BP914033
Clone id YMU001_000039_B04
Library
Length 449
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TCCTATTGTCCTCTGATGGTGGTGGACGGGCTGCCCTTTCTGGCTCTTTGCCGTGCTCTA
TTTGCTGCTCTTGAGTAGATTCAACTGCCTGGTGTGATGATTCCATTGCTTATTGCTGTG
CAGGATCTGCTTCTTTTGTTGGCTCAGTTGTTGTGGTTCTAATTGCTGGTGATGATGGTG
GGCTCGGCATGAGGTGATCATGGTGTTCAAAAACAAGAGAAAATATGCGGAGAGATACAT
CACCTTGAGCATGTTGTGCTCCTCCTTGTGCAGTGGCTTCCTCTGCTTGCTTTTGATGTG
CTATCACCTCTTTAGCTTTCCTTTGCCGCTTCTTGTGCTTCCATCAGCTTCAAGGATTTT
ACTTCTTGATACACTTGTTCCATTAATGTGATGGGATCTTCAGCTTGTTTCCTAGTATGA
TGCTTTGTTCTTGCACCTTTAATCTCAGT
■■Homology search results ■■ -
sp_hit_id Q6GJZ6
Definition sp|Q6GJZ6|LIP2_STAAR Lipase 2 OS=Staphylococcus aureus (strain MRSA252)
Align length 58
Score (bit) 30.8
E-value 2.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914033|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_B04.
(449 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6GJZ6|LIP2_STAAR Lipase 2 OS=Staphylococcus aureus (strain M... 31 2.8
sp|Q5ZIW7|ATG4A_CHICK Cysteine protease ATG4A OS=Gallus gallus G... 30 3.6
sp|Q31GB2|SYE_THICR Glutamyl-tRNA synthetase OS=Thiomicrospira c... 30 6.1
sp|Q9BVN2|RUSC1_HUMAN RUN and SH3 domain-containing protein 1 OS... 29 8.0
sp|P58391|KCNN3_MOUSE Small conductance calcium-activated potass... 29 8.0

>sp|Q6GJZ6|LIP2_STAAR Lipase 2 OS=Staphylococcus aureus (strain
MRSA252) GN=lip2 PE=3 SV=1
Length = 691

Score = 30.8 bits (68), Expect = 2.8
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Frame = -2

Query: 214 VFEHHDHLMPSPPSSPAIRTTTTEPTKEAD------PAQQ*AMESSHQAVESTQEQQI 59
V +HD P+ + P+ T + TKE D P QQ + +HQ +++ Q+ +
Sbjct: 177 VIPNHDKAAPTSTTPPSNDKTAPKSTKEQDATTDKHPNQQDTHQPAHQIIDAKQDDNV 234


>sp|Q5ZIW7|ATG4A_CHICK Cysteine protease ATG4A OS=Gallus gallus
GN=ATG4A PE=2 SV=1
Length = 380

Score = 30.4 bits (67), Expect = 3.6
Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -2

Query: 235 SLRIFSLVFEHHDHLMP-SPPSSPAIRTTTTEPTKEAD 125
SLR+F LV +H H P PP+ P + TT E + D
Sbjct: 329 SLRMFELVQKHPPHWPPFIPPTKPEVTTTGAELIESTD 366


>sp|Q31GB2|SYE_THICR Glutamyl-tRNA synthetase OS=Thiomicrospira
crunogena (strain XCL-2) GN=gltX PE=3 SV=1
Length = 470

Score = 29.6 bits (65), Expect = 6.1
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = -1

Query: 449 TEIKGARTKHHTRKQAEDPITLMEQVYQEVKSLKLMEAQEAAKES 315
TE + K H R AE+P+ L+++ + E+ K + EA ++
Sbjct: 368 TEFEAGAAKKHLRPVAEEPLRLVQKKFAELTEWKADKIHEAVHQA 412


>sp|Q9BVN2|RUSC1_HUMAN RUN and SH3 domain-containing protein 1
OS=Homo sapiens GN=RUSC1 PE=1 SV=3
Length = 902

Score = 29.3 bits (64), Expect = 8.0
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2

Query: 217 LVFEHHDHLMPSPPSSPA 164
L+FEHH HL PP +PA
Sbjct: 663 LLFEHHHHLPLGPPQAPA 680


>sp|P58391|KCNN3_MOUSE Small conductance calcium-activated potassium
channel protein 3 OS=Mus musculus GN=Kcnn3 PE=2 SV=1
Length = 731

Score = 29.3 bits (64), Expect = 8.0
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -2

