BP913981 |
Clone id |
YMU001_000038_E08 |
Library |
YMU01 |
Length |
425 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000038_E08. |
Accession |
BP913981 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2930Contig1 |
Sequence |
AAATGTTTGCACGCCTTCCTCTGTATCTAAGGCATGATCCTTAACCTTTCTGGACACATA TTGCTCTTCTGCAAGCACTTACCCAGACATTTATTCCCTCATTAAGCCATGGACCTTACC AAACTTCTCCGCAGCCTCCTTTGCTGACCCTTGCATAGAGAGGCAAACACCATGCATGTA CGCAAAAAATGCCCGAGACCACACACTGTCTTTCTCCAGCTCCTCCCAGCACTTTCGTGC ATCCTCCCATTCAAGCTGTAGCATATAGCTTACACCTAATTCATACACCCAAGCATGACG TAACTTGAAAAATTTCGATTCCGCAGTCAAATGCAAGCCCTCATCTAGCTTCAAAAAGCT TTGGATTGAACCCTCTAAATCTCCTTTGAGACGTTGCAGGCGCCCTTTGTAAAAGCTTAA AAAGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1LXE6 |
Definition |
sp|Q1LXE6|TT39C_DANRE Tetratricopeptide repeat protein 39C OS=Danio rerio |
Align length |
106 |
Score (bit) |
67.4 |
E-value |
2.0e-11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SKG8 |
Definition |
tr|A9SKG8|A9SKG8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
127 |
Score (bit) |
190.0 |
E-value |
3.0e-47 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP913981|Adiantum capillus-veneris mRNA, clone: YMU001_000038_E08. (425 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SKG8|A9SKG8_PHYPA Predicted protein OS=Physcomitrella paten... 190 3e-47 tr|A7SJ47|A7SJ47_NEMVE Predicted protein OS=Nematostella vectens... 70 4e-11 tr|Q4RVG7|Q4RVG7_TETNG Chromosome 15 SCAF14992, whole genome sho... 67 6e-10 tr|A9JRJ7|A9JRJ7_XENTR LOC100135082 protein OS=Xenopus tropicali... 64 4e-09 tr|B3S9Y3|B3S9Y3_TRIAD Putative uncharacterized protein OS=Trich... 57 5e-07 tr|Q582Z1|Q582Z1_9TRYP Putative uncharacterized protein OS=Trypa... 57 6e-07 tr|B6P1C8|B6P1C8_BRAFL Putative uncharacterized protein OS=Branc... 56 8e-07 tr|B6LVL3|B6LVL3_BRAFL Putative uncharacterized protein OS=Branc... 56 8e-07 tr|B3S3R1|B3S3R1_TRIAD Putative uncharacterized protein (Fragmen... 55 1e-06 tr|Q4T976|Q4T976_TETNG Chromosome undetermined SCAF7631, whole g... 55 2e-06 tr|Q4RJG6|Q4RJG6_TETNG Chromosome 18 SCAF15038, whole genome sho... 52 1e-05 tr|A8NKZ4|A8NKZ4_COPC7 Putative uncharacterized protein OS=Copri... 52 1e-05 tr|B0DD63|B0DD63_LACBS Predicted protein OS=Laccaria bicolor (st... 51 3e-05 tr|B0XFL4|B0XFL4_CULQU Putative uncharacterized protein OS=Culex... 50 6e-05 tr|B0WK60|B0WK60_CULQU Putative uncharacterized protein OS=Culex... 