BP913959
Clone id YMU001_000038_C09
Library
Length 457
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AACTGGAAGAATTCGCGGCCGCGAATTCAGGCAAGAAGCCTAAGGTGCTCAATACAGCAA
CAACAGACACTTTTCTAATGCAAGAGATTGTAGCTTTTCATGACTAAAAATCTTGCTCCG
CAATCACAAATCACAATTATACTCCACATGTGACCAGGGTTTGTGACCGCTGTGTTCATC
TCCCTCATCATGCTTTTGCACTTATCTCAACAAATGTTAATGGTATTGTCATGACCCCAG
GTCAAAGATGTAGGTAATTCCATGTCTCCAAGAGACAGAAGGGCAGAGCTGGAAGAGGTC
ATGGGCTGGTTAACGGCAAGGACGCCTACTCCTGAGTGTGACGAGAGGAATAGATCAGCC
CCTCTCGTTGGCTCTTCCATGATGCAAAAGAACCTTGCAACACCTCAATTGAAGCATGAG
AAGCTGGTATCAAACATGGGTAGCAAGATCGAAGAAC
■■Homology search results ■■ -
sp_hit_id Q1WTM3
Definition sp|Q1WTM3|ADEC_LACS1 Adenine deaminase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118)
Align length 78
Score (bit) 30.8
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913959|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_C09.
(429 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q1WTM3|ADEC_LACS1 Adenine deaminase OS=Lactobacillus salivari... 31 2.4
sp|Q02645|HTS_DROME Protein hu-li tai shao OS=Drosophila melanog... 30 4.1
sp|Q10124|PQE1_CAEEL Putative RNA exonuclease pqe-1 OS=Caenorhab... 30 5.3
sp|Q651V6|PIN2_ORYSJ Probable auxin efflux carrier component 2 O... 30 5.3
sp|P52957|AFLR_EMENI Sterigmatocystin biosynthesis regulatory pr... 30 5.3

>sp|Q1WTM3|ADEC_LACS1 Adenine deaminase OS=Lactobacillus salivarius
subsp. salivarius (strain UCC118) GN=ade PE=3 SV=1
Length = 578

Score = 30.8 bits (68), Expect = 2.4
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Frame = -3

Query: 349 EEPTRGADLFLSSHSGVGVLAVNQPMTSSSSA---LLSLGDMELPTSLTWGH-DNTINIC 182
E RG L L S L P+ +++++ LLS D++ T++ GH DN+I IC
Sbjct: 232 ERLARGMYLLLREGSVTQDLRKLLPIVNTANSRRCLLSGDDVQAKTAINKGHLDNSIRIC 291

Query: 181 *DKCKSMMREMNTAVTNP 128
D+ + + + A NP
Sbjct: 292 IDEGLNPITAIQMATLNP 309


>sp|Q02645|HTS_DROME Protein hu-li tai shao OS=Drosophila melanogaster
GN=hts PE=1 SV=2
Length = 1156

Score = 30.0 bits (66), Expect = 4.1
Identities = 16/60 (26%), Positives = 29/60 (48%)
Frame = +3

Query: 210 QVKDVGNSMSPRDRRAELEEVMGWLTARTPTPECDERNRSAPLVGSSMMQKNLATPQLKH 389
++ + ++ + R+AEL E A TP + AP SSM+ ++ + P+L H
Sbjct: 1022 EIHYISQQLAFKQRQAELHEQQTTSRAPIATPSFTTMHPPAPASSSSMVHRSNSAPELCH 1081


>sp|Q10124|PQE1_CAEEL Putative RNA exonuclease pqe-1 OS=Caenorhabditis
elegans GN=pqe-1 PE=2 SV=2
Length = 1647

Score = 29.6 bits (65), Expect = 5.3
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +3

Query: 231 SMSPRDRRAELEEVMGWLTARTPTPECDERNRSAPLVGSSMMQKNLA 371
S SP DRR E G + R +P ++R P SSM L+
Sbjct: 944 STSPNDRRKSRETPPGNRSMRRTSPSDGRKSRDTPTASSSMSSSTLS 990


>sp|Q651V6|PIN2_ORYSJ Probable auxin efflux carrier component 2
OS=Oryza sativa subsp. japonica GN=PIN2 PE=2 SV=1
Length = 630

Score = 29.6 bits (65), Expect = 5.3
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +3