Query: 187 PSPPSSPAIRTTTTEPTKEADPAQQ*AMESSHQAVESTQEQQ 62
P PP+ PA+ P + P Q +S Q + +Q+QQ
Sbjct: 37 PPPPAPPAVPQQPPGPLLQPQPPQPQQQQSQQQQQQQSQQQQ 78


tr_hit_id A4T3L8
Definition tr|A4T3L8|A4T3L8_MYCGI Putative outer membrane adhesin like protein OS=Mycobacterium gilvum (strain PYR-GCK)
Align length 40
Score (bit) 33.1
E-value 7.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914033|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_B04.
(449 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A4T3L8|A4T3L8_MYCGI Putative outer membrane adhesin like prot... 33 7.2
tr|Q16LW7|Q16LW7_AEDAE Putative uncharacterized protein OS=Aedes... 33 7.2
tr|A9A3G2|A9A3G2_NITMS Putative uncharacterized protein OS=Nitro... 33 7.2
tr|B6P6B5|B6P6B5_BRAFL Putative uncharacterized protein (Fragmen... 33 9.4
tr|B4L5E2|B4L5E2_DROMO GI21535 OS=Drosophila mojavensis GN=GI215... 33 9.4
tr|A1C9S8|A1C9S8_ASPCL Protein kinase (Chm1), putative OS=Asperg... 33 9.4

>tr|A4T3L8|A4T3L8_MYCGI Putative outer membrane adhesin like protein
OS=Mycobacterium gilvum (strain PYR-GCK) GN=Mflv_0506
PE=3 SV=1
Length = 2816

Score = 33.1 bits (74), Expect = 7.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -2

Query: 187 PSPPSSPAIRTTTTEPTKEADPAQQ*AMESSHQAVESTQE 68
P PP+ P + TT E + DPA+ A + H ST E
Sbjct: 110 PEPPADPVVEDTTDEALADPDPAESLAPSTLHPESGSTPE 149


>tr|Q16LW7|Q16LW7_AEDAE Putative uncharacterized protein OS=Aedes
aegypti GN=AAEL012501 PE=4 SV=1
Length = 339

Score = 33.1 bits (74), Expect = 7.2
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = -2

Query: 193 LMPSPPSSPAIRTTTTEPTKEADPAQQ*AMESSHQAVESTQEQQIEH 53
++P S A TTTT EA PA+Q +E+ HQ ++ Q +H
Sbjct: 176 ILPMNQESQAQETTTTYEIIEATPAKQPRIEAIHQITPASAAQHTQH 222


>tr|A9A3G2|A9A3G2_NITMS Putative uncharacterized protein
OS=Nitrosopumilus maritimus (strain SCM1) GN=Nmar_0998
PE=4 SV=1
Length = 513

Score = 33.1 bits (74), Expect = 7.2
Identities = 13/45 (28%), Positives = 29/45 (64%)
Frame = -2

Query: 187 PSPPSSPAIRTTTTEPTKEADPAQQ*AMESSHQAVESTQEQQIEH 53
P+ PS+P +T TEP+ AQ+ A+ + A+++ Q++++++
Sbjct: 331 PTEPSTPTEPSTPTEPSTPLTKAQKKALNQLNNAIKNEQKREVQY 375


>tr|B6P6B5|B6P6B5_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_286261 PE=4 SV=1
Length = 1639

Score = 32.7 bits (73), Expect = 9.4
Identities = 17/46 (36%), Positives = 23/46 (50%)
Frame = -2

Query: 202 HDHLMPSPPSSPAIRTTTTEPTKEADPAQQ*AMESSHQAVESTQEQ 65
HD + P PPS P IRT T T++ D + SS ++ T Q
Sbjct: 120 HDDIPPPPPSQPQIRTQTRSGTRDRDRDRDTDSVSSQPSLTVTIRQ 165


>tr|B4L5E2|B4L5E2_DROMO GI21535 OS=Drosophila mojavensis GN=GI21535
PE=4 SV=1
Length = 3796

Score = 32.7 bits (73), Expect = 9.4
Identities = 15/49 (30%), Positives = 23/49 (46%)
Frame = -2

Query: 193 LMPSPPSSPAIRTTTTEPTKEADPAQQ*AMESSHQAVESTQEQQIEHGK 47
LMP+PP++PA T T P P ++ A Q+Q ++ K
Sbjct: 1214 LMPTPPTTPAPAATATAPAATVTPTAATTAATTTVAASKQQQQPVKRSK 1262


>tr|A1C9S8|A1C9S8_ASPCL Protein kinase (Chm1), putative
OS=Aspergillus clavatus GN=ACLA_009160 PE=4 SV=1
Length = 841

Score = 32.7 bits (73), Expect = 9.4
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -2

Query: 181 PPSSPAIRTTT--TEPTKEAD--PAQQ*AMESSHQAVESTQEQQIEHGKXXXXXXXXXPS 14
PP +PA R + T+ T+ A+ PA + S +A E Q+QQ+E K
Sbjct: 291 PPPAPAQRLDSGPTQATRSANSSPAHSQSKAESDRAFEQQQQQQLERMKEVAEQERRRVE 350

Query: 13 EDNR 2
EDNR
Sbjct: 351 EDNR 354