50 6e-05 tr|B2RX73|B2RX73_MOUSE Tetratricopeptide repeat domain 39B OS=Mu... 49 9e-05 tr|B7Z3X0|B7Z3X0_HUMAN cDNA FLJ51224 OS=Homo sapiens PE=2 SV=1 49 9e-05 tr|B5DEK2|B5DEK2_RAT RGD1311126 protein OS=Rattus norvegicus GN=... 47 4e-04 tr|B7Z4W9|B7Z4W9_HUMAN cDNA FLJ53630 OS=Homo sapiens PE=2 SV=1 47 4e-04 tr|Q4DAF1|Q4DAF1_TRYCR Putative uncharacterized protein OS=Trypa... 47 6e-04 tr|Q16TQ6|Q16TQ6_AEDAE Putative uncharacterized protein OS=Aedes... 46 8e-04 tr|A4I9W2|A4I9W2_LEIIN Putative uncharacterized protein OS=Leish... 46 0.001 tr|Q4PE89|Q4PE89_USTMA Putative uncharacterized protein OS=Ustil... 46 0.001 tr|Q4DD05|Q4DD05_TRYCR Putative uncharacterized protein OS=Trypa... 45 0.001 tr|A9UVL3|A9UVL3_MONBE Predicted protein OS=Monosiga brevicollis... 45 0.001 tr|A4H7S4|A4H7S4_LEIBR Hypthetical protein, conserved OS=Leishma... 45 0.001 tr|Q4RUE8|Q4RUE8_TETNG Chromosome 1 SCAF14995, whole genome shot... 44 0.003 tr|B4DQ10|B4DQ10_HUMAN cDNA FLJ60322 OS=Homo sapiens PE=2 SV=1 44 0.003 tr|B7Z782|B7Z782_HUMAN cDNA FLJ54565 OS=Homo sapiens PE=2 SV=1 44 0.004 tr|Q5KMB8|Q5KMB8_CRYNE Putative uncharacterized protein OS=Crypt... 44 0.004
>tr|A9SKG8|A9SKG8_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165414 PE=4 SV=1 Length = 601
Score = 190 bits (483), Expect = 3e-47 Identities = 91/127 (71%), Positives = 109/127 (85%) Frame = -3
Query: 423 FLSFYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSYMLQLEWE 244 FLSFYKGRL+RL+ +L GS +SF KL++GL+LT +SKFFKLRHAWVYELG+S+MLQLEW+ Sbjct: 280 FLSFYKGRLERLQRNLTGSYESFQKLEKGLNLTTDSKFFKLRHAWVYELGLSHMLQLEWQ 339
Query: 243 DARKCWEELEKDSVWSRAFFAYMHGVCLSMQGSAKEAAEKFGKVHGLMRE*MSG*VLAEE 64 A K WEELE+DSVWS+AFFAY+HGVCL+M G K AA +FGKVHGLMR +SG VLAEE Sbjct: 340 AAEKFWEELEQDSVWSKAFFAYLHGVCLAMSGEPKAAALRFGKVHGLMRGTISGRVLAEE 399
Query: 63 QYVSRKV 43 QY RK+ Sbjct: 400 QYALRKM 406
>tr|A7SJ47|A7SJ47_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g120193 PE=4 SV=1 Length = 536
Score = 70.5 bits (171), Expect = 4e-11 Identities = 39/107 (36%), Positives = 62/107 (57%) Frame = -3
Query: 414 FYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSYMLQLEWEDAR 235 F+KG + RLKGD ++Q F E + A+ K L YE+G ++LQLEWE A Sbjct: 263 FFKGLVSRLKGDARLALQEF---HEAMLAAADQKEIAL--ICQYEIGWCHLLQLEWEYAL 317
Query: 234 KCWEELEKDSVWSRAFFAYMHGVCLSMQGSAKEAAEKFGKVHGLMRE 94 + L++DS WS+ ++AY+ GV + + GS EA +F + L+++ Sbjct: 318 PAFFRLKEDSKWSQGYYAYLCGVTIGLLGSTTEAQTQFKSISKLVKK 364
>tr|Q4RVG7|Q4RVG7_TETNG Chromosome 15 SCAF14992, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00028342001 PE=4 SV=1 Length = 656
