BP914027 |
Clone id |
YMU001_000039_A09 |
Library |
YMU01 |
Length |
612 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000039_A09. |
Accession |
BP914027 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GTCTGGTGAACTCGGATGCGAGGGTAAGTGATGACTGGCAAACTCCATAGCCATACTATT CAATCTGTCCAGATAGGAATCTACAGGAAGGGCGACTGGCGAATGTGACACAAGAGCATC ATCTTCGGAGGAGACTTCAAGGGCAGCCCTTGCAAGATCCAAGGTGTAACTTACCCTGTT ATGTTTTCCATACTCGCTGCTTGTAAGCTGTGTCAATTGTTTCACAAAACTTTCTCGGGC AGCCTTAGCGTGGCCTGTATCAATTCCAGCCTGGTCCATGAGATCGTGCAAAAAGAGACC GTGAGGAGCTAGGACTGCATCGTCACAATGGTGACCGGAGCCATGGCTTGTAGGAAGCTG TGCATGGATGAAACTCTGCTTACGGCCTTTCAATCTGTATGTTGGCGCATAGCATGTGCT TTCTGCTGAGGAAAATCCAAGCCCTCTCTGACCATGCTTAAAGCTGCATGTTGGAATCTG CCAACCATAAGCGTTAATATTGGCTGCCTGTACAGCCACCATCCGGAAAGCCTAACTTCT AAGCGAAGAGATGGAGACGAGCAAGGAAAGCTTCGAATCTTGTGCTCAACGAGGGCAAGA AGCTTCAATGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q80T03 |
Definition |
sp|Q80T03|MUC6_MOUSE Mucin-6 OS=Mus musculus |
Align length |
44 |
Score (bit) |
30.4 |
E-value |
7.5 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914027|Adiantum capillus-veneris mRNA, clone: YMU001_000039_A09. (612 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q80T03|MUC6_MOUSE Mucin-6 OS=Mus musculus GN=Muc6 PE=2 SV=1 30 7.5 sp|Q63WP4|KYNU_BURPS Kynureninase OS=Burkholderia pseudomallei G... 30 9.7 sp|A3N6H3|KYNU_BURP6 Kynureninase OS=Burkholderia pseudomallei (... 30 9.7 sp|Q3JVD7|KYNU_BURP1 Kynureninase OS=Burkholderia pseudomallei (... 30 9.7 sp|A3NS56|KYNU_BURP0 Kynureninase OS=Burkholderia pseudomallei (... 30 9.7 sp|A1V194|KYNU_BURMS Kynureninase OS=Burkholderia mallei (strain... 30 9.7 sp|Q62M98|KYNU_BURMA Kynureninase OS=Burkholderia mallei GN=kynU... 30 9.7 sp|A2S925|KYNU_BURM9 Kynureninase OS=Burkholderia mallei (strain... 30 9.7 sp|A3MHE2|KYNU_BURM7 Kynureninase OS=Burkholderia mallei (strain... 30 9.7 sp|Q8Y754|SYGB_LISMO Glycyl-tRNA synthetase beta subunit OS=List... 30 9.8
>sp|Q80T03|MUC6_MOUSE Mucin-6 OS=Mus musculus GN=Muc6 PE=2 SV=1 Length = 2850
Score = 30.4 bits (67), Expect = 7.5 Identities = 13/44 (29%), Positives = 22/44 (50%) Frame = +1
Query: 148 PCKIQGVTYPVMFSILAACKLCQLFHKTFSGSLSVACINSSLVH 279 PC GV+YP F + CK C ++ LS C ++ +++ Sbjct: 870 PCDYAGVSYPGGFELHTDCKTCTCSQGRWTCQLSTQCPSTCVLY 913
>sp|Q63WP4|KYNU_BURPS Kynureninase OS=Burkholderia pseudomallei GN=kynU PE=3 SV=1 Length = 416
Score = 30.0 bits (66), Expect = 9.7 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Frame = -2
Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402 E LSGWW +R P I + G ++SMV GLD F Q HA+R+ Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308
