Sbjct: 15  RSQGFGCSPIKVVRELGLERRETVRSLSTVGVGNLRGPVPSTRGPGWTYLWCTGCHANG 73


>tr|A6H5N5|A6H5N5_CYCTA Putative uncharacterized protein OS=Cycas
           taitungensis PE=4 SV=1
          Length = 107

 Score = 75.9 bits (185), Expect = 9e-13
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   DAFSSYPLRTWLPSVCRGHDNWYTRGASFPVLSY 104
           DAFSSYPLRTWLPSV RGHDNWYTRGASFPVLSY
Sbjct: 74  DAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 107


>tr|A5AX71|A5AX71_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_042745 PE=4 SV=1
          Length = 120

 Score = 75.9 bits (185), Expect = 9e-13
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +3

Query: 3   DAFSSYPLRTWLPSVCRGHDNWYTRGASFPVLSY 104
           DAFSSYPLRTWLPSV RGHDNWYTRGASFPVLSY
Sbjct: 87  DAFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 120


>tr|B2DUY1|B2DUY1_STRPN Putative uncharacterized protein
           OS=Streptococcus pneumoniae CDC0288-04 GN=SP28804_A0036
           PE=4 SV=1
          Length = 58

 Score = 73.9 bits (180), Expect = 4e-12
 Identities = 36/51 (70%), Positives = 39/51 (76%)
 Frame = -2

Query: 201 PCKAVRELGSERRETVRSISGAGARALRGPFPSTRGPGRTHLWCTSCRARG 49
           P KA RELGSERRETVRS+S AG   LRG  PSTRGP  T+ WCTSC A+G
Sbjct: 5   PIKAARELGSERRETVRSLSVAGVGNLRGSAPSTRGPEWTYRWCTSCLAKG 55


>tr|A4QMC4|A4QMC4_PINKO ORF107c OS=Pinus koraiensis PE=4 SV=1
          Length = 107

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = +3

Query: 6   AFSSYPLRTWLPSVCRGHDNWYTRGASFPVLSY 104
           AFSSYPLRTWLPSV RGHDNWYTRGASFPVLSY
Sbjct: 75  AFSSYPLRTWLPSVYRGHDNWYTRGASFPVLSY 107


>tr|Q3BAI1|Q3BAI1_PHAAO Putative uncharacterized protein rps12
           OS=Phalaenopsis aphrodite subsp. formosana GN=rps12 PE=4
           SV=1
          Length = 131

 Score = 72.8 bits (177), Expect = 8e-12
 Identities = 32/34 (94%), Positives = 32/34 (94%)
 Frame = +3

Query: 3   DAFSSYPLRTWLPSVCRGHDNWYTRGASFPVLSY 104
           DAFSSYPLRTWLPSV R HDNWYTRGASFPVLSY
Sbjct: 98  DAFSSYPLRTWLPSVYRRHDNWYTRGASFPVLSY 131


>tr|A7PTZ2|A7PTZ2_VITVI Chromosome chr7 scaffold_31, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023592001
           PE=4 SV=1
          Length = 67

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +3

Query: 3   DAFSSYPLRTWLPSVCRGHDNWYTRGASFPVLSY 104
           D F SYPLRTWLPSV RGH+NWYTRGASFP+LSY
Sbjct: 34  DVFKSYPLRTWLPSVYRGHNNWYTRGASFPILSY 67


>tr|A5ZYK7|A5ZYK7_9FIRM Putative uncharacterized protein
           OS=Ruminococcus obeum ATCC 29174 GN=RUMOBE_04124 PE=4
           SV=1
          Length = 68

 Score = 69.3 bits (168), Expect = 9e-11
 Identities = 35/53 (66%), Positives = 37/53 (69%)
 Frame = -2

Query: 225 RPKGWAVRPCKAVRELGSERRETVRSISGAGARALRGPFPSTRGPGRTHLWCT 67
           R +G    P KAVRELGSERRETVRS+SG G   LRG   STRGPG T  WCT
Sbjct: 15  RSQGLGCSPIKAVRELGSERRETVRSLSGVGVGYLRGAVLSTRGPGWTGRWCT 67


>tr|B2Q2E5|B2Q2E5_PROST Putative uncharacterized protein
           OS=Providencia stuartii ATCC 25827 GN=PROSTU_01441 PE=4
           SV=1
          Length = 51

 Score = 65.5 bits (158), Expect = 1e-09
 Identities = 30/47 (63%), Positives = 33/47 (70%)
 Frame = -2

Query: 189 VRELGSERRETVRSISGAGARALRGPFPSTRGPGRTHLWCTSCRARG 49
           VRELG ERRETVRS+S  G   L+G  PSTRGP  TH WC+ C A G
Sbjct: 2   VRELGLERRETVRSLSAVGVGRLKGAAPSTRGPEWTHRWCSGCHANG 48


>tr|B1SBJ6|B1SBJ6_9STRE Putative uncharacterized protein
           OS=Streptococcus infantarius subsp. infantarius ATCC
           BAA-102 GN=STRINF_00007 PE=4 SV=1
          Length = 77

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 35/63 (55%), Positives = 40/63 (63%)
 Frame = -2

Query: 237 GAVVRPKGWAVRPCKAVRELGSERRETVRSISGAGARALRGPFPSTRGPGRTHLWCTSCR 58
           G VV  KG A+   K  RE GSERRETV+S+S AG    RG    TRGP  T+ WCTSC 
Sbjct: 12  GLVVVLKGGAIVTLKQPREQGSERRETVQSLSVAGVGDFRGSARRTRGPEWTYRWCTSCL 71

Query: 57  ARG 49
           A+G
Sbjct: 72  AKG 74