Query: 228 NSMSPRDRRAELEEVMGWLTARTPTPECDERNRS--APLVGSSMMQKNLATPQLKH 389
N+M+PR E+ T+R PTP N++ + S M +A+P +H
Sbjct: 243 NAMTPRASNLTGVEIYSLQTSREPTPRASSFNQADFYAMFSGSKMASQMASPMAQH 298


>sp|P52957|AFLR_EMENI Sterigmatocystin biosynthesis regulatory
protein OS=Emericella nidulans GN=aflR PE=3 SV=2
Length = 433

Score = 29.6 bits (65), Expect = 5.3
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = -3

Query: 301 VGVLAVNQPMTSSSSALLSLGDMELPTSLTWGHDNTINIC*DKCKSMMREMNTAVTNPGH 122
+G L+V P +S L + + P+S T H ++IC D + PGH
Sbjct: 182 LGALSVADPSSSMMQGLEAPNAAQPPSSNTTSHSYCLSICLDTLMRLFPNAGANCERPGH 241


tr_hit_id A9SCG5
Definition tr|A9SCG5|A9SCG5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 31
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP913959|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_C09.
(429 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9SCG5|A9SCG5_PHYPA Predicted protein OS=Physcomitrella paten... 36 1.1
tr|Q2T5W0|Q2T5W0_BURTA Putative ABC transporter ATP-binding prot... 33 5.5
tr|B3DWI6|B3DWI6_METI4 Acyl-CoA synthetase (ADP forming) alpha a... 33 5.5
tr|B2PYC3|B2PYC3_PROST Putative uncharacterized protein OS=Provi... 33 7.2

>tr|A9SCG5|A9SCG5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_77499 PE=4 SV=1
Length = 137

Score = 35.8 bits (81), Expect = 1.1
Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Frame = +3

Query: 228 NSMSPRDRRAELEEVMGWL--TARTPTPECD 314
++ SPRD +++EVMGWL +A+TPTP D
Sbjct: 66 SATSPRDGPVDMDEVMGWLLTSAQTPTPTID 96


>tr|Q2T5W0|Q2T5W0_BURTA Putative ABC transporter ATP-binding protein
OS=Burkholderia thailandensis (strain E264 / ATCC 700388
/ DSM 13276 / CIP 106301) GN=BTH_II1243 PE=4 SV=1
Length = 572

Score = 33.5 bits (75), Expect = 5.5
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3

Query: 234 MSPRDRRAELEEVMGWLTARTPTPECDERN-RSAPLVGSSMMQKNLATP 377
+ P +A++EE+ W AR+P+ D N R AP+ S + ++ TP
Sbjct: 233 LDPNTTQAKVEEITAWAQARSPSTYLDTLNRRGAPIFISKNFEDDMFTP 281


>tr|B3DWI6|B3DWI6_METI4 Acyl-CoA synthetase (ADP forming) alpha and
beta chain OS=Methylacidiphilum infernorum (isolate V4)
GN=Minf_0021 PE=4 SV=1
Length = 908

Score = 33.5 bits (75), Expect = 5.5
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = -3

Query: 397 SFSCFN*GVARFFCIMEEPTRGADLFLSSHSGVGVLAVNQPMTSSSSALLSLGDMELPT- 221
SFS F +A FF PT + L++ G GVLA ++ + S L +L D L
Sbjct: 289 SFSEFF-SLASFFSQRPLPTGPRLVILTNAGGAGVLATDR-LVISGGELATLTDAALQRL 346

Query: 220 ----SLTWGHDNTINIC*DKCKSMMREMNTAVTNPGHMWSIIVI 101
L W H N ++I D R+ ++ H+ I+VI
Sbjct: 347 NAFLPLAWSHGNPVDILGDADAQRYRKALDILSEEEHVDGILVI 390


>tr|B2PYC3|B2PYC3_PROST Putative uncharacterized protein
OS=Providencia stuartii ATCC 25827 GN=PROSTU_03661 PE=4
SV=1
Length = 305

Score = 33.1 bits (74), Expect = 7.2
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = -2

Query: 425 FDLATHV*YQLLMLQLRCCKVLLHHGRANERG*SIPLVTLRSRR 294
FD V + L+ L L CC + L H R NE +P VT R +R
Sbjct: 262 FDWVKGVSFSLIWLGLLCCIIALLHKRYNEYHKRVPYVTGRDKR 305