BP914005
Clone id YMU001_000038_G08
Library
Length 416
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
ACTTCCTTCCTGCCTTCTTCAGTACTAGATGAAATGAGCCTTTGGGATGCATCTACATCA
CGCAGCATATGAATATCTGTAGAGCTAGCCTCCTTTTCACAAGAATACTTGTGTGAGGCT
AGACTTGCCTCTGCCTGAGACACATTCAGCTTTTCCACACCTCCAATTTCTCTACCTGCT
AACCCTATGGAGCAAAATAATACTCCTTGCTTTTGTGACTGCAAAATAGGCACTCCTCTT
GAAAATTCGTACCCTTTTTCTGTCACATGATGCATCAGCACAGCTTGCACTGTCCCAGCC
CACAATGCCAGTTTTCTCGCCTGATGCACCAAGGGGTTCGCACAAGACTCTGAACTCCTC
AACTTCTGTGGAGTGGACAGAGTCAAAAGCTCTGTCTGCACATTTGAAACCGATCT
■■Homology search results ■■ -
sp_hit_id Q6L2M4
Definition sp|Q6L2M4|PPNK_PICTO Probable inorganic polyphosphate/ATP-NAD kinase OS=Picrophilus torridus
Align length 83
Score (bit) 32.0
E-value 0.99
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914005|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_G08.
(416 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6L2M4|PPNK_PICTO Probable inorganic polyphosphate/ATP-NAD ki... 32 0.99
sp|Q5TYW4|NAG_DANRE Neuroblastoma-amplified gene protein homolog... 30 3.8
sp|Q6DBY0|NUP85_DANRE Nucleoporin NUP85 OS=Danio rerio GN=nup85 ... 30 4.9
sp|Q0I1B8|MUTS_HAES1 DNA mismatch repair protein mutS OS=Haemoph... 30 4.9
sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Hom... 29 6.4
sp|B0UWV7|MUTS_HAES2 DNA mismatch repair protein mutS OS=Haemoph... 29 6.4
sp|Q7G193|ALDO1_ARATH Aldehyde oxidase 1 OS=Arabidopsis thaliana... 29 8.4

>sp|Q6L2M4|PPNK_PICTO Probable inorganic polyphosphate/ATP-NAD
kinase OS=Picrophilus torridus GN=ppnK PE=3 SV=1
Length = 270

Score = 32.0 bits (71), Expect = 0.99
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
Frame = -1

Query: 251 YEFSRGVPILQSQKQGVL---FCSIGLAGREIGGVEKLNVSQA---EASLASHKYSCEKE 90
Y FS G PIL G++ +G R I EK ++ A E SL + EK+
Sbjct: 172 YSFSAGGPILMPNLNGIVVSYIAPVGFRSRSIVFSEKTDLKIAIVGERSLLTIDGQIEKK 231

Query: 89 ASSTDIHMLRDVDASQRLISSST 21
S D+ +R + R IS T
Sbjct: 232 LSKNDVVNIRVSENGARFISMYT 254


>sp|Q5TYW4|NAG_DANRE Neuroblastoma-amplified gene protein homolog
OS=Danio rerio GN=nag PE=2 SV=1
Length = 2372

Score = 30.0 bits (66), Expect = 3.8
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = -1

Query: 194 CSIGLA--GRE--IGGVEKLNVSQAEASLASHKYSCEKEASSTDIHMLRDVDASQRLISS 27
CS+ L G+E I G+E+L ++ SC+ + ++ LRD+D + L+ +
Sbjct: 851 CSLSLVRLGKEQNIPGLERLCDDLVTMETLVYETSCDLSVTLKELQQLRDIDKLRLLMKN 910

Query: 26 STEE 15
S+E+
Sbjct: 911 SSED 914


>sp|Q6DBY0|NUP85_DANRE Nucleoporin NUP85 OS=Danio rerio GN=nup85
PE=2 SV=1
Length = 649

