BP914027
Clone id YMU001_000039_A09
Library
Length 612
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_A09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GTCTGGTGAACTCGGATGCGAGGGTAAGTGATGACTGGCAAACTCCATAGCCATACTATT
CAATCTGTCCAGATAGGAATCTACAGGAAGGGCGACTGGCGAATGTGACACAAGAGCATC
ATCTTCGGAGGAGACTTCAAGGGCAGCCCTTGCAAGATCCAAGGTGTAACTTACCCTGTT
ATGTTTTCCATACTCGCTGCTTGTAAGCTGTGTCAATTGTTTCACAAAACTTTCTCGGGC
AGCCTTAGCGTGGCCTGTATCAATTCCAGCCTGGTCCATGAGATCGTGCAAAAAGAGACC
GTGAGGAGCTAGGACTGCATCGTCACAATGGTGACCGGAGCCATGGCTTGTAGGAAGCTG
TGCATGGATGAAACTCTGCTTACGGCCTTTCAATCTGTATGTTGGCGCATAGCATGTGCT
TTCTGCTGAGGAAAATCCAAGCCCTCTCTGACCATGCTTAAAGCTGCATGTTGGAATCTG
CCAACCATAAGCGTTAATATTGGCTGCCTGTACAGCCACCATCCGGAAAGCCTAACTTCT
AAGCGAAGAGATGGAGACGAGCAAGGAAAGCTTCGAATCTTGTGCTCAACGAGGGCAAGA
AGCTTCAATGAA
■■Homology search results ■■ -
sp_hit_id Q80T03
Definition sp|Q80T03|MUC6_MOUSE Mucin-6 OS=Mus musculus
Align length 44
Score (bit) 30.4
E-value 7.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914027|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_A09.
(612 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q80T03|MUC6_MOUSE Mucin-6 OS=Mus musculus GN=Muc6 PE=2 SV=1 30 7.5
sp|Q63WP4|KYNU_BURPS Kynureninase OS=Burkholderia pseudomallei G... 30 9.7
sp|A3N6H3|KYNU_BURP6 Kynureninase OS=Burkholderia pseudomallei (... 30 9.7
sp|Q3JVD7|KYNU_BURP1 Kynureninase OS=Burkholderia pseudomallei (... 30 9.7
sp|A3NS56|KYNU_BURP0 Kynureninase OS=Burkholderia pseudomallei (... 30 9.7
sp|A1V194|KYNU_BURMS Kynureninase OS=Burkholderia mallei (strain... 30 9.7
sp|Q62M98|KYNU_BURMA Kynureninase OS=Burkholderia mallei GN=kynU... 30 9.7
sp|A2S925|KYNU_BURM9 Kynureninase OS=Burkholderia mallei (strain... 30 9.7
sp|A3MHE2|KYNU_BURM7 Kynureninase OS=Burkholderia mallei (strain... 30 9.7
sp|Q8Y754|SYGB_LISMO Glycyl-tRNA synthetase beta subunit OS=List... 30 9.8

>sp|Q80T03|MUC6_MOUSE Mucin-6 OS=Mus musculus GN=Muc6 PE=2 SV=1
Length = 2850

Score = 30.4 bits (67), Expect = 7.5
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1

Query: 148 PCKIQGVTYPVMFSILAACKLCQLFHKTFSGSLSVACINSSLVH 279
PC GV+YP F + CK C ++ LS C ++ +++
Sbjct: 870 PCDYAGVSYPGGFELHTDCKTCTCSQGRWTCQLSTQCPSTCVLY 913


>sp|Q63WP4|KYNU_BURPS Kynureninase OS=Burkholderia pseudomallei
GN=kynU PE=3 SV=1
Length = 416

Score = 30.0 bits (66), Expect = 9.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Frame = -2

Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402
E LSGWW +R P I + G ++SMV GLD F Q HA+R+
Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308


>sp|A3N6H3|KYNU_BURP6 Kynureninase OS=Burkholderia pseudomallei
(strain 668) GN=kynU PE=3 SV=1
Length = 416

Score = 30.0 bits (66), Expect = 9.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Frame = -2

Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402
E LSGWW +R P I + G ++SMV GLD F Q HA+R+
Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308


>sp|Q3JVD7|KYNU_BURP1 Kynureninase OS=Burkholderia pseudomallei
(strain 1710b) GN=kynU PE=3 SV=1
Length = 416

Score = 30.0 bits (66), Expect = 9.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Frame = -2

Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402
E LSGWW +R P I + G ++SMV GLD F Q HA+R+
Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308