>sp|A3N6H3|KYNU_BURP6 Kynureninase OS=Burkholderia pseudomallei (strain 668) GN=kynU PE=3 SV=1 Length = 416
Score = 30.0 bits (66), Expect = 9.7 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Frame = -2
Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402 E LSGWW +R P I + G ++SMV GLD F Q HA+R+ Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308
>sp|Q3JVD7|KYNU_BURP1 Kynureninase OS=Burkholderia pseudomallei (strain 1710b) GN=kynU PE=3 SV=1 Length = 416
Score = 30.0 bits (66), Expect = 9.7 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Frame = -2
Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402 E LSGWW +R P I + G ++SMV GLD F Q HA+R+ Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308
>sp|A3NS56|KYNU_BURP0 Kynureninase OS=Burkholderia pseudomallei (strain 1106a) GN=kynU PE=3 SV=1 Length = 416
Score = 30.0 bits (66), Expect = 9.7 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Frame = -2
Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402 E LSGWW +R P I + G ++SMV GLD F Q HA+R+ Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308
>sp|A1V194|KYNU_BURMS Kynureninase OS=Burkholderia mallei (strain SAVP1) GN=kynU PE=3 SV=1 Length = 416
Score = 30.0 bits (66), Expect = 9.7 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Frame = -2
Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402 E LSGWW +R P I + G ++SMV GLD F Q HA+R+ Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308
>sp|Q62M98|KYNU_BURMA Kynureninase OS=Burkholderia mallei GN=kynU PE=3 SV=1 Length = 416
Score = 30.0 bits (66), Expect = 9.7 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Frame = -2
Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402 E LSGWW +R P I + G ++SMV GLD F Q HA+R+ Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308
>sp|A2S925|KYNU_BURM9 Kynureninase OS=Burkholderia mallei (strain NCTC 10229) GN=kynU PE=3 SV=1 Length = 416
Score = 30.0 bits (66), Expect = 9.7 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Frame = -2
Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402 E LSGWW +R P I + G ++SMV GLD F Q HA+R+ Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308
>sp|A3MHE2|KYNU_BURM7 Kynureninase OS=Burkholderia mallei (strain NCTC 10247) GN=kynU PE=3 SV=1 Length = 416
Score = 30.0 bits (66), Expect = 9.7 Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 13/59 (22%) Frame = -2
Query: 539 EVRLSGWWLYRQP------------ILTLMVGRFQHAALSMVREGLD-FPQQKAHAMRQ 402 E LSGWW +R P I + G ++SMV GLD F Q HA+R+ Sbjct: 250 EQPLSGWWGHRAPFAMQPAFEPDPGIARFLCGTQPIVSMSMVECGLDVFAQTDMHAIRR 308
>sp|Q8Y754|SYGB_LISMO Glycyl-tRNA synthetase beta subunit OS=Listeria monocytogenes GN=glyS PE=3 SV=1 Length = 688