Score = 66.6 bits (161), Expect = 6e-10 Identities = 33/106 (31%), Positives = 63/106 (59%) Frame = -3
Query: 414 FYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSYMLQLEWEDAR 235 F+KGR+QRL+ + ++ SF + L+L ++ + +++H +YE+G M+ L++ +A Sbjct: 384 FFKGRVQRLECQISSALTSF---HDALNLASDQR--EIQHVCLYEIGWCSMIALDYREAF 438
Query: 234 KCWEELEKDSVWSRAFFAYMHGVCLSMQGSAKEAAEKFGKVHGLMR 97 + +E L ++S WS+ ++AY+ GVC G + A F V L + Sbjct: 439 RAFERLRRESRWSQCYYAYLTGVCQGATGDLQGAVSVFKDVLQLFK 484
>tr|A9JRJ7|A9JRJ7_XENTR LOC100135082 protein OS=Xenopus tropicalis GN=LOC100135082 PE=2 SV=1 Length = 570
Score = 63.9 bits (154), Expect = 4e-09 Identities = 32/106 (30%), Positives = 60/106 (56%) Frame = -3
Query: 414 FYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSYMLQLEWEDAR 235 F+KGR+QRL+ + ++ SF L L + + +++H +YE+G M+++ ++DA Sbjct: 306 FFKGRIQRLECQINSALTSF---HTALELATDQR--EIQHVCLYEIGWCSMIEMNYKDAF 360
Query: 234 KCWEELEKDSVWSRAFFAYMHGVCLSMQGSAKEAAEKFGKVHGLMR 97 + +E L+ +S WS+ ++AY+ VC G A + F V L + Sbjct: 361 QSFERLKNESRWSQCYYAYLTAVCQGATGDVDGAHDVFKDVQKLFK 406
>tr|B3S9Y3|B3S9Y3_TRIAD Putative uncharacterized protein OS=Trichoplax adhaerens GN=TRIADDRAFT_38365 PE=4 SV=1 Length = 524
Score = 57.0 bits (136), Expect = 5e-07 Identities = 35/127 (27%), Positives = 68/127 (53%) Frame = -3
Query: 414 FYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSYMLQLEWEDAR 235 F++GR++R++ D+ GS+ +F + + + E ++ YE G +M+ + W A Sbjct: 265 FFQGRVRRIQKDILGSLDAF---NTAVQVAKEQT--AIQQLCCYERGWCHMINMNWPSAV 319
Query: 234 KCWEELEKDSVWSRAFFAYMHGVCLSMQGSAKEAAEKFGKVHGLMRE*MSG*VLAEEQYV 55 + L+K+S WS++++ Y+ + L GS K+A+E+ V L R+ + A E +V Sbjct: 320 PEFVLLKKESRWSQSYYTYLAAITLGASGSMKQASEQMKLVPQLARKRGN----APELFV 375
Query: 54 SRKVKDH 34 RK + Sbjct: 376 IRKANQY 382
>tr|Q582Z1|Q582Z1_9TRYP Putative uncharacterized protein OS=Trypanosoma brucei GN=Tb04.4J6.350 PE=4 SV=1 Length = 672
Score = 56.6 bits (135), Expect = 6e-07 Identities = 29/98 (29%), Positives = 55/98 (56%), Gaps = 2/98 (2%) Frame = -3
Query: 405 GRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFF-KLRHAWVYELGVSYMLQLEWEDARKC 229 GR++RL+ D+EGS+ + K + +K+ +LR +Y+ G ++++ ++W +A + Sbjct: 324 GRIKRLEQDVEGSMSALSKCLKAAEEGQVAKWMPQLRDFAIYDQGWNFVITMQWREAIEL 383
Query: 228 WEELEKDSVWSRAFFAYMHGVCLSMQG-SAKEAAEKFG 118 ++ LE S WS+ F+ Y C M A++A K G Sbjct: 384 YKRLEDHSAWSKLFYGYAQACCFDMLALEAEQAGNKEG 421
>tr|B6P1C8|B6P1C8_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_129764 PE=4 SV=1 Length = 637
Score = 56.2 bits (134), Expect = 8e-07 Identities = 31/101 (30%), Positives = 57/101 (56%) Frame = -3
