BP914051 |
Clone id |
YMU001_000039_C11 |
Library |
YMU01 |
Length |
443 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000039_C11. |
Accession |
BP914051 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AAGAAATTAGGTCAGTATACAGAAAACTTGTAAATCATACGGCCTTACACAGCTTCTTCT CTTATGTTATGCTACAGTCATTGCTTTAGAAGACAACCTCTGGCGCACTCAAAATCCTTG CGAGGGAAAACTGAGCATGGAAACTTGCAGTCTGGTTTGCATAAGCTACATTTGGTCATG GGAAAACTCACGTGAGATGATGTCCAAAATCGATGTAATCAGGAATCCTTCCGATCTGTA CGCTCAGCAAGGAGCTGCTTTCTTCTCTCTAGTTCCTCCATTTCTTTATTGCTGGGAGTC CAAAACCATTGTTGAAGATTGTTCAGGGACCTTTTCAGTGCAGTTTGAACGTTCTCGCCT GGACCGTAATCAGCGGTGATGGCAAGATACGCCACGACGGCTGTGCATACCCACGTCGTT CGCTTCACCAGCAAGTCCTTTCG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A1KGL2 |
Definition |
sp|A1KGL2|Y781_MYCBP Putative S-adenosyl-L-methionine-dependent methyltransferase BCG_0781c OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) |
Align length |
75 |
Score (bit) |
32.0 |
E-value |
1.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914051|Adiantum capillus-veneris mRNA, clone: YMU001_000039_C11. (443 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|A1KGL2|Y781_MYCBP Putative S-adenosyl-L-methionine-dependent ... 32 1.2 sp|Q7D9D6|Y756_MYCTU Putative S-adenosyl-L-methionine-dependent ... 32 1.2 sp|O53795|Y752_MYCBO Putative S-adenosyl-L-methionine-dependent ... 32 1.2 sp|A5U0B7|Y739_MYCTA Putative S-adenosyl-L-methionine-dependent ... 32 1.2 sp|P32893|KRE11_YEAST Beta-glucan synthesis-associated protein K... 32 1.2 sp|P04731|MT1A_HUMAN Metallothionein-1A OS=Homo sapiens GN=MT1A ... 31 2.6 sp|A2CDS6|DNLJ_PROM3 DNA ligase OS=Prochlorococcus marinus (stra... 30 3.4 sp|Q5R5J7|TBCC_PONAB Tubulin-specific chaperone C OS=Pongo abeli... 30 4.5 sp|Q15814|TBCC_HUMAN Tubulin-specific chaperone C OS=Homo sapien... 30 4.5 sp|P80292|MT2E_RABIT Metallothionein-2E OS=Oryctolagus cuniculus... 30 4.5 sp|P80291|MT2D_RABIT Metallothionein-2D OS=Oryctolagus cuniculus... 30 4.5 sp|P80289|MT2B_RABIT Metallothionein-2B OS=Oryctolagus cuniculus... 30 4.5 sp|P11957|MT1A_RABIT Metallothionein-1A OS=Oryctolagus cuniculus... 30 4.5 sp|P51834|SMC_BACSU Chromosome partition protein smc OS=Bacillus... 30 5.9 sp|Q5C6R9|SJ381_SCHJA UPF0506 protein SJCHGC02381 OS=Schistosoma... 30 5.9 sp|P80290|MT2C_RABIT Metallothionein-2C OS=Oryctolagus cuniculus... 30 5.9 sp|P18055|MT2A_RABIT Metallothionein-2A OS=Oryctolagus cuniculus... 30 5.9 sp|Q9BQN2|MT1P3_HUMAN Putative metallothionein MT1P3 OS=Homo sap... 30 5.9 sp|Q93083|MT1L_HUMAN Metallothionein-1L OS=Homo sapiens GN=MT1L ... 30 5.9 sp|P80294|MT1H_HUMAN Metallothionein-1H OS=Homo sapiens GN=MT1H ... 30 5.9 sp|O18842|MT_BALMY Metallothionein OS=Balaena mysticetus PE=3 SV=1 29 7.7 sp|P14425|MT2_STECO Metallothionein-2 OS=Stenella coeruleoalba G... 29 7.7 sp|Q5NVS0|MT2_PONAB Metallothionein-2 OS=Pongo abelii GN=MT2 PE=... 29 7.7 sp|P68303|MT2_MACFA Metallothionein-2 OS=Macaca fascicularis GN=... 29 7.7 sp|P02795|MT2_HUMAN Metallothionein-2 OS=Homo sapiens GN=MT2A PE... 29 7.7 sp|P68304|MT2_CERAE Metallothionein-2 OS=Cercopithecus aethiops ... 29 7.7 sp|P55943|MT2H_BOVIN Metallothionein-II, hippocampal OS=Bos taur... 29 7.7 sp|P79379|MT2A_PIG Metallothionein-2A OS=Sus scrofa GN=MT2A PE=3... 29 7.7 sp|P15786|MT1_COLLI Metallothionein-1 OS=Columba livia PE=1 SV=1 29 7.7 sp|O19000|MT1_CANFA Metallothionein-1 OS=Canis familiaris GN=MT1... 29 7.7