Score = 30.0 bits (66), Expect = 9.8 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%) Frame = -1
Query: 498 INAYGWQIPTCSFKHGQRGLGFSSAESTCYAPTYRLKGRKQSFIHAQLPT---SHGSGHH 328 I A GW IP R + AE + P +K Q+F+ +L H H Sbjct: 490 IQANGWNIPMLEVI--SRIVDMERAEGSTELPDADVKKEVQTFLKNRLRVILQGHHIRHD 547
Query: 327 CDDAVLAPHGLFLHDLMDQAGIDTGHAKA 241 DAV+ + L+D+A I HA+A Sbjct: 548 IIDAVIGGDPNVIPQLIDRAQILNEHAEA 576
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9S0A0 |
Definition |
tr|A9S0A0|A9S0A0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
129 |
Score (bit) |
89.4 |
E-value |
2.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914027|Adiantum capillus-veneris mRNA, clone: YMU001_000039_A09. (612 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9S0A0|A9S0A0_PHYPA Predicted protein OS=Physcomitrella paten... 89 2e-16 tr|B6UDF5|B6UDF5_MAIZE Putative uncharacterized protein OS=Zea m... 85 4e-15 tr|Q9LIY4|Q9LIY4_ORYSJ Putative uncharacterized protein P0693B08... 82 2e-14 tr|Q0JNQ3|Q0JNQ3_ORYSJ Os01g0272800 protein OS=Oryza sativa subs... 82 2e-14 tr|B8ACM8|B8ACM8_ORYSI Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A2ZRP2|A2ZRP2_ORYSJ Putative uncharacterized protein OS=Oryza... 82 2e-14 tr|A9P934|A9P934_POPTR Putative uncharacterized protein OS=Popul... 77 6e-13 tr|A7Q5F5|A7Q5F5_VITVI Chromosome undetermined scaffold_53, whol... 74 7e-12 tr|B4GC09|B4GC09_DROPE GL10477 OS=Drosophila persimilis GN=GL104... 43 0.017 tr|B5E0L8|B5E0L8_DROPS GA24381 OS=Drosophila pseudoobscura pseud... 42 0.028 tr|Q8SWW8|Q8SWW8_DROME Defense repressor 1 OS=Drosophila melanog... 41 0.063 tr|B4QHI7|B4QHI7_DROSI GD25123 OS=Drosophila simulans GN=GD25123... 41 0.063 tr|B4P5H0|B4P5H0_DROYA GE11860 OS=Drosophila yakuba GN=GE11860 P... 41 0.063 tr|B4MY55|B4MY55_DROWI GK22137 OS=Drosophila willistoni GN=GK221... 41 0.063 tr|B4I859|B4I859_DROSE GM15636 OS=Drosophila sechellia GN=GM1563... 41 0.063 tr|B3NLJ4|B3NLJ4_DROER GG21784 OS=Drosophila erecta GN=GG21784 P... 41 0.063 tr|B3MED8|B3MED8_DROAN GF13016 OS=Drosophila ananassae GN=GF1301... 41 0.063 tr|B4J9C7|B4J9C7_DROGR GH21423 OS=Drosophila grimshawi GN=GH2142... 37 0.91 tr|Q13PQ3|Q13PQ3_BURXL Transcriptional regulator, IclR family OS... 37 1.2 tr|B4LPS4|B4LPS4_DROVI GJ20395 OS=Drosophila virilis GN=GJ20395 ... 36 2.0 tr|B4KQH5|B4KQH5_DROMO GI18599 OS=Drosophila mojavensis GN=GI185... 35 2.7 tr|A9KUG8|A9KUG8_SHEB9 Sigma54 specific transcriptional regulato... 35 3.5 tr|Q969A4|Q969A4_BRABE Complement component C3 OS=Branchiostoma ... 34 5.9
>tr|A9S0A0|A9S0A0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_162087 PE=4 SV=1 Length = 808
