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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913974
Clone id YMU001_000038_D12
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ATGCAACATTAGAGGATCTTGAAAAACCAGGAGTGGATGATGAACCTCAGCCTGTAGCGT
TGAAATATGAAGAAGCTTACCAGTATCAAAATGTTTTTGGACCTTTGGTAAAGCTTGAAG
CAGATTATGACAAGATGATGAAAGAATCTCAAAGCAAGGACAAGTATTATCGTTCGCTGG
GATGTGGGTTTGAATAAGAAGCGTGTTGCATACTTTGTGTTCCCAAAGGAGGATAATGAG
CTTAGGCTTGTTCCTGGTGATGAACTGCGATTACGGTATCCTGGAGACAGCACTCACTCA
GCTTGGCAGTCAGTTGGCCATGTGATCAAGCTTACAGCACAAGAGGAGGTTGCTCTCGAG
TTGAGGGCAAGTCAGGGAGTCCCTATTGATGTCAATCACAATTTCAGTGTTGATTTTGTT
TGGAAGAGCACAAGTTTTGATAGGATGCAGGCAGCCATGAAGACACTCGCTGTAGACGAC
ACCAGTGTCAGCGGATACATTTATCATCGT
■■Homology search results ■■ -
sp_hit_id Q9FJR0
Definition sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana
Align length 123
Score (bit) 213.0
E-value 1.0e-78
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913974|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_D12.
         (510 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolo...   213   1e-78
sp|Q9HEH1|RENT1_NEUCR Regulator of nonsense transcripts 1 homolo...   125   2e-46
sp|Q9VYS3|RENT1_DROME Regulator of nonsense transcripts 1 homolo...   123   4e-44
sp|Q09820|RENT1_SCHPO Regulator of nonsense transcripts 1 homolo...   124   4e-40
sp|Q98TR3|RENT1_FUGRU Putative regulator of nonsense transcripts...   158   2e-38
sp|Q92900|RENT1_HUMAN Regulator of nonsense transcripts 1 OS=Hom...   152   9e-37
sp|Q9EPU0|RENT1_MOUSE Regulator of nonsense transcripts 1 OS=Mus...   150   3e-36
sp|P30771|NAM7_YEAST ATP-dependent helicase NAM7 OS=Saccharomyce...    89   1e-30
sp|O76512|RENT1_CAEEL Regulator of nonsense transcripts 1 OS=Cae...    72   3e-25
sp|Q94EY2|UFM1_CHLRE Probable ubiquitin-fold modifier 1 OS=Chlam...    33   0.77 
sp|Q9GKT8|CP086_MACFA Uncharacterized protein C16orf86 homolog O...    32   1.3  
sp|Q5PU89|UFM1_CHLIN Probable ubiquitin-fold modifier 1 OS=Chlam...    32   1.7  
sp|Q9TT16|CLCN6_RABIT Chloride channel protein 6 OS=Oryctolagus ...    32   2.3  
sp|Q5RJW4|UFM1_XENLA Ubiquitin-fold modifier 1 OS=Xenopus laevis...    31   2.9  
sp|Q12163|NBP2_YEAST NAP1-binding protein 2 OS=Saccharomyces cer...    31   2.9  
sp|O35454|CLCN6_MOUSE Chloride channel protein 6 OS=Mus musculus...    31   2.9  
sp|P51797|CLCN6_HUMAN Chloride channel protein 6 OS=Homo sapiens...    31   2.9  
sp|Q4V7T5|F54BB_XENLA Protein FAM54B-B OS=Xenopus laevis GN=fam5...    31   3.8  
sp|Q5BJP3|UFM1_RAT Ubiquitin-fold modifier 1 OS=Rattus norvegicu...    30   5.0  
sp|P57528|EX5C_BUCAI Exodeoxyribonuclease V gamma chain OS=Buchn...    30   5.0  
sp|Q9Y9X3|SYA_AERPE Alanyl-tRNA synthetase OS=Aeropyrum pernix G...    30   6.5  
sp|Q8R1B0|STAC2_MOUSE SH3 and cysteine-rich domain-containing pr...    30   6.5  
sp|Q6ZMT1|STAC2_HUMAN SH3 and cysteine-rich domain-containing pr...    30   6.5  
sp|Q3ZYG0|ASSY_DEHSC Argininosuccinate synthase OS=Dehalococcoid...    30   6.5  
sp|A5FQ73|ASSY_DEHSB Argininosuccinate synthase OS=Dehalococcoid...    30   6.5  
sp|Q3Z727|ASSY_DEHE1 Argininosuccinate synthase OS=Dehalococcoid...    30   6.5  
sp|P38322|YB76_YEAST Putative uncharacterized protein YBR226C OS...    30   6.6  
sp|Q5R4N5|UFM1_PONAB Ubiquitin-fold modifier 1 OS=Pongo abelii G...    30   8.5  
sp|Q94DM8|UFM1_ORYSJ Probable ubiquitin-fold modifier 1 OS=Oryza...    30   8.5  
sp|P61961|UFM1_MOUSE Ubiquitin-fold modifier 1 OS=Mus musculus G...    30   8.5  

