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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP913989
Clone id YMU001_000038_F04
Library
Length 515
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GTATTTATTTCAACCCGTCTCCACTAGTCATATCAAGTCATGACAATGCTACAGCATTAC
CTACTCATAGCCAAAAGTGCAATGTTTCAGCATGACTAAAACCAGATGGTTGGAAAAATC
CTTATGCCAATAATTACAGCTTCAATCTTTGAGACTCTTTTGAGCTCCCCCAATGTTTTT
GGAAGACCTTGCAACTTTTTTGATCAGTCATGGGTAAGAGGGTGGTTATCTCTAATCATT
GCAAAATTGACTTGCTCGAGGTTATCACAAACACAAAGTTTGTTGGTCTTCTTAGGCACC
ACAACAATAGGAGACAGTCACTCTGTAAGTTCTGTTTCACAAATGAATTTTGTCTCTAGC
AATTAAATGATTTTATCTTTGATTTTCTCAAGGAATTGTCATTGGTCGTTGTTTCTATGG
CTACGGTTGAGTGCATTTGGCTTAGATGCCTTATGGCTGACTTGGGTGTAGGATAGTAGT
CTGCCACCACTATCTTTATTGAGAGTCAGAGTGCT
■■Homology search results ■■ -
sp_hit_id A6ZJ55
Definition sp|A6ZJ55|YRT7_CAEEL Uncharacterized protein T07A5.7 OS=Caenorhabditis elegans
Align length 47
Score (bit) 32.3
E-value 1.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913989|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_F04.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A6ZJ55|YRT7_CAEEL Uncharacterized protein T07A5.7 OS=Caenorha...    32   1.3  
sp|Q9ES38|S27A5_RAT Bile acyl-CoA synthetase OS=Rattus norvegicu...    31   3.9  
sp|Q4IFH8|HIR3_GIBZE Histone transcription regulator 3 homolog O...    31   3.9  
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa...    30   8.7  
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa...    30   8.7  
sp|P49600|SP2E_BACME Stage II sporulation protein E (Fragment) O...    30   8.7  

>sp|A6ZJ55|YRT7_CAEEL Uncharacterized protein T07A5.7
           OS=Caenorhabditis elegans GN=T07A5.7 PE=4 SV=1
          Length = 452

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -2

Query: 466 PKSAIRHLSQMHSTVAIETTTNDNSLRKSKIKSFNC*RQNSFVKQNL 326
           P S + HL Q H    I T TND +L+KSKI ++   +  +    N+
Sbjct: 322 PFSFLNHLYQKHRQAYI-TATNDKALKKSKINTYGSRKSRALHSMNI 367


>sp|Q9ES38|S27A5_RAT Bile acyl-CoA synthetase OS=Rattus norvegicus
           GN=Slc27a5 PE=1 SV=1
          Length = 690

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 8/60 (13%)
 Frame = +1

Query: 109 VGKILMPIITASIFETLLSSPNVF--------GRPCNFFDQSWVRGWLSLIIAKLTCSRL 264
           +G+ L P  TA      L  P  F        GRP   +  SW+  WLSL  A LT S L
Sbjct: 20  LGQPLWPAATALALRWFLGDPTCFVLLGLAFLGRP---WISSWIPHWLSLAAAALTLSLL 76


>sp|Q4IFH8|HIR3_GIBZE Histone transcription regulator 3 homolog
            OS=Gibberella zeae GN=HIR3 PE=3 SV=1
          Length = 2020

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 21/71 (29%), Positives = 30/71 (42%)
 Frame = +3

Query: 99   KPDGWKNPYANNYSFNL*DSFELPQCFWKTLQLF*SVMGKRVVISNHCKIDLLEVITNTK 278
            KPD WKNPY             L +C+WK  Q     +  + + S   KI L+ +I   K
Sbjct: 1386 KPDNWKNPYM------------LSKCYWKMYQTPDDQLDVKDITS---KIGLMTLIDTLK 1430

Query: 279  FVGLLRHHNNR 311
                + H+  R
Sbjct: 1431 KAVEVAHNARR 1441


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
           OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
          Length = 1498

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 314 SPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           SP+V+VPKK     +C +   +N A I D  PL
Sbjct: 660 SPVVLVPKKDGTFRLCVDYRTLNKATISDPFPL 692


>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
           OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
          Length = 1547

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 314 SPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           SP+V+VPKK     +C +   +N A I D  PL
Sbjct: 634 SPVVLVPKKDGTFRLCVDYRTLNKATISDPFPL 666


>sp|P49600|SP2E_BACME Stage II sporulation protein E (Fragment)
           OS=Bacillus megaterium GN=spoIIE PE=3 SV=1
          Length = 585

