BP914009
Clone id YMU001_000038_G12
Library
Length 487
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000038_G12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTCTCTCTTAAGGAACCCTGTCAAGCTCAAGTATGCCTTACTCTGTCTGCACACGGAATG
GCCGTCAAGTCCTTTACCTCAAGTTCTGTTAGCAGAACCAACTCAAAAAAATGTGAAGAT
ACTTCATCAATTGTCCAAAGAAGTCAGTTGGAAGCCAGCCATGTAATCTTATTGAATGCA
TAGCCAAAAACTCTTCTAACTTAGCATAATCTAGAAAACAAAACCTTGCATCATGCAGCC
TGCTACATCACGCATCTGGTACCCTCTGCATCTGCAACTTGCACTTTAGTAACCCCCAGG
ATCAAATGGGATAATAAGGAATTGTCCACACACTGACGCATCATAATATCCACATGAGCA
TACATTTCCTGTATCAATCAACATCCAGCATTTTTGGTGCAAATATGCTATCCCTGCTTC
AAATAGCACGCAATTACTATGCATACATAACAGTATCCATCCATATTGAATCTACTTACG
AACATCC
■■Homology search results ■■ -
sp_hit_id Q9CZS3
Definition sp|Q9CZS3|CP063_MOUSE LisH domain-containing protein C16orf63 homolog OS=Mus musculus
Align length 49
Score (bit) 30.0
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914009|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_G12.
(487 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9CZS3|CP063_MOUSE LisH domain-containing protein C16orf63 ho... 30 5.8
sp|P29182|TXW8_NAJNA Weak neurotoxin 8 OS=Naja naja PE=1 SV=1 30 7.5
sp|Q3B6K8|FABH_PELLD 3-oxoacyl-[acyl-carrier-protein] synthase 3... 30 7.5
sp|Q96KS0|EGLN2_HUMAN Egl nine homolog 2 OS=Homo sapiens GN=EGLN... 29 9.8

>sp|Q9CZS3|CP063_MOUSE LisH domain-containing protein C16orf63
homolog OS=Mus musculus PE=2 SV=1
Length = 174

Score = 30.0 bits (66), Expect = 5.8
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +2

Query: 14 NPVKLKYALLCLHTEWPSSPLPQVLLAEPTQKNVKILHQLSKEVSWKPA 160
N + L Y +L P VLL E T LH +K +SWKP+
Sbjct: 102 NSIPLLYGILAHFLRGPPDGAQNVLLTEST------LHPATKHLSWKPS 144


>sp|P29182|TXW8_NAJNA Weak neurotoxin 8 OS=Naja naja PE=1 SV=1
Length = 65

Score = 29.6 bits (65), Expect = 7.5
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3

Query: 54 RNGRQVLYLKFC*QNQLKKM*RYFINCPKKSVGSQPCNLIECIAKNSSN 200
RNG ++ + KF +N L K RY I C ++P +++C + + N
Sbjct: 18 RNGEKICFKKFDQRNLLGK--RYEIGCAATCPEAKPREIVQCCSTDKCN 64


>sp|Q3B6K8|FABH_PELLD 3-oxoacyl-[acyl-carrier-protein] synthase 3
OS=Pelodictyon luteolum (strain DSM 273) GN=fabH PE=3
SV=1
Length = 329

Score = 29.6 bits (65), Expect = 7.5
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3

Query: 318 GIVHTLTHHNIHMSIHFLYQSTSSIFGANMLSLLQIA 428
G +H TH + +H++YQ +F + + S+ +A
Sbjct: 199 GSLHPATHDTVDQHLHYIYQDGRMVFKSAVTSMADVA 235


>sp|Q96KS0|EGLN2_HUMAN Egl nine homolog 2 OS=Homo sapiens GN=EGLN2
PE=1 SV=1
Length = 407

Score = 29.3 bits (64), Expect = 9.8
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3

Query: 386 GC*LIQEMYAHVDIMMRQCVDNSLLSHLILGVTKVQVA 273
GC I + AHVD ++R C L S++I G TK VA
Sbjct: 249 GCRSIGALMAHVDAVIRHCA-GRLGSYVINGRTKAMVA 285


tr_hit_id Q9SKV2
Definition tr|Q9SKV2|Q9SKV2_ARATH F5J5.18 OS=Arabidopsis thaliana
Align length 37
Score (bit) 34.7
E-value 2.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914009|Adiantum capillus-veneris mRNA, clone:
YMU001_000038_G12.
(487 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9SKV2|Q9SKV2_ARATH F5J5.18 OS=Arabidopsis thaliana PE=4 SV=1 35 2.5
tr|B6LNG4|B6LNG4_BRAFL Putative uncharacterized protein OS=Branc... 33 9.3

>tr|Q9SKV2|Q9SKV2_ARATH F5J5.18 OS=Arabidopsis thaliana PE=4 SV=1
Length = 387

Score = 34.7 bits (78), Expect = 2.5
Identities = 10/37 (27%), Positives = 25/37 (67%)
Frame = +2

Query: 350 PHEHTFPVSINIQHFWCKYAIPASNSTQLLCIHNSIH 460
P+++T+ + I ++H W +Y++ A S +++ + +IH
Sbjct: 16 PYKNTWRIQIKLRHVWRQYSVKAGESIEMILVDEAIH 52


>tr|B6LNG4|B6LNG4_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_72654 PE=4 SV=1
Length = 247

Score = 32.7 bits (73), Expect = 9.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -2

Query: 462 GWILLCMHSNCVLFEAGIAYLHQKCWMLI 376
GW C++S C++ EAG+ +H CW L+
Sbjct: 160 GW---CVYSPCLVLEAGVFTVHAWCWRLV 185