>sp|Q9FJR0|RENT1_ARATH Regulator of nonsense transcripts 1 homolog
           OS=Arabidopsis thaliana GN=UPF1 PE=2 SV=2
          Length = 1254

 Score =  213 bits (541), Expect(2) = 1e-78
 Identities = 100/123 (81%), Positives = 112/123 (91%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  +++ ++ VRWD+GLNKKRVAYFVFPKE+NELRLVPGDELRLRY GD+ H +WQSVGH
Sbjct: 340 KESQSKENLTVRWDIGLNKKRVAYFVFPKEENELRLVPGDELRLRYSGDAVHPSWQSVGH 399

Query: 322 VIKLTAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSGYI 501
           VIKLTAQEEVALELRA+QGVPIDVNH FSVDFVWKSTSFDRMQ AMK  AVD+TSVSGYI
Sbjct: 400 VIKLTAQEEVALELRANQGVPIDVNHGFSVDFVWKSTSFDRMQGAMKNFAVDETSVSGYI 459

Query: 502 YHR 510
           YH+
Sbjct: 460 YHQ 462



 Score =  100 bits (250), Expect(2) = 1e-78
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           ATLEDLEKPGVDDEPQPV  KYE+AYQYQNVF PL+KLEADYDKMMKESQSK+
Sbjct: 294 ATLEDLEKPGVDDEPQPVQPKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKE 346


>sp|Q9HEH1|RENT1_NEUCR Regulator of nonsense transcripts 1 homolog
           OS=Neurospora crassa GN=2E4.130 PE=3 SV=1
          Length = 1093

 Score =  125 bits (315), Expect(2) = 2e-46
 Identities = 64/129 (49%), Positives = 88/129 (68%), Gaps = 6/129 (4%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYPGDSTHSAWQSVG 318
           K  ++   + VRW +GLN K VA F+ PK E  +++L  GDE+RL+Y G+     W+ VG
Sbjct: 302 KEAQSEDGLQVRWHLGLNSKHVASFILPKIESGDVKLAVGDEMRLKYKGE-LRPPWEGVG 360

Query: 319 HVIKL--TAQEEVALELRAS---QGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDT 483
           +VIK+     +EV +ELR S   + VP +  HNFS D+VWK+TS+DRMQ AMKT AVD+ 
Sbjct: 361 YVIKIPNNQSDEVEVELRKSANDKSVPTECTHNFSADYVWKATSYDRMQLAMKTFAVDEM 420

Query: 484 SVSGYIYHR 510
           SVSGYI+H+
Sbjct: 421 SVSGYIFHK 429



 Score = 80.1 bits (196), Expect(2) = 2e-46
 Identities = 36/54 (66%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
 Frame = +3

Query: 3   ATLEDLEKP-GVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           AT+ DLEK  GVDD+P PV LKY++ Y YQN+FGPLVK+E+DYDK +KE+QS+D
Sbjct: 255 ATVADLEKTAGVDDDPHPVLLKYDDPYHYQNIFGPLVKMESDYDKKLKEAQSED 308


>sp|Q9VYS3|RENT1_DROME Regulator of nonsense transcripts 1 homolog
           OS=Drosophila melanogaster GN=Upf1 PE=1 SV=2
          Length = 1180

 Score =  123 bits (309), Expect(2) = 4e-44
 Identities = 60/125 (48%), Positives = 83/125 (66%), Gaps = 2/125 (1%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K    + +I VRWDVGLNKK +AYF   K D++++L+ GDELRL Y G+  ++ W  +GH
Sbjct: 298 KESATQENIEVRWDVGLNKKTIAYFTLAKTDSDMKLMHGDELRLHYVGE-LYNPWSEIGH 356

Query: 322 VIKLTAQ--EEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSG 495
           VIK+     ++V LEL++S   P+    NF+VDF+WK TSFDRM  A+   A+D  SVS 
Sbjct: 357 VIKVPDNFGDDVGLELKSSTNAPVKCTSNFTVDFIWKCTSFDRMTRALCKFAIDRNSVSN 416