Score = 89.4 bits (220), Expect = 2e-16 Identities = 56/129 (43%), Positives = 74/129 (57%), Gaps = 24/129 (18%) Frame = -1
Query: 351 TSHGSGHHCDDAVLAPHGLFLHDLMDQAGIDTGHAKA----------------------- 241 T G CD AV +LH LMDQAGI+T HA+ Sbjct: 379 TGEGGDKDCDGAVGTS---WLHYLMDQAGIETSHAQVQLFFPRHQDRLHLAWLNISGKQV 435
Query: 240 ARESFVKQLTQL-TSSEYGKHNRVSYTLDLARAALEVSSEDDALVSHSPVALPVDSYLDR 64 AR +F +++ L +SE + ++DLARAALE+++EDDALVSHSPV LPVD+YL+R Sbjct: 436 ARRNFAEEIANLRAASEEVGSGKPEGSVDLARAALEIAAEDDALVSHSPVPLPVDAYLNR 495
Query: 63 LNSMAMEFA 37 L +MA+EFA Sbjct: 496 LQAMAVEFA 504
>tr|B6UDF5|B6UDF5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 171
Score = 84.7 bits (208), Expect = 4e-15 Identities = 44/86 (51%), Positives = 59/86 (68%) Frame = -1
Query: 297 LFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSSEDD 118 L LHD +D G+ T HA+AARE FV Q+ +LT G +S DLARAAL V++EDD Sbjct: 48 LVLHDSLDSVGVATAHARAAREGFVAQVGRLTRVSAGSSIAISRGPDLARAALCVAAEDD 107
Query: 117 ALVSHSPVALPVDSYLDRLNSMAMEF 40 +LVSHS V LPVD+++ RL+ ++ F Sbjct: 108 SLVSHSSVPLPVDAFIARLDDLSTGF 133
>tr|Q9LIY4|Q9LIY4_ORYSJ Putative uncharacterized protein P0693B08.29 OS=Oryza sativa subsp. japonica GN=P0693B08.29 PE=4 SV=1 Length = 426
Score = 82.0 bits (201), Expect = 2e-14 Identities = 42/89 (47%), Positives = 61/89 (68%) Frame = -1
Query: 306 PHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSS 127 P + LHD ++ AG+ T HA+AARE F KQ+ +LT + +S DLARAAL V++ Sbjct: 57 PARMVLHDSLEGAGVSTEHARAAREGFAKQVGRLTRLDAETSIAISRGADLARAALCVAA 116
Query: 126 EDDALVSHSPVALPVDSYLDRLNSMAMEF 40 EDD+LVSHS V LPV++++ RL+ ++ F Sbjct: 117 EDDSLVSHSSVPLPVEAFVSRLDDLSTGF 145
>tr|Q0JNQ3|Q0JNQ3_ORYSJ Os01g0272800 protein OS=Oryza sativa subsp. japonica GN=Os01g0272800 PE=4 SV=1 Length = 433
Score = 82.0 bits (201), Expect = 2e-14 Identities = 42/89 (47%), Positives = 61/89 (68%) Frame = -1
Query: 306 PHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSS 127 P + LHD ++ AG+ T HA+AARE F KQ+ +LT + +S DLARAAL V++ Sbjct: 57 PARMVLHDSLEGAGVSTEHARAAREGFAKQVGRLTRLDAETSIAISRGADLARAALCVAA 116
Query: 126 EDDALVSHSPVALPVDSYLDRLNSMAMEF 40 EDD+LVSHS V LPV++++ RL+ ++ F Sbjct: 117 EDDSLVSHSSVPLPVEAFVSRLDDLSTGF 145
>tr|B8ACM8|B8ACM8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_01351 PE=4 SV=1 Length = 415
Score = 82.0 bits (201), Expect = 2e-14 Identities = 42/89 (47%), Positives = 61/89 (68%) Frame = -1
Query: 306 PHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSS 127 P + LHD ++ AG+ T HA+AARE F KQ+ +LT + +S DLARAAL V++ Sbjct: 57 PARMVLHDSLEGAGVSTEHARAAREGFAKQVGRLTRLDAETSIAISRGADLARAALCVAA 116
Query: 126 EDDALVSHSPVALPVDSYLDRLNSMAMEF 40 EDD+LVSHS V LPV++++ RL+ ++ F Sbjct: 117 EDDSLVSHSSVPLPVEAFVSRLDDLSTGF 145