>sp|A3NS56|KYNU_BURP0 Kynureninase OS=Burkholderia pseudomallei
(strain 1106a) GN=kynU PE=3 SV=1
Length = 416

Score = 30.0 bits (66), Expect = 9.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Frame = -2

Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402
E LSGWW +R P I + G ++SMV GLD F Q HA+R+
Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308


>sp|A1V194|KYNU_BURMS Kynureninase OS=Burkholderia mallei (strain
SAVP1) GN=kynU PE=3 SV=1
Length = 416

Score = 30.0 bits (66), Expect = 9.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Frame = -2

Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402
E LSGWW +R P I + G ++SMV GLD F Q HA+R+
Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308


>sp|Q62M98|KYNU_BURMA Kynureninase OS=Burkholderia mallei GN=kynU
PE=3 SV=1
Length = 416

Score = 30.0 bits (66), Expect = 9.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Frame = -2

Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402
E LSGWW +R P I + G ++SMV GLD F Q HA+R+
Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308


>sp|A2S925|KYNU_BURM9 Kynureninase OS=Burkholderia mallei (strain
NCTC 10229) GN=kynU PE=3 SV=1
Length = 416

Score = 30.0 bits (66), Expect = 9.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Frame = -2

Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402
E LSGWW +R P I + G ++SMV GLD F Q HA+R+
Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308


>sp|A3MHE2|KYNU_BURM7 Kynureninase OS=Burkholderia mallei (strain
NCTC 10247) GN=kynU PE=3 SV=1
Length = 416

Score = 30.0 bits (66), Expect = 9.7
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%)
Frame = -2

Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402
E LSGWW +R P I + G ++SMV GLD F Q HA+R+
Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308


>sp|Q8Y754|SYGB_LISMO Glycyl-tRNA synthetase beta subunit
OS=Listeria monocytogenes GN=glyS PE=3 SV=1
Length = 688

Score = 30.0 bits (66), Expect = 9.8
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = -1

Query: 498 INAYGWQIPTCSFKHGQRGLGFSSAESTCYAPTYRLKGRKQSFIHAQLPT---SHGSGHH 328
I A GW IP R + AE + P +K Q+F+ +L H H
Sbjct: 490 IQANGWNIPMLEVI--SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHD 547

Query: 327 CDDAVLAPHGLFLHDLMDQAGIDTGHAKA 241
DAV+ + L+D+A I HA+A
Sbjct: 548 IIDAVIGGDPNVIPQLIDRAQILNEHAEA 576


tr_hit_id A9S0A0
Definition tr|A9S0A0|A9S0A0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 129
Score (bit) 89.4
E-value 2.0e-16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914027|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_A09.
(612 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9S0A0|A9S0A0_PHYPA Predicted protein OS=Physcomitrella paten... 89 2e-16
tr|B6UDF5|B6UDF5_MAIZE Putative uncharacterized protein OS=Zea m... 85 4e-15
tr|Q9LIY4|Q9LIY4_ORYSJ Putative uncharacterized protein P0693B08... 82 2e-14
tr|Q0JNQ3|Q0JNQ3_ORYSJ Os01g0272800 protein OS=Oryza sativa subs... 82 2e-14
tr|B8ACM8|B8ACM8_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14
tr|A2ZRP2|A2ZRP2_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14
tr|A9P934|A9P934_POPTR Putative uncharacterized protein OS=Popul... 77 6e-13
tr|A7Q5F5|A7Q5F5_VITVI Chromosome undetermined scaffold_53, whol... 74 7e-12
tr|B4GC09|B4GC09_DROPE GL10477 OS=Drosophila persimilis GN=GL104... 43 0.017
tr|B5E0L8|B5E0L8_DROPS GA24381 OS=Drosophila pseudoobscura pseud... 42 0.028
tr|Q8SWW8|Q8SWW8_DROME Defense repressor 1 OS=Drosophila melanog... 41 0.063
tr|B4QHI7|B4QHI7_DROSI GD25123 OS=Drosophila simulans GN=GD25123... 41 0.063
tr|B4P5H0|B4P5H0_DROYA GE11860 OS=Drosophila yakuba GN=GE11860 P... 41 0.063
tr|B4MY55|B4MY55_DROWI GK22137 OS=Drosophila willistoni GN=GK221... 41 0.063
tr|B4I859|B4I859_DROSE GM15636 OS=Drosophila sechellia GN=GM1563... 41 0.063
tr|B3NLJ4|B3NLJ4_DROER GG21784 OS=Drosophila erecta GN=GG21784 P... 41 0.063
tr|B3MED8|B3MED8_DROAN GF13016 OS=Drosophila ananassae GN=GF1301... 41 0.063
tr|B4J9C7|B4J9C7_DROGR GH21423 OS=Drosophila grimshawi GN=GH2142... 37 0.91
tr|Q13PQ3|Q13PQ3_BURXL Transcriptional regulator, IclR family OS... 37 1.2
tr|B4LPS4|B4LPS4_DROVI GJ20395 OS=Drosophila virilis GN=GJ20395 ... 36 2.0
tr|B4KQH5|B4KQH5_DROMO GI18599 OS=Drosophila mojavensis GN=GI185... 35 2.7
tr|A9KUG8|A9KUG8_SHEB9 Sigma54 specific transcriptional regulato... 35 3.5
tr|Q969A4|Q969A4_BRABE Complement component C3 OS=Branchiostoma ... 34 5.9