Query: 496 YIYHR 510
           +IY R
Sbjct: 417 FIYSR 421



 Score = 74.7 bits (182), Expect(2) = 4e-44
 Identities = 31/53 (58%), Positives = 43/53 (81%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           AT +DLEKPG+D EP  V L+YE+ YQY+  FGPLV+LEA+YD+ +KES +++
Sbjct: 252 ATFQDLEKPGIDSEPAHVLLRYEDGYQYEKTFGPLVRLEAEYDQKLKESATQE 304


>sp|Q09820|RENT1_SCHPO Regulator of nonsense transcripts 1 homolog
           OS=Schizosaccharomyces pombe GN=SPAC16C9.06c PE=2 SV=2
          Length = 925

 Score =  124 bits (311), Expect(2) = 4e-40
 Identities = 59/126 (46%), Positives = 85/126 (67%), Gaps = 3/126 (2%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYPGDSTHSAWQSVG 318
           K  + +  ++VRWD  +NK+  A+F+ PK E  E+RL  GDE++L Y G+   + W S G
Sbjct: 242 KESQTQKDVVVRWDQAINKRYTAWFLLPKLESGEIRLAIGDEMKLTYEGE-LRAPWSSTG 300

Query: 319 HVIKL--TAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVS 492
           +VIK+     +EV LEL+ S  VPI+  HNFSVD+VWKSTSFDRMQ A++  A D + +S
Sbjct: 301 YVIKIPNNVSDEVGLELKRSDKVPIECTHNFSVDYVWKSTSFDRMQTALRLFATDGSRLS 360

Query: 493 GYIYHR 510
            ++YH+
Sbjct: 361 SFLYHK 366



 Score = 60.5 bits (145), Expect(2) = 4e-40
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSK 158
           A LEDL+KP  DD    V L+Y++A+ YQ V  PL++ EADYDK +KESQ++
Sbjct: 196 ANLEDLDKPIEDDSLPSVELRYKDAHAYQAVLSPLIQAEADYDKRLKESQTQ 247


>sp|Q98TR3|RENT1_FUGRU Putative regulator of nonsense transcripts 1
           OS=Fugu rubripes GN=rent1 PE=3 SV=1
          Length = 1097

 Score =  158 bits (399), Expect = 2e-38
 Identities = 73/125 (58%), Positives = 97/125 (77%), Gaps = 2/125 (1%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  + + +I VRWD+GLNKKR+AYF  PK D+++RL+ GDE+ LRY GD     W+ +GH
Sbjct: 303 KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSDMRLMQGDEICLRYKGDLA-PLWKGIGH 361

Query: 322 VIKLTAQ--EEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSG 495
           VIK+     +E+A+ELR S G P+++ HN+ VDFVWKSTSFDRMQ+A+KT AVD+TSVSG
Sbjct: 362 VIKVPDSYGDEIAIELRTSVGAPVEIPHNYQVDFVWKSTSFDRMQSALKTFAVDETSVSG 421

Query: 496 YIYHR 510
           YIYH+
Sbjct: 422 YIYHK 426



 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 46/75 (61%), Positives = 55/75 (73%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKDKYYRSLG 182
           ATLEDLEKPGVD+EPQ V L+YE+AYQYQN+FGPLVKLEADYDK +KESQ++D       
Sbjct: 257 ATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWD 316

Query: 183 CGFE*EACCILCVPK 227
            G   +      +PK
Sbjct: 317 LGLNKKRIAYFTLPK 331


>sp|Q92900|RENT1_HUMAN Regulator of nonsense transcripts 1 OS=Homo
           sapiens GN=UPF1 PE=1 SV=2
          Length = 1129

 Score =  152 bits (384), Expect = 9e-37
 Identities = 75/136 (55%), Positives = 98/136 (72%), Gaps = 13/136 (9%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYPGD 288
           K  + + +I VRWD+GLNKKR+AYF  PK D+           ++RL+ GDE+ LRY GD
Sbjct: 321 KESQTQDNITVRWDLGLNKKRIAYFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGD 380

Query: 289 STHSAWQSVGHVIKLTAQ--EEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMK 462
                W+ +GHVIK+     +E+A+ELR+S G P++V HNF VDFVWKSTSFDRMQ+A+K
Sbjct: 381 LA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALK 439

Query: 463 TLAVDDTSVSGYIYHR 510
           T AVD+TSVSGYIYH+
Sbjct: 440 TFAVDETSVSGYIYHK 455



 Score = 95.5 bits (236), Expect = 1e-19
 Identities = 46/75 (61%), Positives = 55/75 (73%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKDKYYRSLG 182
           ATLEDLEKPGVD+EPQ V L+YE+AYQYQN+FGPLVKLEADYDK +KESQ++D       
Sbjct: 275 ATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWD 334

