BP914007 [AcEST]

BP914007
Clone id	YMU001_000038_G10
Library	YMU01
Length	543
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000038_G10.
Accession	BP914007
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GAGACGTTTCAACGAATTGAATAAAAACATTGAGGAAGCAGTAATCATCATGGCTTTACG TACCATGGCATCACGATATTCACCATGGTATTAGAGACGCTCAGAAAAATTTTGAAATAG AAATCACCATCATGGCTTTACATACCATGGCATCAGAGACGCTTTCTTCAAATCAAATAA AAATTGTAAAATAGTAATCACCATCATGGATTTATGTACCATGGCATCAGAGACGCTAAT TTTGTGCAAAATCTGCCAAATCTGAAGACAATGACTAGTCGGTAGATAATGGCTTGGTAA AAGCTCCAACAATCTCTACATTGATGACTCTAATGAAAACCATCAGCATGTTAGTATACC ATTATGAAATGATCATCAAATTACGTGAAGTATATTTATGACAAATCAATCCTGACGAGA GAAATAGCATTCATCAAGAACCAAAGCCATGATTTGCATGAAATGGTGTGACCCTGCTAT GATTGAGGTAGAAACAAATTACATGCCCAATCTATTGATCAAAGCTTGTTCAAAGGTGTG TAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9H159
Definition	sp\|Q9H159\|CAD19_HUMAN Cadherin-19 OS=Homo sapiens
Align length	56
Score (bit)	32.0
E-value	2.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP914007\|Adiantum capillus-veneris mRNA, clone: YMU001_000038_G10. (543 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9H159\|CAD19_HUMAN Cadherin-19 OS=Homo sapiens GN=CDH19 PE=2 ... 32 2.0 >sp\|Q9H159\|CAD19_HUMAN Cadherin-19 OS=Homo sapiens GN=CDH19 PE=2 SV=1 Length = 772 Score = 32.0 bits (71), Expect = 2.0 Identities = 18/56 (32%), Positives = 27/56 (48%) Frame = +3 Query: 60 VPWHHDIHHGIRDAQKNFEIEITIMALHTMASETLSSNQIKIVK**SPSWIYVPWH 227 V + H H+GIR KN + +M HT AS T Q++ V P +P++ Sbjct: 322 VDFEHQNHYGIRAKVKNHHVPEQLMKYHTEASTTFIKIQVEDVD--EPPLFLLPYY 375
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP914007\|Adiantum capillus-veneris mRNA, clone: YMU001_000038_G10. (543 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****