Score = 29.6 bits (65), Expect = 4.9
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1

Query: 392 ELLTLSTPQKLRSSESCANPLVHQARK 312
+LL T KLR S S +PLVH RK
Sbjct: 31 DLLVYETNYKLRGSSSAGSPLVHVVRK 57


>sp|Q0I1B8|MUTS_HAES1 DNA mismatch repair protein mutS OS=Haemophilus
somnus (strain 129Pt) GN=mutS PE=3 SV=1
Length = 856

Score = 29.6 bits (65), Expect = 4.9
Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 13/115 (11%)
Frame = -1

Query: 377 STPQKLRSSESCANPLVHQARKLALWAGTVQAVLM--------HHVTEKGYEFSRGVPIL 222
ST L + +CA L + R L L+A + + H+V E + + +
Sbjct: 697 STYDGLSLAWACAEQLAQKIRSLTLFATHYFELTVLPEKIDGIHNVHLDAIEHNDNIAFM 756

Query: 221 QSQKQGVLFCSIGLAGREIGGVEKLNVSQAEASL-----ASHKYSCEKEASSTDI 72
S ++G S GLA + GV + + A+ L S + SC+ ++ T +
Sbjct: 757 HSIQEGAASKSYGLAVAALAGVPQNVIKSAKQKLKQLETLSQQNSCQSQSVLTQV 811


>sp|P35658|NU214_HUMAN Nuclear pore complex protein Nup214 OS=Homo
sapiens GN=NUP214 PE=1 SV=2
Length = 2090

Score = 29.3 bits (64), Expect = 6.4
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +1

Query: 31 EMSLWDASTSRSI*ISVELASFSQEYLCEARLASA*DTFSFSTPPISLPANPMEQNNTPC 210
+ SLW S++ S+ E LC A L + ++ + S P + +PM+Q
Sbjct: 890 QTSLWSLSSAVPSQSSIHSFDSDLESLCNALLKTTIESHTKSLPKVPAKLSPMKQAQLRN 949

Query: 211 FCDCKIGTPLENSYPFSVT 267
F + P+ ++ P S++
Sbjct: 950 FLAKRKTPPVRSTAPASLS 968


>sp|B0UWV7|MUTS_HAES2 DNA mismatch repair protein mutS
OS=Haemophilus somnus (strain 2336) GN=mutS PE=3 SV=1
Length = 859

Score = 29.3 bits (64), Expect = 6.4
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Frame = -1

Query: 377 STPQKLRSSESCANPLVHQARKLALWA-------GTVQAVL-MHHVTEKGYEFSRGVPIL 222
ST L + +CA L + R L L+A G + + +H+V +E + + +
Sbjct: 700 STYDGLSLAWACAEQLAQKIRSLTLFATHYFELTGLPEKIEGIHNVHLDAFEHNDSIAFM 759

Query: 221 QSQKQGVLFCSIGLAGREIGGVEKLNVSQAEASL 120
S ++G S GLA + GV + + A+ L
Sbjct: 760 HSVQEGAASKSYGLAVAALAGVPQNVIKSAKQKL 793


>sp|Q7G193|ALDO1_ARATH Aldehyde oxidase 1 OS=Arabidopsis thaliana
GN=AAO1 PE=1 SV=2
Length = 1368

Score = 28.9 bits (63), Expect = 8.4
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +1