Query: 183 CGFE*EACCILCVPK 227
            G   +      +PK
Sbjct: 335 LGLNKKRIAYFTLPK 349


>sp|Q9EPU0|RENT1_MOUSE Regulator of nonsense transcripts 1 OS=Mus
           musculus GN=Upf1 PE=1 SV=2
          Length = 1124

 Score =  150 bits (380), Expect = 3e-36
 Identities = 74/136 (54%), Positives = 98/136 (72%), Gaps = 13/136 (9%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDN-----------ELRLVPGDELRLRYPGD 288
           K  + + +I VRWD+GLNKKR+A+F  PK D+           ++RL+ GDE+ LRY GD
Sbjct: 316 KESQTQDNITVRWDLGLNKKRIAFFTLPKTDSGNEDLVIIWLRDMRLMQGDEICLRYKGD 375

Query: 289 STHSAWQSVGHVIKLTAQ--EEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMK 462
                W+ +GHVIK+     +E+A+ELR+S G P++V HNF VDFVWKSTSFDRMQ+A+K
Sbjct: 376 LA-PLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHNFQVDFVWKSTSFDRMQSALK 434

Query: 463 TLAVDDTSVSGYIYHR 510
           T AVD+TSVSGYIYH+
Sbjct: 435 TFAVDETSVSGYIYHK 450



 Score = 95.9 bits (237), Expect = 1e-19
 Identities = 46/75 (61%), Positives = 55/75 (73%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKDKYYRSLG 182
           ATLEDLEKPGVD+EPQ V L+YE+AYQYQN+FGPLVKLEADYDK +KESQ++D       
Sbjct: 270 ATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQTQDNITVRWD 329

Query: 183 CGFE*EACCILCVPK 227
            G   +      +PK
Sbjct: 330 LGLNKKRIAFFTLPK 344


>sp|P30771|NAM7_YEAST ATP-dependent helicase NAM7 OS=Saccharomyces
           cerevisiae GN=NAM7 PE=1 SV=1
          Length = 971

 Score = 89.0 bits (219), Expect(2) = 1e-30
 Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 4/127 (3%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYPGDSTHSAWQSVG 318
           K  +A   I V W + LN + +A F     E NEL++  GDE+ L Y G   H  W+  G
Sbjct: 257 KESQALEHISVSWSLALNNRHLASFTLSTFESNELKVAIGDEMILWYSG-MQHPDWEGRG 315

Query: 319 HVIKL--TAQEEVALELRASQGVP-IDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSV 489
           ++++L  + Q+   LEL+ S+  P   +   F+ +F+WK TS+DRMQ A+K  A+D  S+
Sbjct: 316 YIVRLPNSFQDTFTLELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSI 375

Query: 490 SGYIYHR 510
           SGY+Y++
Sbjct: 376 SGYLYYK 382



 Score = 63.9 bits (154), Expect(2) = 1e-30
 Identities = 26/51 (50%), Positives = 39/51 (76%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQS 155
           AT+ D++ P   +   P+ L+Y++AY+YQ  +GPL+KLEADYDK +KESQ+
Sbjct: 211 ATINDIDAPEEQEAIPPLLLRYQDAYEYQRSYGPLIKLEADYDKQLKESQA 261


>sp|O76512|RENT1_CAEEL Regulator of nonsense transcripts 1
           OS=Caenorhabditis elegans GN=smg-2 PE=1 SV=1
          Length = 1069

 Score = 72.0 bits (175), Expect(2) = 3e-25
 Identities = 39/117 (33%), Positives = 65/117 (55%), Gaps = 4/117 (3%)
 Frame = +1

Query: 172 VRWDVGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYPGDSTHSAWQSVGHVIKLTAQ-- 342
           VRW+ GL +  +A+F  P+  D  ++L  GDELRL++      S W  +G V K+     
Sbjct: 303 VRWEQGLRQSVLAFFHLPQFADGVMKLAKGDELRLKHSQTVDGSEWTKIGSVFKIPDNHG 362

Query: 343 EEVALELRASQGVPI-DVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSGYIYHR 510
           +EV +E+R +    + +    F+VD VW +T+F+R   A+  L  D  ++S Y+Y +
Sbjct: 363 DEVGIEIRGAVDKSVMESRIMFTVDVVWNATTFERQYKALAALLNDSKAISPYLYQK 419