>tr|A9S0A0|A9S0A0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_162087 PE=4 SV=1
Length = 808

Score = 89.4 bits (220), Expect = 2e-16
Identities = 56/129 (43%), Positives = 74/129 (57%), Gaps = 24/129 (18%)
Frame = -1

Query: 351 TSHGSGHHCDDAVLAPHGLFLHDLMDQAGIDTGHAKA----------------------- 241
T G CD AV +LH LMDQAGI+T HA+
Sbjct: 379 TGEGGDKDCDGAVGTS---WLHYLMDQAGIETSHAQVQLFFPRHQDRLHLAWLNISGKQV 435

Query: 240 ARESFVKQLTQL-TSSEYGKHNRVSYTLDLARAALEVSSEDDALVSHSPVALPVDSYLDR 64
AR +F +++ L +SE + ++DLARAALE+++EDDALVSHSPV LPVD+YL+R
Sbjct: 436 ARRNFAEEIANLRAASEEVGSGKPEGSVDLARAALEIAAEDDALVSHSPVPLPVDAYLNR 495

Query: 63 LNSMAMEFA 37
L +MA+EFA
Sbjct: 496 LQAMAVEFA 504


>tr|B6UDF5|B6UDF5_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 171

Score = 84.7 bits (208), Expect = 4e-15
Identities = 44/86 (51%), Positives = 59/86 (68%)
Frame = -1

Query: 297 LFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSSEDD 118
L LHD +D G+ T HA+AARE FV Q+ +LT G +S DLARAAL V++EDD
Sbjct: 48 LVLHDSLDSVGVATAHARAAREGFVAQVGRLTRVSAGSSIAISRGPDLARAALCVAAEDD 107

Query: 117 ALVSHSPVALPVDSYLDRLNSMAMEF 40
+LVSHS V LPVD+++ RL+ ++ F
Sbjct: 108 SLVSHSSVPLPVDAFIARLDDLSTGF 133


>tr|Q9LIY4|Q9LIY4_ORYSJ Putative uncharacterized protein P0693B08.29
OS=Oryza sativa subsp. japonica GN=P0693B08.29 PE=4 SV=1
Length = 426

Score = 82.0 bits (201), Expect = 2e-14
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = -1

Query: 306 PHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSS 127
P + LHD ++ AG+ T HA+AARE F KQ+ +LT + +S DLARAAL V++
Sbjct: 57 PARMVLHDSLEGAGVSTEHARAAREGFAKQVGRLTRLDAETSIAISRGADLARAALCVAA 116

Query: 126 EDDALVSHSPVALPVDSYLDRLNSMAMEF 40
EDD+LVSHS V LPV++++ RL+ ++ F
Sbjct: 117 EDDSLVSHSSVPLPVEAFVSRLDDLSTGF 145


>tr|Q0JNQ3|Q0JNQ3_ORYSJ Os01g0272800 protein OS=Oryza sativa subsp.
japonica GN=Os01g0272800 PE=4 SV=1
Length = 433

Score = 82.0 bits (201), Expect = 2e-14
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = -1

Query: 306 PHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSS 127
P + LHD ++ AG+ T HA+AARE F KQ+ +LT + +S DLARAAL V++
Sbjct: 57 PARMVLHDSLEGAGVSTEHARAAREGFAKQVGRLTRLDAETSIAISRGADLARAALCVAA 116

Query: 126 EDDALVSHSPVALPVDSYLDRLNSMAMEF 40
EDD+LVSHS V LPV++++ RL+ ++ F
Sbjct: 117 EDDSLVSHSSVPLPVEAFVSRLDDLSTGF 145


>tr|B8ACM8|B8ACM8_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_01351 PE=4 SV=1
Length = 415

Score = 82.0 bits (201), Expect = 2e-14
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = -1

