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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913973
Clone id YMU001_000038_D11
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_D11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCAATGCTTGATCAGTGAGGTAGAGGTAGATGTTTTTGTAATGCCTACTAAGGGGGAGAG
CTATCCACTAATCTTGGGAAGGCCATGGTTGATGGCCATGAAGGCAAAACAGAACTGGGG
TATTGGCCTTCTACGCATGACCGGTAAGAAAGGGGAGACAATCTACTACGACATGAAGAT
TGGCAAGCAGATGCAAATGAATCTGGAAACATCGACAGATGAAACCACTAGCGAATCTTC
CAGTTCTGAGGAGGAGACCACATCCACTGATGAAAGTGACAGTTCCATTGTTGTGATGGG
TATCATTATGAAGGATCCACAAAGGGTAAGCACACCTAGTGATCCATCACCAAAAGGGCA
ACCCAATGAAGAGGAGAGCAAATCACCTGGCCTAGGAGGAAGTAGGTTGAAGGGTATGTT
GCCTACGGAATTAACACTTGAGGAGAAAGATAGTTTTTTGCAAATGTTGATGGGATTTCC
TAACCTGTTCATTGATAACTATGAAAGAATCACAGGTATTACAGTGGTGGAACATCATAT
TAAGT
■■Homology search results ■■ -
sp_hit_id P05688
Definition sp|P05688|CHHB1_BOMMO Chorion class high-cysteine HCB protein 12 OS=Bombyx mori
Align length 76
Score (bit) 31.2
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913973|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_D11.
         (545 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P05688|CHHB1_BOMMO Chorion class high-cysteine HCB protein 12...    31   3.4  
sp|Q97LI1|Y580_CLOAB UPF0229 protein CA_C0580 OS=Clostridium ace...    31   4.4  
sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ub...    30   7.6  
sp|P16550|APA1_YEAST Protein APA1 OS=Saccharomyces cerevisiae GN...    30   7.6  

>sp|P05688|CHHB1_BOMMO Chorion class high-cysteine HCB protein 12
           OS=Bombyx mori PE=3 SV=1
          Length = 131

 Score = 31.2 bits (69), Expect = 3.4
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
 Frame = -3

Query: 534 CSTTVIPVILS*LSMNRLGNPINICKKLSFSSSVNSVGNIPFNLLPPRPGDLLSSSLGC- 358
           CS +  P  LS  S NR    + +C ++ F  + +  GN            + SS  GC 
Sbjct: 49  CSNSAAPTGLSICSENRYKGDVCVCGEVPFLGTADVCGN------------MCSSGCGCI 96

Query: 357 --PFGDGSLGVLTLCG 316
               G+G +G+   CG
Sbjct: 97  DYGCGNGCVGITRSCG 112


>sp|Q97LI1|Y580_CLOAB UPF0229 protein CA_C0580 OS=Clostridium
           acetobutylicum GN=CA_C0580 PE=3 SV=1
          Length = 391

 Score = 30.8 bits (68), Expect = 4.4
 Identities = 17/49 (34%), Positives = 24/49 (48%)
 Frame = +2

Query: 365 NEEESKSPGLGGSRLKGMLPTELTLEEKDSFLQMLMGFPNLFIDNYERI 511
           N  + K  G G S  + +  TE+T+EE  S+L   +  PNL    Y  I
Sbjct: 95  NGSKGKGKGAGNSEGEDIYETEVTIEEVFSYLLEDLNLPNLDKKKYSEI 143


>sp|Q9NIF3|UBQL_DICDI Ubiquilin OS=Dictyostelium discoideum GN=ubqln
           PE=1 SV=1
          Length = 523

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
 Frame = +2

Query: 320 QRVSTPSDPSPKGQPNEEESKSPGLGGSRLKGMLPTEL---TLEEKDSFLQMLMGFPNL 487
           Q+V TPS+  P+G P   ++ +  +    ++ M  + +    L+  D F  M+MG P +
Sbjct: 84  QQVPTPSNTQPQGIPGVPQNINDMMNNPMIQEMFNSRMMDSLLDNPDIFRDMMMGNPEM 142


>sp|P16550|APA1_YEAST Protein APA1 OS=Saccharomyces cerevisiae
           GN=APA1 PE=1 SV=4
          Length = 321

 Score = 30.0 bits (66), Expect = 7.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +2