>tr|A2ZRP2|A2ZRP2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001214 PE=4 SV=1 Length = 412
Score = 82.0 bits (201), Expect = 2e-14 Identities = 42/89 (47%), Positives = 61/89 (68%) Frame = -1
Query: 306 PHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSS 127 P + LHD ++ AG+ T HA+AARE F KQ+ +LT + +S DLARAAL V++ Sbjct: 57 PARMVLHDSLEGAGVSTEHARAAREGFAKQVGRLTRLDAETSIAISRGADLARAALCVAA 116
Query: 126 EDDALVSHSPVALPVDSYLDRLNSMAMEF 40 EDD+LVSHS V LPV++++ RL+ ++ F Sbjct: 117 EDDSLVSHSSVPLPVEAFVSRLDDLSTGF 145
>tr|A9P934|A9P934_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 Length = 299
Score = 77.4 bits (189), Expect = 6e-13 Identities = 39/101 (38%), Positives = 61/101 (60%) Frame = -1
Query: 342 GSGHHCDDAVLAPHGLFLHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYT 163 G G V LHD +D +G+DT HA+ AR++F+ Q+ L+ E ++ Sbjct: 40 GGGSELPPPVTPDFKFALHDALDSSGVDTTHAREARQNFMSQIKGLSRIEREVSISINRR 99
Query: 162 LDLARAALEVSSEDDALVSHSPVALPVDSYLDRLNSMAMEF 40 +DLA+ A+ +S+ED AL+S S +ALPVD +++RL + MEF Sbjct: 100 VDLAKTAIYISAEDFALMSQSSLALPVDPFIERLFDLTMEF 140
>tr|A7Q5F5|A7Q5F5_VITVI Chromosome undetermined scaffold_53, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030921001 PE=4 SV=1 Length = 423
Score = 73.9 bits (180), Expect = 7e-12 Identities = 32/84 (38%), Positives = 56/84 (66%) Frame = -1
Query: 291 LHDLMDQAGIDTGHAKAARESFVKQLTQLTSSEYGKHNRVSYTLDLARAALEVSSEDDAL 112 LH +D G D HAK AR+ F ++ +L+ E ++ +DL + AL +++EDD+L Sbjct: 58 LHHALDALGTDIAHAKVARDGFCSEIKRLSDIERETSISINRGVDLGKTALYIAAEDDSL 117
Query: 111 VSHSPVALPVDSYLDRLNSMAMEF 40 +SHS V LPVD++++RL+ ++M++ Sbjct: 118 ISHSSVPLPVDAFIERLDDLSMDY 141
>tr|B4GC09|B4GC09_DROPE GL10477 OS=Drosophila persimilis GN=GL10477 PE=4 SV=1 Length = 694
Score = 42.7 bits (99), Expect = 0.017 Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 2/86 (2%) Frame = +1
Query: 316 CIVTMVTGAMACRKLCMDETLLTAFQSVCWRIACAFC*GKSKPSLTMLKAACWNLPTISV 495 C+ T ++ AM C K+CMD + T F C IACA C A C N P V Sbjct: 552 CVDTRISEAMQC-KICMDRAINTVFNPCCHVIACAQC-----------AARCSNCPNCRV 599
Query: 496 NIGCLYSHH--PESLTSKRRDGDEQG 567 I + + PE TS+ G G Sbjct: 600 KITSVVKIYLPPELRTSQSESGGGSG 625
>tr|B5E0L8|B5E0L8_DROPS GA24381 OS=Drosophila pseudoobscura pseudoobscura GN=GA24381 PE=4 SV=1 Length = 691
Score = 42.0 bits (97), Expect = 0.028 Identities = 29/86 (33%), Positives = 37/86 (43%), Gaps = 2/86 (2%) Frame = +1
Query: 316 CIVTMVTGAMACRKLCMDETLLTAFQSVCWRIACAFC*GKSKPSLTMLKAACWNLPTISV 495 C+ T ++ AM C K+CMD + T F C IACA C A C N P V Sbjct: 552 CVDTRISEAMQC-KICMDRAINTVFNPCCHVIACAQC-----------AARCSNCPNCRV 599
Query: 496 NIGCLYSHH--PESLTSKRRDGDEQG 567 I + + PE TS+ G G Sbjct: 600 KITSVVKIYLPPELRTSQSESGGGGG 625
|