BP914003
Clone id YMU001_000038_G06
Library
Length 478
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGGCATTCATGACATTTTGAGTAGTAGGGCGAATGCAATGGTCTTGTCCCTGCAGAAAGC
AGGATGGAGTGAGCCGGATGTAGTAAAAATTCTCAGACTTTGATTGAAACATGCTTGTTA
GCAATGTTCACTAACAATGAAGGCTTCATCTTCAGCTCTATCCAAGCATGCTTGTTAGCA
ATGTTCACTAACAATGAAGGCTTCATCTTCAGCTCTAATATTGGCATATCCATCATCTGG
GCATGCATAATTGCGCTCGATCGTAGCTCTAGCTGATTAATTCTACTGATTCACCTGAAT
TATACCATCTGGTGAGGACCGGTTGGTGGGTGTTCAAAGGATCTCTTCTGGAGGAGGACA
TGTCATACATGTAAATATTCATCTGCTGATGGAAATTCTTTTCAAAGTATGGTGTGTATG
CCTGTATCAACTGCATATATTTTATCTAGCGCTTTTTGTTCAAAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id Q6F0G9
Definition sp|Q6F0G9|PYRG_MESFL CTP synthase OS=Mesoplasma florum
Align length 44
Score (bit) 30.8
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914003|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_G06.
(461 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6F0G9|PYRG_MESFL CTP synthase OS=Mesoplasma florum GN=pyrG P... 31 2.9
sp|Q6FT96|MDV1_CANGA Mitochondrial division protein 1 OS=Candida... 30 5.0
sp|Q6DJ95|SYCM_XENTR Probable cysteinyl-tRNA synthetase, mitocho... 30 6.5
sp|P54249|ACHA_ERICO Acetylcholine receptor subunit alpha (Fragm... 30 6.5

>sp|Q6F0G9|PYRG_MESFL CTP synthase OS=Mesoplasma florum GN=pyrG PE=3
SV=1
Length = 532

Score = 30.8 bits (68), Expect = 2.9
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = -1

Query: 239 QMMDMPILELKMKPSLLVNIANKHAWIELKMKPSLLVNIANKHV 108
QM +L L ++P ++V +KH+ E+K K SL NI +V
Sbjct: 193 QMSVKELLSLGIQPDIIVQRTDKHSSKEIKEKISLFCNIPTSNV 236


>sp|Q6FT96|MDV1_CANGA Mitochondrial division protein 1 OS=Candida
glabrata GN=MDV1 PE=3 SV=1
Length = 711

Score = 30.0 bits (66), Expect = 5.0
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -2

Query: 400 KNFHQQMNIYMYDMSSSRRDPLNTHQPVLTRWYNSGESVELIS*SYDRAQLCM 242
K+ H +N + D S+ + QP + ++YNSG+ + I ++D A C+
Sbjct: 361 KDNHNALNGFFEDASNKKS---RKAQPTVQKYYNSGKKLSTIPKAHDDAITCL 410


>sp|Q6DJ95|SYCM_XENTR Probable cysteinyl-tRNA synthetase,
mitochondrial OS=Xenopus tropicalis GN=cars2 PE=2 SV=1
Length = 572

Score = 29.6 bits (65), Expect = 6.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = -2

Query: 376 IYMYDMSSSRRDPLNTHQPVLTRWYNSGESVELIS*SYDRAQL 248
I +Y+ + R+DPL P + WY+ G +V YD A L
Sbjct: 55 IKVYNSLTRRKDPLILADPTVATWYSCGPTV------YDHAHL 91


>sp|P54249|ACHA_ERICO Acetylcholine receptor subunit alpha
(Fragment) OS=Erinaceus concolor GN=CHRNA1 PE=3 SV=1
Length = 84

Score = 29.6 bits (65), Expect = 6.5
Identities = 17/52 (32%), Positives = 28/52 (53%)
Frame = -2

Query: 439 YMQLIQAYTPYFEKNFHQQMNIYMYDMSSSRRDPLNTHQPVLTRWYNSGESV 284
Y ++I + P+ E+N ++ + YD S +P N QP L+ + SGE V
Sbjct: 6 YCEIIVTHFPFDEQNCSMKLGTWTYDGSVVAINPEN-DQPDLSNFMESGEWV 56


tr_hit_id B2HA54
Definition tr|B2HA54|B2HA54_BURPS Acetyltransferase, GNAT family OS=Burkholderia pseudomallei 1655
Align length 57
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914003|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_G06.
(461 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B2HA54|B2HA54_BURPS Acetyltransferase, GNAT family OS=Burkhol... 33 9.2

>tr|B2HA54|B2HA54_BURPS Acetyltransferase, GNAT family
OS=Burkholderia pseudomallei 1655 GN=BURPS1655_H0051
PE=4 SV=1
Length = 225

Score = 32.7 bits (73), Expect = 9.2
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = -3

Query: 240 PDDGYANIRAEDEAFIVSEHC*QACLDRAEDEAFIVSEHC*QACFNQSLRIFTTSGS 70
PD+ YA + A + F+V ++C +D A+ +A+ + + Q C LR+ S
Sbjct: 90 PDEIYAILSARSDVFVVEQNCVYRDIDHADFDAWHLGAYDAQGCLACYLRVLLPDAS 146