 Score = 63.2 bits (152), Expect(2) = 3e-25
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSK 158
           AT++DL KPG+D EP  V L+Y +A+ Y  VF PLV +EA+YD+ +KES S+
Sbjct: 247 ATVDDLNKPGLDREPDHVQLRYVDAHHYSKVFRPLVAIEAEYDRRVKESASQ 298


>sp|Q94EY2|UFM1_CHLRE Probable ubiquitin-fold modifier 1
           OS=Chlamydomonas reinhardtii GN=PR46a PE=3 SV=1
          Length = 96

 Score = 33.1 bits (74), Expect = 0.77
 Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
 Frame = +1

Query: 154 ARTSIIVRWD-VGLNKKRVAYFVFPKEDNELRLVPGDEL 267
           A+TS I+  D VG+N +++A  VF K  +ELRL+P D +
Sbjct: 51  AQTSAIITNDGVGINPQQIAGNVFLKHGSELRLIPRDRV 89
tr_hit_id A7PCF0
Definition tr|A7PCF0|A7PCF0_VITVI Chromosome chr2 scaffold_11, whole genome shotgun sequence OS=Vitis vinifera
Align length 122
Score (bit) 217.0
E-value 3.0e-80
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913974|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_D12.
         (510 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7PCF0|A7PCF0_VITVI Chromosome chr2 scaffold_11, whole genome...   217   3e-80
tr|A3BK00|A3BK00_ORYSJ Putative uncharacterized protein OS=Oryza...   219   6e-80
tr|Q69VT5|Q69VT5_ORYSJ Putative type 1 RNA helicase OS=Oryza sat...   219   6e-80
tr|B8B6D2|B8B6D2_ORYSI Putative uncharacterized protein OS=Oryza...   219   6e-80
tr|Q0D6B1|Q0D6B1_ORYSJ Os07g0495900 protein (Fragment) OS=Oryza ...   219   6e-80
tr|A7TUH3|A7TUH3_9SOLA UPF1 (Fragment) OS=Nicotiana attenuata PE...   211   4e-77
tr|Q4SF11|Q4SF11_TETNG Chromosome 1 SCAF14609, whole genome shot...   152   8e-57
tr|Q4PI26|Q4PI26_USTMA Putative uncharacterized protein OS=Ustil...   136   1e-49
tr|B0WYS1|B0WYS1_CULQU Nonsense-mediated mRNA decay protein 1 OS...   135   7e-49
tr|Q16NZ5|Q16NZ5_AEDAE Nonsense-mediated mrna decay protein 1 (R...   135   1e-48
tr|A6QTP5|A6QTP5_AJECN ATP-dependent helicase NAM7 OS=Ajellomyce...   130   1e-48
tr|Q1DS86|Q1DS86_COCIM Putative uncharacterized protein OS=Cocci...   130   2e-48
tr|B6H5A7|B6H5A7_PENCH Pc13g12330 protein OS=Penicillium chrysog...   130   4e-48
tr|Q5BFN4|Q5BFN4_EMENI Putative uncharacterized protein OS=Emeri...   132   1e-47
tr|B8M268|B8M268_9EURO Nonsense transcript regulator, putative O...   129   2e-47
tr|B6QCK9|B6QCK9_PENMA Nonsense transcript regulator, putative O...   129   2e-47
tr|Q2UCH7|Q2UCH7_ASPOR RNA helicase nonsense mRNA reducing facto...   132   2e-47
tr|Q0D0N3|Q0D0N3_ASPTN ATP-dependent helicase NAM7 OS=Aspergillu...   132   2e-47
tr|B8N676|B8N676_ASPFL Regulator of nonsense transcripts, putati...   132   2e-47
tr|A2QRH3|A2QRH3_ASPNC Contig An08c0130, complete genome OS=Aspe...   132   2e-47
tr|Q6MYI2|Q6MYI2_ASPFU Regulator of nonsense transcripts, putati...   132   2e-47
tr|B0XR92|B0XR92_ASPFC Regulator of nonsense transcripts, putati...   132   2e-47
tr|A1D2B4|A1D2B4_NEOFI Regulator of nonsense transcripts, putati...   132   2e-47
tr|A1CPF6|A1CPF6_ASPCL Regulator of nonsense transcripts, putati...   132   2e-47
tr|Q8TFW3|Q8TFW3_ASPFU Possible regulator of nonsense transcript...   132   2e-47
tr|A7E6P6|A7E6P6_SCLS1 Putative uncharacterized protein OS=Scler...   126   4e-47
tr|A6S6M8|A6S6M8_BOTFB Putative uncharacterized protein OS=Botry...   126   5e-47
tr|Q2GY88|Q2GY88_CHAGB Putative uncharacterized protein OS=Chaet...   131   5e-47
tr|Q7PWZ4|Q7PWZ4_ANOGA AGAP001133-PA (Fragment) OS=Anopheles gam...   127   1e-46
tr|B2B731|B2B731_PODAN Predicted CDS Pa_2_9730 OS=Podospora anse...   129   1e-46

