BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914022|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_A04.
         (560 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9UBG0|MRC2_HUMAN C-type mannose receptor 2 OS=Homo sapiens G...    32   2.1  
sp|A8MT65|YL018_HUMAN Putative zinc finger LOC440122 OS=Homo sap...    32   2.8  
sp|P51179|NR4A3_RAT Nuclear receptor subfamily 4 group A member ...    31   3.6  
sp|Q9QZB6|NR4A3_MOUSE Nuclear receptor subfamily 4 group A membe...    31   3.6  
sp|Q92570|NR4A3_HUMAN Nuclear receptor subfamily 4 group A membe...    31   3.6  

>sp|Q9UBG0|MRC2_HUMAN C-type mannose receptor 2 OS=Homo sapiens
           GN=MRC2 PE=1 SV=1
          Length = 1479

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 8/49 (16%)
 Frame = +3

Query: 240 SSNRVVTLGVINC--------KTEGSLRVWWCYTHTLKIDWHCRKLVKQ 362
           S NR+  LG + C         T  SL ++ C    L + WHCR L  Q
Sbjct: 81  SRNRLFNLGTMQCLGTGWPGTNTTASLGMYECDREALNLRWHCRTLGDQ 129


>sp|A8MT65|YL018_HUMAN Putative zinc finger LOC440122 OS=Homo
           sapiens PE=2 SV=2
          Length = 544

 Score = 31.6 bits (70), Expect = 2.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = +3

Query: 312 YTHTLKIDWHCRKLVKQHW*PGAGSRQV 395
           ++ TL+ DW C K+ KQH  PG   RQ+
Sbjct: 148 WSSTLREDWECHKIRKQHKIPGGHWRQM 175


>sp|P51179|NR4A3_RAT Nuclear receptor subfamily 4 group A member 3
           OS=Rattus norvegicus GN=Nr4a3 PE=2 SV=1
          Length = 628

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = -3

Query: 267 LPRSQLDLSCTCSFLQFSSLSAMLDFTCANSPFF---SVSTRFLACFQAHNVWLDYLLPN 97
           LP+    L    +FL+   L   +    A   F     +    L C +    WLD +   
Sbjct: 463 LPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSIKDF 522

Query: 96  SMKLQTLTLKLNLRCCSCSLAWVHE 22
           S+ LQ+L L +    C  +L+ + E
Sbjct: 523 SLNLQSLNLDIQALACLSALSMITE 547


>sp|Q9QZB6|NR4A3_MOUSE Nuclear receptor subfamily 4 group A member 3
           OS=Mus musculus GN=Nr4a3 PE=2 SV=1
          Length = 627

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = -3

Query: 267 LPRSQLDLSCTCSFLQFSSLSAMLDFTCANSPFF---SVSTRFLACFQAHNVWLDYLLPN 97
           LP+    L    +FL+   L   +    A   F     +    L C +    WLD +   
Sbjct: 462 LPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSIKDF 521

Query: 96  SMKLQTLTLKLNLRCCSCSLAWVHE 22
           S+ LQ+L L +    C  +L+ + E
Sbjct: 522 SLNLQSLNLDIQALACLSALSMITE 546


>sp|Q92570|NR4A3_HUMAN Nuclear receptor subfamily 4 group A member 3
           OS=Homo sapiens GN=NR4A3 PE=2 SV=3
          Length = 626

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 3/85 (3%)
 Frame = -3

Query: 267 LPRSQLDLSCTCSFLQFSSLSAMLDFTCANSPFF---SVSTRFLACFQAHNVWLDYLLPN 97
           LP+    L    +FL+   L   +    A   F     +    L C +    WLD +   
Sbjct: 461 LPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSIKDF 520

Query: 96  SMKLQTLTLKLNLRCCSCSLAWVHE 22
           S+ LQ+L L +    C  +L+ + E
Sbjct: 521 SLNLQSLNLDIQALACLSALSMITE 545

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914022|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_A04.
         (560 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A4HLK9|A4HLK9_LEIBR Putative uncharacterized protein OS=Leish...    34   6.2  

>tr|A4HLK9|A4HLK9_LEIBR Putative uncharacterized protein OS=Leishmania
            braziliensis GN=LbrM33_V2.1750 PE=4 SV=1
          Length = 3112

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 1/93 (1%)
 Frame = -1

Query: 437  PVSETRSLLTVNFLYLPTPCTWLPMLLD*FPAMPINFECMCVTPPHPQASLSLAIDNSQG 258
            P+SE+  L T      PT  TW P      P+ PI        P HP +S ++  D  +G
Sbjct: 876  PISES-GLFTAGHTDRPT--TWTPFAFAMTPSEPIT---PLPEPHHPSSSTTIQRDEEEG 929

Query: 257  HNSIXXXXXXXXXXXX*VLCL-TLPVQIPPSSV 162
            H                 L + T+ +Q+PP++V
Sbjct: 930  HQEAGEDNAGRRTMETSALSMPTVNLQVPPTAV 962