Query: 306 PHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSS 127
P + LHD ++ AG+ T HA+AARE F KQ+ +LT + +S DLARAAL V++
Sbjct: 57 PARMVLHDSLEGAGVSTEHARAAREGFAKQVGRLTRLDAETSIAISRGADLARAALCVAA 116

Query: 126 EDDALVSHSPVALPVDSYLDRLNSMAMEF 40
EDD+LVSHS V LPV++++ RL+ ++ F
Sbjct: 117 EDDSLVSHSSVPLPVEAFVSRLDDLSTGF 145


>tr|A2ZRP2|A2ZRP2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_001214 PE=4 SV=1
Length = 412

Score = 82.0 bits (201), Expect = 2e-14
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = -1

Query: 306 PHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSS 127
P + LHD ++ AG+ T HA+AARE F KQ+ +LT + +S DLARAAL V++
Sbjct: 57 PARMVLHDSLEGAGVSTEHARAAREGFAKQVGRLTRLDAETSIAISRGADLARAALCVAA 116

Query: 126 EDDALVSHSPVALPVDSYLDRLNSMAMEF 40
EDD+LVSHS V LPV++++ RL+ ++ F
Sbjct: 117 EDDSLVSHSSVPLPVEAFVSRLDDLSTGF 145


>tr|A9P934|A9P934_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 299

Score = 77.4 bits (189), Expect = 6e-13
Identities = 39/101 (38%), Positives = 61/101 (60%)
Frame = -1

Query: 342 GSGHHCDDAVLAPHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYT 163
G G V LHD +D +G+DT HA+ AR++F+ Q+ L+ E ++
Sbjct: 40 GGGSELPPPVTPDFKFALHDALDSSGVDTTHAREARQNFMSQIKGLSRIEREVSISINRR 99

Query: 162 LDLARAALEVSSEDDALVSHSPVALPVDSYLDRLNSMAMEF 40
+DLA+ A+ +S+ED AL+S S +ALPVD +++RL + MEF
Sbjct: 100 VDLAKTAIYISAEDFALMSQSSLALPVDPFIERLFDLTMEF 140


>tr|A7Q5F5|A7Q5F5_VITVI Chromosome undetermined scaffold_53, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00030921001 PE=4 SV=1
Length = 423

Score = 73.9 bits (180), Expect = 7e-12
Identities = 32/84 (38%), Positives = 56/84 (66%)
Frame = -1

Query: 291 LHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSSEDDAL 112
LH +D G D HAK AR+ F ++ +L+ E ++ +DL + AL +++EDD+L
Sbjct: 58 LHHALDALGTDIAHAKVARDGFCSEIKRLSDIERETSISINRGVDLGKTALYIAAEDDSL 117

Query: 111 VSHSPVALPVDSYLDRLNSMAMEF 40
+SHS V LPVD++++RL+ ++M++
Sbjct: 118 ISHSSVPLPVDAFIERLDDLSMDY 141


>tr|B4GC09|B4GC09_DROPE GL10477 OS=Drosophila persimilis GN=GL10477
PE=4 SV=1
Length = 694

Score = 42.7 bits (99), Expect = 0.017
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +1

Query: 316 CIVTMVTGAMACRKLCMDETLLTAFQSVCWRIACAFC*GKSKPSLTMLKAACWNLPTISV 495
C+ T ++ AM C K+CMD + T F C IACA C A C N P V
Sbjct: 552 CVDTRISEAMQC-KICMDRAINTVFNPCCHVIACAQC-----------AARCSNCPNCRV 599

Query: 496 NIGCLYSHH--PESLTSKRRDGDEQG 567
I + + PE TS+ G G
Sbjct: 600 KITSVVKIYLPPELRTSQSESGGGSG 625


>tr|B5E0L8|B5E0L8_DROPS GA24381 OS=Drosophila pseudoobscura
pseudoobscura GN=GA24381 PE=4 SV=1
Length = 691

Score = 42.0 bits (97), Expect = 0.028
Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Frame = +1

Query: 316 CIVTMVTGAMACRKLCMDETLLTAFQSVCWRIACAFC*GKSKPSLTMLKAACWNLPTISV 495
C+ T ++ AM C K+CMD + T F C IACA C A C N P V
Sbjct: 552 CVDTRISEAMQC-KICMDRAINTVFNPCCHVIACAQC-----------AARCSNCPNCRV 599

Query: 496 NIGCLYSHH--PESLTSKRRDGDEQG 567
I + + PE TS+ G G
Sbjct: 600 KITSVVKIYLPPELRTSQSESGGGGG 625