>tr|A7PCF0|A7PCF0_VITVI Chromosome chr2 scaffold_11, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00015835001
           PE=4 SV=1
          Length = 1267

 Score =  217 bits (553), Expect(2) = 3e-80
 Identities = 101/122 (82%), Positives = 112/122 (91%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  +++ ++ +RWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRY GD+ H AWQSVGH
Sbjct: 325 KESQSKDNVTIRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGH 384

Query: 322 VIKLTAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSGYI 501
           VIKLTAQEEVALELRASQGVP+DVNH FSVDFVWKSTSFDRMQ AMKT AVD+TSVSGYI
Sbjct: 385 VIKLTAQEEVALELRASQGVPVDVNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYI 444

Query: 502 YH 507
           YH
Sbjct: 445 YH 446



 Score =  105 bits (261), Expect(2) = 3e-80
 Identities = 48/53 (90%), Positives = 52/53 (98%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           A+LEDLEKPGVDDEPQP+ALKYE+AYQYQNVF PL+KLEADYDKMMKESQSKD
Sbjct: 279 ASLEDLEKPGVDDEPQPIALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKD 331


>tr|A3BK00|A3BK00_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_023372 PE=4 SV=1
          Length = 1289

 Score =  219 bits (557), Expect(2) = 6e-80
 Identities = 103/122 (84%), Positives = 113/122 (92%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  +++ S+ VRWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRY GDS+H AWQSVGH
Sbjct: 364 KESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGH 423

Query: 322 VIKLTAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSGYI 501
           VIKLTAQEEVALELRASQGVP+D+NH FSVDFVWKSTSFDRMQ AMKT AVD+TSVSGYI
Sbjct: 424 VIKLTAQEEVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYI 483

Query: 502 YH 507
           YH
Sbjct: 484 YH 485



 Score =  102 bits (254), Expect(2) = 6e-80
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           A+LEDLEKPGVDDEPQ VALKYE+AYQYQNVF PL+KLEADYDKMMKESQSKD
Sbjct: 318 ASLEDLEKPGVDDEPQQVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKD 370


>tr|Q69VT5|Q69VT5_ORYSJ Putative type 1 RNA helicase OS=Oryza sativa
           subsp. japonica GN=OJ1457_D07.109-1 PE=4 SV=1
          Length = 1277

 Score =  219 bits (557), Expect(2) = 6e-80
 Identities = 103/122 (84%), Positives = 113/122 (92%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  +++ S+ VRWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRY GDS+H AWQSVGH
Sbjct: 364 KESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGH 423

Query: 322 VIKLTAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSGYI 501
           VIKLTAQEEVALELRASQGVP+D+NH FSVDFVWKSTSFDRMQ AMKT AVD+TSVSGYI
Sbjct: 424 VIKLTAQEEVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYI 483

Query: 502 YH 507
           YH
Sbjct: 484 YH 485



 Score =  102 bits (254), Expect(2) = 6e-80
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           A+LEDLEKPGVDDEPQ VALKYE+AYQYQNVF PL+KLEADYDKMMKESQSKD
Sbjct: 318 ASLEDLEKPGVDDEPQQVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKD 370


>tr|B8B6D2|B8B6D2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_26082 PE=4 SV=1
          Length = 1277

 Score =  219 bits (557), Expect(2) = 6e-80
 Identities = 103/122 (84%), Positives = 113/122 (92%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  +++ S+ VRWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRY GDS+H AWQSVGH
Sbjct: 364 KESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGH 423

Query: 322 VIKLTAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSGYI 501
           VIKLTAQEEVALELRASQGVP+D+NH FSVDFVWKSTSFDRMQ AMKT AVD+TSVSGYI
Sbjct: 424 VIKLTAQEEVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYI 483

Query: 502 YH 507
           YH
Sbjct: 484 YH 485



 Score =  102 bits (254), Expect(2) = 6e-80
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           A+LEDLEKPGVDDEPQ VALKYE+AYQYQNVF PL+KLEADYDKMMKESQSKD
Sbjct: 318 ASLEDLEKPGVDDEPQQVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKD 370


>tr|Q0D6B1|Q0D6B1_ORYSJ Os07g0495900 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os07g0495900 PE=4 SV=1
          Length = 1121

