BP914031 |
Clone id |
YMU001_000039_B01 |
Library |
YMU01 |
Length |
543 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000039_B01. |
Accession |
BP914031 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL4194Contig1 |
Sequence |
CCAAAAGGGAGGTGTCTTTGATATACTTCAGTATGTTGTTGCTGCTCTATTAGTCAGATG TGGACATCTATTCTAATAATGTCCCAACTCTCCACATTCAGAGCATCAAACATCAAGCGT TATGCTTCACCAACGACCATAGAGCAGAAGATAGCCCGTTTATGTCAAGGTTTAAGAGAA CCAATCAGCTCCCGATTAGAAGCCATGAAACCTACTACTGTGCAAGATGCTTTACTACGA GCTAAGCCCTTAACGAAGGAGTAAGGGATTAGAAGGAGAGTTGAATAAAATCAAAGTTTT AACGATGCCAGACGACCGATAAGGCTTCCCAATAATAAAGGACAACCATAGAGAGCTTAT GTTGCTAATGCTCAAAATCCTTCACGCTACAAACTTTGAGTAGTACTCTTCCAAGGATAA TCTGTATTGTTTTAAGCTAAAGAACTCATTCATCTTCAACACTTCATGGGCAGGAGGTAA GTATCTTTCTTTTACTGCTTGTTTAATCTCCCTCAACTCTGGGAGTTCTCCAATACTCCT ATG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q12476 |
Definition |
sp|Q12476|AIR2_YEAST Protein AIR2 OS=Saccharomyces cerevisiae |
Align length |
24 |
Score (bit) |
32.3 |
E-value |
1.5 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5C358 |
Definition |
tr|A5C358|A5C358_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
40 |
Score (bit) |
36.6 |
E-value |
0.89 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914031|Adiantum capillus-veneris mRNA, clone: YMU001_000039_B01. (543 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5C358|A5C358_VITVI Putative uncharacterized protein OS=Vitis... 37 0.89 tr|A5BWT5|A5BWT5_VITVI Putative uncharacterized protein OS=Vitis... 37 0.89 tr|A5BU14|A5BU14_VITVI Putative uncharacterized protein OS=Vitis... 37 0.89 tr|A5AVS3|A5AVS3_VITVI Putative uncharacterized protein OS=Vitis... 37 0.89 tr|A5ACJ6|A5ACJ6_VITVI Putative uncharacterized protein OS=Vitis... 37 0.89 tr|Q65352|Q65352_NPVAC ORF A span 522-1895 OS=Autographa califor... 35 2.6 tr|Q0ZLH4|Q0ZLH4_9ORYZ Polyprotein OS=Oryza australiensis PE=4 SV=1 35 2.6 tr|A5B9I7|A5B9I7_VITVI Putative uncharacterized protein OS=Vitis... 35 3.4 tr|Q7XKY8|Q7XKY8_ORYSJ OSJNBa0022F16.16 protein OS=Oryza sativa ... 34 5.8 tr|Q75H43|Q75H43_ORYSJ Putative uncharacterized protein OSJNBa00... 34 5.8 tr|Q2R1L3|Q2R1L3_ORYSJ Retrotransposon protein, putative, Ty3-gy... 34 5.8 tr|Q2R193|Q2R193_ORYSJ Retrotransposon protein, putative, Ty3-gy... 34 5.8 tr|Q2QR60|Q2QR60_ORYSJ Retrotransposon protein, putative, Ty3-gy... 34 5.8 tr|Q7XUA3|Q7XUA3_ORYSJ OSJNBa0019D11.8 protein OS=Oryza sativa s... 33 7.6 tr|Q2RB45|Q2RB45_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 7.6 tr|Q01I31|Q01I31_ORYSA OSIGBa0145G11.8 protein OS=Oryza sativa G... 33 7.6 tr|Q7XUI0|Q7XUI0_ORYSJ OSJNBa0020J04.2 protein OS=Oryza sativa s... 33 9.9 tr|Q7G774|Q7G774_ORYSJ Putative polyprotein (Retrotransposon pro... 33 9.9 tr|Q53QL2|Q53QL2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 9.9 tr|Q53MS0|Q53MS0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 9.9 tr|Q2QPU5|Q2QPU5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 9.9 tr|Q10G32|Q10G32_ORYSJ Retrotransposon protein, putative, Ty3-gy... 33 9.9
>tr|A5C358|A5C358_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001629 PE=4 SV=1 Length = 235
Score = 36.6 bits (83), Expect = 0.89 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = -1
Query: 510 EIKQAVKERYLPPAHEVLKMNEFFSLKQYRLSLEEYYSKF 391 E+K +KE +LP +E L + FSLKQ S+EEY +F Sbjct: 171 EMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEF 210