Query: 414 FYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSYMLQLEWEDAR 235 F+KGRL RL+ E S+ + ++ L + + +L VYE+ S +L+L + +A Sbjct: 369 FFKGRLLRLRCQNEESLAVY---NQALEACKDQREIQL--LCVYEISWSQLLKLNFAEAL 423
Query: 234 KCWEELEKDSVWSRAFFAYMHGVCLSMQGSAKEAAEKFGKV 112 ++ L+++S WS+ ++AY+ +C QG EA + F +V Sbjct: 424 SGFQRLKEESRWSQCYYAYLSAICYGAQGKIPEARDMFKQV 464
>tr|B6LVL3|B6LVL3_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_114239 PE=4 SV=1 Length = 561
Score = 56.2 bits (134), Expect = 8e-07 Identities = 31/101 (30%), Positives = 57/101 (56%) Frame = -3
Query: 414 FYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSYMLQLEWEDAR 235 F+KGRL RL+ E S+ + ++ L + + +L VYE+ S +L+L + +A Sbjct: 293 FFKGRLLRLRCQNEESLAVY---NQALEACKDQREIQL--LCVYEISWSQLLKLNFAEAL 347
Query: 234 KCWEELEKDSVWSRAFFAYMHGVCLSMQGSAKEAAEKFGKV 112 ++ L+++S WS+ ++AY+ +C QG EA + F +V Sbjct: 348 SGFQRLKEESRWSQCYYAYLSAICYGAQGKIPEARDMFKQV 388
>tr|B3S3R1|B3S3R1_TRIAD Putative uncharacterized protein (Fragment) OS=Trichoplax adhaerens GN=TRIADDRAFT_28582 PE=4 SV=1 Length = 544
Score = 55.5 bits (132), Expect = 1e-06 Identities = 38/132 (28%), Positives = 67/132 (50%), Gaps = 2/132 (1%) Frame = -3
Query: 414 FYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSYMLQLEWEDAR 235 ++ GRL +KGD++ +I F + ++ ++ +L H +EL + EW +A Sbjct: 261 YFAGRLHLVKGDIDKAIAYFHD-----SINSQDQWKQLHHVCYWELFWCSCFRFEWREAA 315
Query: 234 KCWEELEKDSVWSRAFFAYMHGVCLSM--QGSAKEAAEKFGKVHGLMRE*MSG*VLAEEQ 61 E L +S WS+A + Y CLSM + +E E F KV L ++ ++G + E+ Sbjct: 316 NYAEILYNESRWSKAMYMYQKAACLSMIPEVPDEETRELFLKVPSL-KQRIAGKSVPVEK 374
Query: 60 YVSRKVKDHALD 25 +V RK + + D Sbjct: 375 FVIRKSRKYVND 386
>tr|Q4T976|Q4T976_TETNG Chromosome undetermined SCAF7631, whole genome shotgun sequence OS=Tetraodon nigroviridis GN=GSTENG00004885001 PE=4 SV=1 Length = 605
Score = 54.7 bits (130), Expect = 2e-06 Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 31/137 (22%) Frame = -3
Query: 414 FYKGRLQRLKGDLEGSIQSFLKLDEGLHLTAESKFFKLRHAWVYELGVSY---------- 265 F+KGR+QRL+ + ++ SF + L L ++ + +L+H +YE+G+ Sbjct: 310 FFKGRVQRLECHINSALASF---HDALELASDQR--ELQHVCLYEIGMFVRSDVTQRRLL 364
Query: 264 ---------------------MLQLEWEDARKCWEELEKDSVWSRAFFAYMHGVCLSMQG 148 M++L +EDA + ++ L+ +S WS+ ++AY+ GVC G Sbjct: 365 CRFSEGVSLLCLRVFLLGWCSMIELNFEDAYRSFKRLKDESRWSQCYYAYLTGVCQGASG 424
Query: 147 SAKEAAEKFGKVHGLMR 97 A+ F V L + Sbjct: 425 DLNGASRVFKDVQKLFK 441
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