 Score =  219 bits (557), Expect(2) = 6e-80
 Identities = 103/122 (84%), Positives = 113/122 (92%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  +++ S+ VRWD+GLNKKR+AYFVFPKEDNELRLVPGDELRLRY GDS+H AWQSVGH
Sbjct: 208 KESQSKDSLTVRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDSSHPAWQSVGH 267

Query: 322 VIKLTAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSGYI 501
           VIKLTAQEEVALELRASQGVP+D+NH FSVDFVWKSTSFDRMQ AMKT AVD+TSVSGYI
Sbjct: 268 VIKLTAQEEVALELRASQGVPVDLNHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYI 327

Query: 502 YH 507
           YH
Sbjct: 328 YH 329



 Score =  102 bits (254), Expect(2) = 6e-80
 Identities = 48/53 (90%), Positives = 51/53 (96%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           A+LEDLEKPGVDDEPQ VALKYE+AYQYQNVF PL+KLEADYDKMMKESQSKD
Sbjct: 162 ASLEDLEKPGVDDEPQQVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKD 214


>tr|A7TUH3|A7TUH3_9SOLA UPF1 (Fragment) OS=Nicotiana attenuata PE=2
           SV=1
          Length = 473

 Score =  211 bits (537), Expect(2) = 4e-77
 Identities = 98/122 (80%), Positives = 110/122 (90%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  +++ ++ +RWD+GLNKKRVAYFVFPKEDNELRLVPGDELRLRY GD+ H AWQSVGH
Sbjct: 130 KESQSKDNLTIRWDIGLNKKRVAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGH 189

Query: 322 VIKLTAQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSGYI 501
           V+KLTAQEEVALELR SQGVP+DV H  SVDFVWKSTSFDRMQ+AMKT AVD+TSVSGYI
Sbjct: 190 VVKLTAQEEVALELRVSQGVPVDVTHGLSVDFVWKSTSFDRMQSAMKTFAVDETSVSGYI 249

Query: 502 YH 507
           YH
Sbjct: 250 YH 251



 Score =  100 bits (249), Expect(2) = 4e-77
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           ATLEDLEKPGVD EPQPVALKYE+A QYQN+F PL+KLEADYDKMMKESQSKD
Sbjct: 84  ATLEDLEKPGVDGEPQPVALKYEDACQYQNIFAPLIKLEADYDKMMKESQSKD 136


>tr|Q4SF11|Q4SF11_TETNG Chromosome 1 SCAF14609, whole genome shotgun
           sequence. (Fragment) OS=Tetraodon nigroviridis
           GN=GSTENG00019303001 PE=4 SV=1
          Length = 1186

 Score =  152 bits (383), Expect(2) = 8e-57
 Identities = 74/132 (56%), Positives = 96/132 (72%), Gaps = 14/132 (10%)
 Frame = +1

Query: 157 RTSIIVRWDVGLNKKRVAYFVFPKEDN------------ELRLVPGDELRLRYPGDSTHS 300
           RT I VRWD+GLNKKR+AYF  PK D+            ++RL+ GDE+ LRY GD    
Sbjct: 308 RTDITVRWDLGLNKKRIAYFTLPKTDSGVYSFHSLPLSLDMRLMQGDEICLRYKGDLA-P 366

Query: 301 AWQSVGHVIKLTAQ--EEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAV 474
            W+ +GHVIK+     +E+A+ELR+S G P+++ HN+ VDFVWKSTSFDRMQ+A+KT AV
Sbjct: 367 LWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEIPHNYQVDFVWKSTSFDRMQSALKTFAV 426

Query: 475 DDTSVSGYIYHR 510
           D+TSVSGYIYH+
Sbjct: 427 DETSVSGYIYHK 438



 Score = 92.0 bits (227), Expect(2) = 8e-57
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQ 152
           ATLEDLEKPGVD+EPQ V L+YE+AYQYQN+FGPLVKLEADYDK +KESQ
Sbjct: 256 ATLEDLEKPGVDEEPQHVLLRYEDAYQYQNIFGPLVKLEADYDKKLKESQ 305


>tr|Q4PI26|Q4PI26_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM00237.1 PE=4 SV=1
          Length = 1088

 Score =  136 bits (342), Expect(2) = 1e-49
 Identities = 67/126 (53%), Positives = 88/126 (69%), Gaps = 3/126 (2%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPK-EDNELRLVPGDELRLRYPGDSTHSAWQSVG 318
           K  + +  +++RWD GLN+K++A+ + PK E  E+RL  GDEL+LRY G+     W+ VG
Sbjct: 329 KESQTQQDLVIRWDQGLNQKKIAWMMLPKLESGEVRLAVGDELKLRYRGEMA-PPWEGVG 387