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 324 CKFCFTNEFCL*QLNDFIFDFLKELSLVV 410
           C+FCF  E C  Q  D  ++++KE+ L V
Sbjct: 159 CQFCFKKEQCWAQQFDTTYEYMKEIMLEV 187
tr_hit_id A5AKW2
Definition tr|A5AKW2|A5AKW2_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 46
Score (bit) 40.0
E-value 0.068
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP913989|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_F04.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5AKW2|A5AKW2_VITVI Putative uncharacterized protein OS=Vitis...    40   0.068
tr|A5AJF9|A5AJF9_VITVI Putative uncharacterized protein OS=Vitis...    40   0.089
tr|A5BQ24|A5BQ24_VITVI Putative uncharacterized protein OS=Vitis...    39   0.12 
tr|A5BEB6|A5BEB6_VITVI Putative uncharacterized protein OS=Vitis...    39   0.15 
tr|A5BV39|A5BV39_VITVI Putative uncharacterized protein OS=Vitis...    37   0.44 
tr|A5BDV3|A5BDV3_VITVI Putative uncharacterized protein (Fragmen...    37   0.58 
tr|A5BDR8|A5BDR8_VITVI Putative uncharacterized protein OS=Vitis...    37   0.58 
tr|A8N859|A8N859_COPC7 Predicted protein OS=Coprinopsis cinerea ...    37   0.58 
tr|A5B6V1|A5B6V1_VITVI Putative uncharacterized protein OS=Vitis...    37   0.75 
tr|Q153Y8|Q153Y8_HYDMC Polyprotein (Fragment) OS=Hydrangea macro...    36   0.98 
tr|A5C0C5|A5C0C5_VITVI Putative uncharacterized protein OS=Vitis...    36   0.98 
tr|A5BFW3|A5BFW3_VITVI Putative uncharacterized protein OS=Vitis...    36   0.98 
tr|A5AZJ0|A5AZJ0_VITVI Putative uncharacterized protein OS=Vitis...    36   0.98 
tr|A5AIZ3|A5AIZ3_VITVI Putative uncharacterized protein OS=Vitis...    36   0.98 
tr|A2Q2J0|A2Q2J0_MEDTR RNA-directed DNA polymerase (Reverse tran...    36   0.98 
tr|A5BKB3|A5BKB3_VITVI Putative uncharacterized protein OS=Vitis...    36   1.3  
tr|A5BKA8|A5BKA8_VITVI Putative uncharacterized protein OS=Vitis...    36   1.3  
tr|A5BJI5|A5BJI5_VITVI Putative uncharacterized protein OS=Vitis...    36   1.3  
tr|A5B181|A5B181_VITVI Putative uncharacterized protein OS=Vitis...    36   1.3  
tr|A5AZ94|A5AZ94_VITVI Putative uncharacterized protein OS=Vitis...    36   1.3  
tr|A5AS74|A5AS74_VITVI Putative uncharacterized protein OS=Vitis...    36   1.3  
tr|A5AJ95|A5AJ95_VITVI Putative uncharacterized protein OS=Vitis...    36   1.3  
tr|A5BX56|A5BX56_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5BWP0|A5BWP0_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5BUW5|A5BUW5_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5BU25|A5BU25_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5BSA5|A5BSA5_VITVI Putative uncharacterized protein OS=Vitis...    35   1.7  
tr|A5C098|A5C098_VITVI Putative uncharacterized protein OS=Vitis...    35   2.2  
tr|A5BRS0|A5BRS0_VITVI Putative uncharacterized protein OS=Vitis...    35   2.2  
tr|A5BHY7|A5BHY7_VITVI Putative uncharacterized protein OS=Vitis...    35   2.2  

>tr|A5AKW2|A5AKW2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_028401 PE=4 SV=1
          Length = 742

 Score = 40.0 bits (92), Expect = 0.068
 Identities = 20/46 (43%), Positives = 29/46 (63%)
 Frame = -1

Query: 347 FICETELTE*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTH 210
           FI   E  E L+ +V+VPKK  K+ VC +L  +N A  +D+ PL+H
Sbjct: 49  FISVVEYLEWLANVVLVPKKDGKVRVCVDLRDLNKASPKDDFPLSH 94


>tr|A5AJF9|A5AJF9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_038551 PE=4 SV=1
          Length = 1438

 Score = 39.7 bits (91), Expect = 0.089
 Identities = 21/46 (45%), Positives = 27/46 (58%)
 Frame = -1