Query: 271 CISTACTVPAHNASFLA*CTKGFAQDSELLNFCGVDRVKSSVCTF 405
C S A V + F A C KG +D L D S VCTF
Sbjct: 188 CKSFAADVDIEDLGFNAFCKKGENRDEVLRRLPCYDHTSSHVCTF 232


tr_hit_id Q67LW1
Definition tr|Q67LW1|Q67LW1_SYMTH Putative uncharacterized protein OS=Symbiobacterium thermophilum
Align length 85
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914005|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_G08.
(416 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q67LW1|Q67LW1_SYMTH Putative uncharacterized protein OS=Symbi... 35 1.4
tr|A2R9K9|A2R9K9_ASPNC Similarity to protease type 2 Iga1 -Haemo... 34 4.1
tr|Q47GM8|Q47GM8_DECAR N-acetylneuraminate synthase OS=Dechlorom... 33 5.4
tr|Q92FF3|Q92FF3_LISIN Lin0153 protein OS=Listeria innocua GN=li... 33 7.1
tr|Q189U9|Q189U9_CLOD6 Putative cysteine desulfurase OS=Clostrid... 33 7.1
tr|Q0ATP4|Q0ATP4_MARMM Putative uncharacterized protein OS=Maric... 33 7.1
tr|A0AES9|A0AES9_LISW6 Complete genome OS=Listeria welshimeri se... 33 7.1
tr|Q6FKR9|Q6FKR9_CANGA Similar to uniprot|P43590 Saccharomyces c... 33 7.1
tr|Q2N7U7|Q2N7U7_ERYLH Alpha-methylacyl-CoA racemase OS=Erythrob... 33 9.2
tr|Q872D3|Q872D3_NEUCR Putative uncharacterized protein 80A10.43... 33 9.2

>tr|Q67LW1|Q67LW1_SYMTH Putative uncharacterized protein
OS=Symbiobacterium thermophilum GN=STH2350 PE=4 SV=1
Length = 232

Score = 35.4 bits (80), Expect = 1.4
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = -1

Query: 260 EKGYE--FSRGVPILQSQK-QGVLFCSIGLAGREIGGVEKLNVSQAEASLASHKYSCEKE 90
+ GY + P+LQ GV+F GLAG+++G +E L A AS E +
Sbjct: 64 DDGYRSNYLHAYPVLQQHGFSGVIFMVTGLAGQKVGRLEYLTWEDMHAMTASG--VIEIQ 121

Query: 89 ASSTDIHMLRDVDASQRLISSSTEE 15
A S D H R++D L+ S EE
Sbjct: 122 AHSHDGH--RNIDGQPALVHWSEEE 144


>tr|A2R9K9|A2R9K9_ASPNC Similarity to protease type 2 Iga1
-Haemophilus influenzae OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=An17g01805 PE=3 SV=1
Length = 843

Score = 33.9 bits (76), Expect = 4.1
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Frame = +2

Query: 272 ASAQLALSQPTMPVFS-PDAPRGSHKTLNSSTSVEWT-----ESKALSAHLKP 412
ASAQLA +QP PV + P+ PR HK + +VE T +S L AH+ P
Sbjct: 132 ASAQLATAQPETPVMAVPETPR--HKRVKRGPTVEETPRTTRQSARLRAHVHP 182


>tr|Q47GM8|Q47GM8_DECAR N-acetylneuraminate synthase
OS=Dechloromonas aromatica (strain RCB) GN=Daro_1248
PE=4 SV=1
Length = 348

Score = 33.5 bits (75), Expect = 5.4
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = -3

Query: 399 ADRAFDSVHSTEVEEFRVLCEPLGASGEKTGIVGWDSASCADASCDRKRVRIFKRSAYF 223
AD+ DS S E +E R LC+ + G +G++ +AS ++F+RS YF
Sbjct: 242 ADKGPDSEFSLEPDELRRLCQDARDAWSALGSLGFERQQAEEAS------KVFRRSVYF 294


>tr|Q92FF3|Q92FF3_LISIN Lin0153 protein OS=Listeria innocua
GN=lin0153 PE=3 SV=1
Length = 756

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -1

Query: 119 ASHKYSCEKEASSTDIHMLRDVDASQRLISSSTEEGRK 6
AS+ + + ASS D++ + +D +QR++ SS E G++
Sbjct: 563 ASYTFRLKSSASSVDVNNISKIDLTQRMVKSSVEFGKQ 600