Query: 319 HVIKLT--AQEEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVS 492
           HVIK+     +EVALEL  + GVP    HNF  DFVWK+TSFDRMQ AMKT AVD+ S+S
Sbjct: 388 HVIKIPNHVSDEVALELNRADGVPDHCTHNFFADFVWKATSFDRMQNAMKTFAVDEQSLS 447

Query: 493 GYIYHR 510
            YIYH+
Sbjct: 448 AYIYHK 453



 Score = 84.0 bits (206), Expect(2) = 1e-49
 Identities = 35/52 (67%), Positives = 48/52 (92%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSK 158
           A+L+DL+KPGV++EP  V L+YE+AYQYQN+FGPLVK+EADYD+ +KESQ++
Sbjct: 283 ASLDDLDKPGVEEEPDSVLLRYEDAYQYQNIFGPLVKMEADYDRKLKESQTQ 334


>tr|B0WYS1|B0WYS1_CULQU Nonsense-mediated mRNA decay protein 1
           OS=Culex quinquefasciatus GN=CpipJ_CPIJ012300 PE=4 SV=1
          Length = 1136

 Score =  135 bits (341), Expect(2) = 7e-49
 Identities = 65/125 (52%), Positives = 86/125 (68%), Gaps = 2/125 (1%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  + + +I +RWD GLNKK +AYF   K D +++L+ GDELRLRY G+  H  W  VGH
Sbjct: 320 KESQTQENIEIRWDTGLNKKTIAYFTLAKNDGDMKLMHGDELRLRYNGE-LHKPWSCVGH 378

Query: 322 VIKLTAQ--EEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSG 495
           VIK+     E+V LEL+ +   P++ + NF+VDF+WK TSFDRMQ A++  AVDD SVS 
Sbjct: 379 VIKVPDNYGEDVGLELKHNHQAPVECSSNFAVDFIWKGTSFDRMQMALRKFAVDDNSVSN 438

Query: 496 YIYHR 510
           YIY R
Sbjct: 439 YIYSR 443



 Score = 81.6 bits (200), Expect(2) = 7e-49
 Identities = 35/53 (66%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           AT +DLEKPG+D E  PV  +Y + YQYQN+FGPLVKLEADYDK +KESQ+++
Sbjct: 274 ATFQDLEKPGIDKEHSPVQFRYVDGYQYQNIFGPLVKLEADYDKRLKESQTQE 326


>tr|Q16NZ5|Q16NZ5_AEDAE Nonsense-mediated mrna decay protein 1
           (Rent1) OS=Aedes aegypti GN=AAEL011817 PE=4 SV=1
          Length = 1121

 Score =  135 bits (339), Expect(2) = 1e-48
 Identities = 65/125 (52%), Positives = 85/125 (68%), Gaps = 2/125 (1%)
 Frame = +1

Query: 142 KNLKARTSIIVRWDVGLNKKRVAYFVFPKEDNELRLVPGDELRLRYPGDSTHSAWQSVGH 321
           K  + + +I +RWD GLN+K +AYF   K D +++L+ GDELRLRY G+  H  W  VGH
Sbjct: 308 KESQTQENIEIRWDTGLNRKTIAYFTLAKNDGDMKLMHGDELRLRYTGE-LHKPWSCVGH 366

Query: 322 VIKLTAQ--EEVALELRASQGVPIDVNHNFSVDFVWKSTSFDRMQAAMKTLAVDDTSVSG 495
           VIK+     E+V LEL+ +   PI+   NF+VDF+WK TSFDRMQ A++  AVDD SVS 
Sbjct: 367 VIKVPDNYGEDVGLELKHNHQAPIECTSNFAVDFIWKGTSFDRMQMALRKFAVDDNSVSN 426

Query: 496 YIYHR 510
           YIY R
Sbjct: 427 YIYSR 431



 Score = 81.6 bits (200), Expect(2) = 1e-48
 Identities = 35/53 (66%), Positives = 44/53 (83%)
 Frame = +3

Query: 3   ATLEDLEKPGVDDEPQPVALKYEEAYQYQNVFGPLVKLEADYDKMMKESQSKD 161
           AT +DLEKPG+D EP  V  +Y + YQYQN+FGPLVKLEADYDK +KESQ+++
Sbjct: 262 ATFQDLEKPGIDKEPAQVLFRYVDGYQYQNIFGPLVKLEADYDKRLKESQTQE 314