Query: 347 FICETELTE*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTH 210
           FI   E  E L+ IV VPK   K+ VC N + +N A  +D+ PLTH
Sbjct: 674 FISMVEYLEWLANIVPVPKNDGKVRVCVNFKDLNKASPKDDFPLTH 719


>tr|A5BQ24|A5BQ24_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_002410 PE=4 SV=1
          Length = 640

 Score = 39.3 bits (90), Expect = 0.12
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = -1

Query: 350 KFICETELTE*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTH 210
           +F+   E  E L+ +V VPKK NK+ VC + + +N    +D+ PL+H
Sbjct: 167 RFLSVVEYPEWLANVVHVPKKDNKVRVCVDFQDINKVSPKDDFPLSH 213


>tr|A5BEB6|A5BEB6_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_025665 PE=4 SV=1
          Length = 685

 Score = 38.9 bits (89), Expect = 0.15
 Identities = 19/45 (42%), Positives = 29/45 (64%)
 Frame = -1

Query: 350 KFICETELTE*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           +FI E + T+ L+ +VVVPKK  K  VC +   +N A ++D+ PL
Sbjct: 48  RFIREVDYTDWLANVVVVPKKEGKWRVCVDYTNLNNACLKDSFPL 92


>tr|A5BV39|A5BV39_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017493 PE=4 SV=1
          Length = 1009

 Score = 37.4 bits (85), Expect = 0.44
 Identities = 19/46 (41%), Positives = 27/46 (58%)
 Frame = -1

Query: 347 FICETELTE*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTH 210
           FI   E  E L+ +V VPKK  K+ VC +   +N A  +D+ PL+H
Sbjct: 700 FISVVEYPEWLANVVPVPKKDGKVRVCVDFRDLNKASPKDDFPLSH 745


>tr|A5BDV3|A5BDV3_VITVI Putative uncharacterized protein (Fragment)
           OS=Vitis vinifera GN=VITISV_027566 PE=4 SV=1
          Length = 880

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 16/41 (39%), Positives = 28/41 (68%)
 Frame = -1

Query: 332 ELTE*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPLTH 210
           E +E L+ +++VPKK NK+ VC +   +N +  +D+ PL+H
Sbjct: 499 EYSEWLANVILVPKKDNKVRVCVDFRDLNKSNPKDDFPLSH 539


>tr|A5BDR8|A5BDR8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034181 PE=4 SV=1
          Length = 921

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -1

Query: 347 FICETELTE*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           FI E E  + L+ +VVVPKK  K  VC N   +N A  +D+ PL
Sbjct: 49  FIKEVEYPDWLANVVVVPKKEGKWRVCVNYTNLNNACPKDSFPL 92


>tr|A8N859|A8N859_COPC7 Predicted protein OS=Coprinopsis cinerea
           (strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_09280 PE=4
           SV=1
          Length = 263

 Score = 37.0 bits (84), Expect = 0.58
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
 Frame = +1

Query: 175 VFGRPCNFFDQSWVRGWLSLIIAKLTCSRLSQTQSLLVFLGTTTIG-----DSHSVSSVS 339
           +FG   N    +W+ GW + ++ KL+  +  Q   L  F+ TTT+G      + +  + S
Sbjct: 158 IFGLVLNLLGTAWLIGWPAYLLVKLSLGKSYQRLILTCFVFTTTLGAWDIWHAINTQNTS 217

Query: 340 QMNFVSSN*MILSLIFSRNCHW 405
              F SS+  +L  +   N  W
Sbjct: 218 PYLFYSSHLELLFSVLVANVGW 239


>tr|A5B6V1|A5B6V1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_042320 PE=4 SV=1
          Length = 829

 Score = 36.6 bits (83), Expect = 0.75
 Identities = 20/44 (45%), Positives = 26/44 (59%)
 Frame = -1

Query: 347 FICETELTE*LSPIVVVPKKTNKLCVCDNLEQVNFAMIRDNHPL 216
           FI E E  + L+ +VVVPKK  K  VC +   +N A  +DN PL
Sbjct: 39  FIREMEYPDWLANVVVVPKKEGKWRVCVDYTNLNNACPKDNFPL 82


>tr|Q153Y8|Q153Y8_HYDMC Polyprotein (Fragment) OS=Hydrangea
           macrophylla PE=4 SV=1
          Length = 351

 Score = 36.2 bits (82), Expect = 0.98
 Identities = 18/32 (56%), Positives = 24/32 (75%)
 Frame = +3

Query: 420 ATVECIWLRCLMADLGVG**SATTIFIESQSA 515
           AT E +WLR L+ DLGV   +ATTI+ ++QSA
Sbjct: 301 ATQELLWLRWLLEDLGVVHSTATTIYCDNQSA 332