>tr|A5BWT5|A5BWT5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004909 PE=4 SV=1 Length = 895
Score = 36.6 bits (83), Expect = 0.89 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = -1
Query: 510 EIKQAVKERYLPPAHEVLKMNEFFSLKQYRLSLEEYYSKF 391 E+K +KE +LP +E L + FSLKQ S+EEY +F Sbjct: 42 EMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEF 81
>tr|A5BU14|A5BU14_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018984 PE=4 SV=1 Length = 1521
Score = 36.6 bits (83), Expect = 0.89 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = -1
Query: 510 EIKQAVKERYLPPAHEVLKMNEFFSLKQYRLSLEEYYSKF 391 E+K +KE +LP +E L + FSLKQ S+EEY +F Sbjct: 161 EMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEF 200
>tr|A5AVS3|A5AVS3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043198 PE=4 SV=1 Length = 1499
Score = 36.6 bits (83), Expect = 0.89 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = -1
Query: 510 EIKQAVKERYLPPAHEVLKMNEFFSLKQYRLSLEEYYSKF 391 E+K +KE +LP +E L + FSLKQ S+EEY +F Sbjct: 171 EMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEF 210
>tr|A5ACJ6|A5ACJ6_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029384 PE=4 SV=1 Length = 1392
Score = 36.6 bits (83), Expect = 0.89 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = -1
Query: 510 EIKQAVKERYLPPAHEVLKMNEFFSLKQYRLSLEEYYSKF 391 E+K +KE +LP +E L + FSLKQ S+EEY +F Sbjct: 171 EMKLKMKEHFLPTDYEQLMYTKLFSLKQGTKSVEEYTEEF 210
>tr|Q65352|Q65352_NPVAC ORF A span 522-1895 OS=Autographa californica nuclear polyhedrosis virus PE=4 SV=1 Length = 410
Score = 35.0 bits (79), Expect = 2.6 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 8/43 (18%) Frame = +1
Query: 130 PTTIEQK--------IARLCQGLREPISSRLEAMKPTTVQDAL 234 PTTIE K + +GL+EP+ SR+ M+P T++ AL Sbjct: 137 PTTIEAKRALYKKVTVQAFVRGLKEPLGSRIRCMRPETIEKAL 179
>tr|Q0ZLH4|Q0ZLH4_9ORYZ Polyprotein OS=Oryza australiensis PE=4 SV=1 Length = 1469
Score = 35.0 bits (79), Expect = 2.6 Identities = 17/44 (38%), Positives = 25/44 (56%) Frame = -1
Query: 522 PELREIKQAVKERYLPPAHEVLKMNEFFSLKQYRLSLEEYYSKF 391 P E A +E ++P A +K NEF L+Q S++EY +KF Sbjct: 119 PTWEEFTAAFRENFVPAAVMRMKKNEFRRLRQGNTSVQEYLNKF 162
>tr|A5B9I7|A5B9I7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_012932 PE=4 SV=1 Length = 1027
Score = 34.7 bits (78), Expect = 3.4 Identities = 17/39 (43%), Positives = 24/39 (61%) Frame = -1
Query: 507 IKQAVKERYLPPAHEVLKMNEFFSLKQYRLSLEEYYSKF 391 +K +KE +LP +E L + FSLKQ S+EEY +F Sbjct: 1 MKLKMKEHFLPSHYEQLMYTKLFSLKQGTKSVEEYTEEF 39
>tr|Q7XKY8|Q7XKY8_ORYSJ OSJNBa0022F16.16 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0022F16.16 PE=4 SV=1 Length = 1402
Score = 33.9 bits (76), Expect = 5.8 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -1
Query: 105 CSECGELGHY*NRCPHLTNRAATT 34 C CGE GH+ N+CPHL T Sbjct: 226 CFNCGEYGHFANKCPHLNKTPIRT 249
>tr|Q75H43|Q75H43_ORYSJ Putative uncharacterized protein OSJNBa0006O14.10 (Putative uncharacterized protein OSJNBa0010H19.3) OS=Oryza sativa subsp. japonica GN=OSJNBa0006O14.10 PE=4 SV=1 Length = 214
Score = 33.9 bits (76), Expect = 5.8 Identities = 15/35 (42%), Positives = 22/35 (62%) Frame = -1
Query: 114 DV*CSECGELGHY*NRCPHLTNRAATTY*SISKTP 10 D+ C C E+GH+ ++CP N AA+T S+ TP Sbjct: 47 DICCFSCQEMGHFADKCPKPRNMAAST--SVHATP 79
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