Query: 296 MGIIMKDPQRVSTPSDPSPKGQPNEEESKSPGLGGS 403
           M  +++ P+R  TP    P G+P EE +  P  GG+
Sbjct: 48  MPSLIEKPERGQTPEGEDPLGKPEEELTVIPEFGGA 83
tr_hit_id B2KTD3
Definition tr|B2KTD3|B2KTD3_9CNID Nematocyst outer wall antigen OS=Clytia hemisphaerica
Align length 48
Score (bit) 40.4
E-value 0.062
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913973|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_D11.
         (545 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2KTD3|B2KTD3_9CNID Nematocyst outer wall antigen OS=Clytia h...    40   0.062
tr|A9RE89|A9RE89_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.2  
tr|A9RN68|A9RN68_PHYPA Predicted protein OS=Physcomitrella paten...    35   3.4  
tr|B7Y9U0|B7Y9U0_9BACI Putative uncharacterized protein OS=Geoba...    33   9.9  
tr|A9REQ8|A9REQ8_PHYPA Predicted protein OS=Physcomitrella paten...    33   9.9  
tr|A5B0D3|A5B0D3_VITVI Putative uncharacterized protein OS=Vitis...    33   9.9  

>tr|B2KTD3|B2KTD3_9CNID Nematocyst outer wall antigen OS=Clytia
           hemisphaerica PE=2 SV=1
          Length = 509

 Score = 40.4 bits (93), Expect = 0.062
 Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = -1

Query: 191 SACQSSCRSRLSPLSYRSCVEGQYPSSVL-PSWPSTMAFPRLVDSSPP 51
           S C + C +R +P+   +C  GQ P  V+ P+ P TMA P +V   PP
Sbjct: 374 STCSAGCPNRCAPMCQPTCCGGQQPIGVMPPAQPMTMAAPPMVPYMPP 421


>tr|A9RE89|A9RE89_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_64957 PE=4 SV=1
          Length = 939

 Score = 36.2 bits (82), Expect = 1.2
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 17  EVEVDVFVMPTKGESYPLILGRPWLMAMKAKQNWG 121
           +++  VF + +   SYP++L RPWL   KA  +WG
Sbjct: 759 KIDYVVFQLKSSALSYPILLVRPWLFHAKAHNDWG 793


>tr|A9RN68|A9RN68_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_68351 PE=4 SV=1
          Length = 276

 Score = 34.7 bits (78), Expect = 3.4
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +2

Query: 59  SYPLILGRPWLMAMKAKQNWGIGLL 133
           SYP++LGR WL   KAK +W  G L
Sbjct: 161 SYPILLGRLWLYQAKAKNDWSQGTL 185


>tr|B7Y9U0|B7Y9U0_9BACI Putative uncharacterized protein
           OS=Geobacillus sp. Y412MC61 GN=GYMC61DRAFT_1513 PE=4
           SV=1
          Length = 42

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = +2

Query: 308 MKDPQRVSTPSDPSPKGQPNEEESKSPGLGGSRLKG 415
           M+ P++ ++P     K QP+++  K PG G  +L+G
Sbjct: 1   MRQPKQNNSPEQQEKKQQPDKDREKQPGYGDKKLEG 36


>tr|A9REQ8|A9REQ8_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_65152 PE=4 SV=1
          Length = 159

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 18/58 (31%), Positives = 27/58 (46%)
 Frame = +2

Query: 5   CLISEVEVDVFVMPTKGESYPLILGRPWLMAMKAKQNWGIGLLRMTGKKGETIYYDMK 178
           C+I  V+     +      Y +ILGRPWL  + A  NW  G L++  ++       MK
Sbjct: 21  CIIVTVDFYFLEIIDSTGRYLVILGRPWLTEVNAVNNWKPGKLKIGPRRNRVRIRVMK 78


>tr|A5B0D3|A5B0D3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_002498 PE=4 SV=1
          Length = 635

 Score = 33.1 bits (74), Expect = 9.9
 Identities = 13/40 (32%), Positives = 29/40 (72%), Gaps = 2/40 (5%)
 Frame = +2

Query: 428 ELTLEEKDSFLQMLMGFPNLFIDNYERITGI--TVVEHHI 541
           +L+++E+DS  Q+L  + ++F  +YE + G+  ++V+HH+
Sbjct: 586 DLSIDERDSLAQLLRSYLDVFAWSYEDMLGLDPSIVQHHL 625