>tr|Q189U9|Q189U9_CLOD6 Putative cysteine desulfurase OS=Clostridium
difficile (strain 630) GN=iscS1 PE=3 SV=1
Length = 383

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1

Query: 296 GTVQAVLMHHVTEKGYEFSRGVPILQSQKQGVLFCSIGLAGREIGGVEKLNVS 138
GT VL+H++ +KG S G +K + +IGL EI G + ++S
Sbjct: 302 GTKGEVLLHYLEQKGIYVSTGSACSSKKKGSYVLNAIGLTNEEINGTIRFSLS 354


>tr|Q0ATP4|Q0ATP4_MARMM Putative uncharacterized protein
OS=Maricaulis maris (strain MCS10) GN=Mmar10_0047 PE=3
SV=1
Length = 232

Score = 33.1 bits (74), Expect = 7.1
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2

Query: 272 ASAQLALSQPTMPVFSPDAPRGSHKTLNSSTSVEWTES 385
A+A LAL+ P P+F P AP G+ +TL S+E ++
Sbjct: 15 AAAPLALASP--PIFQPGAPGGAARTLTPEQSIEMAQT 50


>tr|A0AES9|A0AES9_LISW6 Complete genome OS=Listeria welshimeri
serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334)
GN=lwe0093 PE=4 SV=1
Length = 760

Score = 33.1 bits (74), Expect = 7.1
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -1

Query: 119 ASHKYSCEKEASSTDIHMLRDVDASQRLISSSTEEGRK 6
AS+ + + ASS D++ + +D +QR++ SS E G++
Sbjct: 567 ASYTFRLKSSASSVDVNNISKIDLTQRMVKSSVEFGKQ 604


>tr|Q6FKR9|Q6FKR9_CANGA Similar to uniprot|P43590 Saccharomyces
cerevisiae YFR006w OS=Candida glabrata GN=CAGL0L09185g
PE=4 SV=1
Length = 490

Score = 33.1 bits (74), Expect = 7.1
Identities = 17/52 (32%), Positives = 34/52 (65%)
Frame = -3

Query: 378 VHSTEVEEFRVLCEPLGASGEKTGIVGWDSASCADASCDRKRVRIFKRSAYF 223
+H+T+V+E + + LG SG++TG++ + + + ++ CD VR F++ YF
Sbjct: 42 LHATKVKELFLERKNLGGSGKRTGLLLFGNKAESNKYCD--TVRKFRQERYF 91


>tr|Q2N7U7|Q2N7U7_ERYLH Alpha-methylacyl-CoA racemase
OS=Erythrobacter litoralis (strain HTCC2594)
GN=ELI_10760 PE=4 SV=1
Length = 228

Score = 32.7 bits (73), Expect = 9.2
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = -3

Query: 408 FKCADRAFDSVHSTEVEEFRVLCEPLGASGEKTGIVGWD 292
++CAD F SV S E + + +LC+ LG +G+ + G+D
Sbjct: 79 YRCADGNFISVGSLEPKFYALLCKKLGLAGDSSFDDGYD 117


>tr|Q872D3|Q872D3_NEUCR Putative uncharacterized protein 80A10.430
(Predicted protein) OS=Neurospora crassa GN=80A10.430
PE=4 SV=1
Length = 135

Score = 32.7 bits (73), Expect = 9.2
Identities = 18/56 (32%), Positives = 26/56 (46%)
Frame = -1

Query: 176 GREIGGVEKLNVSQAEASLASHKYSCEKEASSTDIHMLRDVDASQRLISSSTEEGR 9
G+EIGG VSQA+ + +S K E A T L+ +D R + E +
Sbjct: 67 GKEIGGKIDEAVSQADKTYSSTKSQAEALAKDTKAEALKKIDQFDRTVEQKAAEAK 122