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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913961
Clone id YMU001_000038_C11
Library
Length 617
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGCAGGTACTCGGCTTCCCTTCTGGTGGTATGGAACCGAGTCTCACTATTCAGTAGCTG
CTTTCATTCCCTCTCCAATCTGAGTTCACCTCTTCTCTTTGAGTAGGTCTACTTTGTGTT
GATGGGTTTAGGTTATGGCTGTCCCTGGAGTAGTTCGTTCAAAGCACCAAGTGTATGCTA
TTCTTAATTTTGCTCGTTGCTTTTCTTCCGGGTGTACTCTTGATCTTCCTCACCTAAACT
TGGCTCTGGGTCACTCATCATATCACTCTTTTCTATACAACTATTCCTTTAACCATTCTG
GGCACTGGCAATCCTCATTAACTATGGTGTCTCTAATCCTCATTGTCTATTGTGTCTCCG
ATGAGTCTTTAATCGCTCTCACTGAGTAGGTGTGGAGGTGCTTTTCATAAACGTTCCTTT
ACAATTCATGCTGCAAGCTGCATTCAGTACTTAACCTTACCTGTGAGCACTCCCTTGTCC
ACGCTTCTGTTGATTCGCTTTTGTTTTGACCATAAGATTATTAGCAAGTGCTCTGTCTAT
CTCTGCAAATTCCTCCTGAGTGCTCCTCTCCATGCTTATCTTCCTCGCCATGATTATCTT
CTATTGCGTGCTTGCCA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913961|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_C11.
         (617 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id Q9VTD4
Definition tr|Q9VTD4|Q9VTD4_DROME Fad2 OS=Drosophila melanogaster
Align length 52
Score (bit) 38.5
E-value 0.32
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913961|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_C11.
         (617 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9VTD4|Q9VTD4_DROME Fad2 OS=Drosophila melanogaster GN=Fad2 P...    39   0.32 
tr|Q9NFT2|Q9NFT2_DROME Fatty acid desaturase OS=Drosophila melan...    39   0.32 
tr|Q4V3U6|Q4V3U6_DROME IP02693p (Fragment) OS=Drosophila melanog...    39   0.32 
tr|A7DZ97|A7DZ97_DROME Desaturase OS=Drosophila melanogaster GN=...    39   0.32 
tr|B4JNE8|B4JNE8_DROGR GH24152 OS=Drosophila grimshawi GN=GH2415...    35   2.7  
tr|B4HDT7|B4HDT7_DROSE GM25238 OS=Drosophila sechellia GN=GM2523...    35   4.6  

>tr|Q9VTD4|Q9VTD4_DROME Fad2 OS=Drosophila melanogaster GN=Fad2 PE=2
           SV=1
          Length = 355

 Score = 38.5 bits (88), Expect = 0.32
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 175 MLFLILLVAFLPGVLLIFLT*TWLWVTHHITLFYTTIPLTILG-TGNPH*LW 327
           +LF+IL ++ L GV L+F + TW  V     LF+ T+ +TILG +G  H LW
Sbjct: 47  VLFVILHISSLYGVWLLFTSATWTTV----VLFWPTVVVTILGVSGGAHRLW 94


>tr|Q9NFT2|Q9NFT2_DROME Fatty acid desaturase OS=Drosophila
           melanogaster GN=Fad2 PE=2 SV=1
          Length = 355

 Score = 38.5 bits (88), Expect = 0.32
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 175 MLFLILLVAFLPGVLLIFLT*TWLWVTHHITLFYTTIPLTILG-TGNPH*LW 327
           +LF+IL ++ L GV L+F + TW  V     LF+ T+ +TILG +G  H LW
Sbjct: 47  VLFVILHISSLYGVWLLFTSATWTTV----VLFWPTVVVTILGVSGGAHRLW 94


>tr|Q4V3U6|Q4V3U6_DROME IP02693p (Fragment) OS=Drosophila
           melanogaster GN=Fad2 PE=2 SV=1
          Length = 339

 Score = 38.5 bits (88), Expect = 0.32
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 175 MLFLILLVAFLPGVLLIFLT*TWLWVTHHITLFYTTIPLTILG-TGNPH*LW 327
           +LF+IL ++ L GV L+F + TW  V     LF+ T+ +TILG +G  H LW
Sbjct: 48  VLFVILHISSLYGVWLLFTSATWTTV----VLFWPTVVVTILGVSGGAHRLW 95


>tr|A7DZ97|A7DZ97_DROME Desaturase OS=Drosophila melanogaster
           GN=desatF PE=3 SV=1
          Length = 355

 Score = 38.5 bits (88), Expect = 0.32
 Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = +1

Query: 175 MLFLILLVAFLPGVLLIFLT*TWLWVTHHITLFYTTIPLTILG-TGNPH*LW 327
           +LF+IL ++ L GV L+F + TW  V     LF+ T+ +TILG +G  H LW
Sbjct: 47  VLFVILHISSLYGVWLLFTSATWTTV----VLFWPTVVVTILGVSGGAHRLW 94


>tr|B4JNE8|B4JNE8_DROGR GH24152 OS=Drosophila grimshawi GN=GH24152
            PE=4 SV=1
          Length = 2464

 Score = 35.4 bits (80), Expect = 2.7
 Identities = 28/105 (26%), Positives = 41/105 (39%), Gaps = 4/105 (3%)
 Frame = -2

Query: 598  DNHGEEDKHGEEHSGGICRDRQSTC**SYGQNKSESTEAWTRECSQVRLSTECSL----Q 431
            D+ G+ D      S    R    +   S   N +   E   RE    RLS+ C +    Q
Sbjct: 2017 DSDGDSDSDSSCSSSSASRSSSGS---SSSMNSNSEAELQKREQQDARLSSNCGVCRRSQ 2073

Query: 430  HEL*RNVYEKHLHTYSVRAIKDSSETQ*TMRIRDTIVNEDCQCPE 296
            H   RN+ E ++  YS R     S  +   R+   + N + QC E
Sbjct: 2074 HRNARNMPEAYIRCYSCRRRVHPSCIEMPQRMVGRVRNYNWQCAE 2118


>tr|B4HDT7|B4HDT7_DROSE GM25238 OS=Drosophila sechellia GN=GM25238
           PE=4 SV=1
          Length = 354

 Score = 34.7 bits (78), Expect = 4.6
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +1

Query: 175 MLFLILLVAFLPGVLLIFLT*TWLWVTHHITLFYTTIPLTILG-TGNPH*LW 327
           +LFLIL ++ L GV L+F + TW        LF   + +TILG +G  H LW
Sbjct: 46  VLFLILHISSLYGVWLLFTSATWT----TFVLFSPAVVVTILGVSGGAHRLW 93