>sp|A1KGL2|Y781_MYCBP Putative S-adenosyl-L-methionine-dependent methyltransferase BCG_0781c OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=BCG_0781c PE=3 SV=1 Length = 318
Score = 32.0 bits (71), Expect = 1.2 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Frame = -1
Query: 425 KRTTWVCTAVVAYLA----------ITADYGPGENVQTALKRSLNNLQQWFWTPSNKEME 276 +RT W+ ++ YL+ ITA PG T + R +N L + E Sbjct: 182 QRTAWIAEGLLGYLSAEAQDRLLDQITAQSVPGSQFATEVLRDINRLNE----------E 231
Query: 275 ELERRKQLLAERTDR 231 EL R + LAER R Sbjct: 232 ELRGRMRRLAERFRR 246
>sp|Q7D9D6|Y756_MYCTU Putative S-adenosyl-L-methionine-dependent methyltransferase Rv0731c/MT0756 OS=Mycobacterium tuberculosis GN=Rv0731c PE=3 SV=1 Length = 318
Score = 32.0 bits (71), Expect = 1.2 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Frame = -1
Query: 425 KRTTWVCTAVVAYLA----------ITADYGPGENVQTALKRSLNNLQQWFWTPSNKEME 276 +RT W+ ++ YL+ ITA PG T + R +N L + E Sbjct: 182 QRTAWIAEGLLGYLSAEAQDRLLDQITAQSVPGSQFATEVLRDINRLNE----------E 231
Query: 275 ELERRKQLLAERTDR 231 EL R + LAER R Sbjct: 232 ELRGRMRRLAERFRR 246
>sp|O53795|Y752_MYCBO Putative S-adenosyl-L-methionine-dependent methyltransferase Mb0752c OS=Mycobacterium bovis GN=Mb0752c PE=3 SV=1 Length = 318
Score = 32.0 bits (71), Expect = 1.2 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Frame = -1
Query: 425 KRTTWVCTAVVAYLA----------ITADYGPGENVQTALKRSLNNLQQWFWTPSNKEME 276 +RT W+ ++ YL+ ITA PG T + R +N L + E Sbjct: 182 QRTAWIAEGLLGYLSAEAQDRLLDQITAQSVPGSQFATEVLRDINRLNE----------E 231
Query: 275 ELERRKQLLAERTDR 231 EL R + LAER R Sbjct: 232 ELRGRMRRLAERFRR 246
>sp|A5U0B7|Y739_MYCTA Putative S-adenosyl-L-methionine-dependent methyltransferase MRA_0739 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=MRA_0739 PE=3 SV=1 Length = 318
Score = 32.0 bits (71), Expect = 1.2 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 10/75 (13%) Frame = -1
Query: 425 KRTTWVCTAVVAYLA----------ITADYGPGENVQTALKRSLNNLQQWFWTPSNKEME 276 +RT W+ ++ YL+ ITA PG T + R +N L + E Sbjct: 182 QRTAWIAEGLLGYLSAEAQDRLLDQITAQSVPGSQFATEVLRDINRLNE----------E 231
Query: 275 ELERRKQLLAERTDR 231 EL R + LAER R Sbjct: 232 ELRGRMRRLAERFRR 246
>sp|P32893|KRE11_YEAST Beta-glucan synthesis-associated protein KRE11 OS=Saccharomyces cerevisiae GN=KRE11 PE=1 SV=1 Length = 560
Score = 32.0 bits (71), Expect = 1.2 Identities = 23/111 (20%), Positives = 50/111 (45%), Gaps = 8/111 (7%) Frame = +2
Query: 68 YATVIALEDNLWRTQNPCEGKLSMETCSLV------CISYIWSWENSREMMSKIDVIRNP 229 Y T + +NLWR +N C K+ ++ ++ I +++ +++ + D +++P Sbjct: 74 YFTQVENNENLWRLKNDCCSKILFKSNVVMNNGYNNQIKFVFEYKSVDANFNNQDSLQDP 133
Query: 230 SDLYAQQGAAFFSLVPPF--LYCWESKTIVEDCSGTFSVQFERSRLDRNQR 376 Y + ++P F +Y W S + T S + + L++N R Sbjct: 134 QAKYTLDKYSSEEILPSFEPVYSWSS-------AATKSSKNTNNHLEKNNR 177
>sp|P04731|MT1A_HUMAN Metallothionein-1A OS=Homo sapiens GN=MT1A PE=1 SV=1 Length = 61
Score = 30.8 bits (68), Expect = 2.6 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1
Query: 173 KCSLCKPDCKFPCSVFPRKDFECARGCLLK 84 KC+ CK C CS P +CA+GC+ K Sbjct: 25 KCNSCKKSC---CSCCPMSCAKCAQGCICK 51
>sp|A2CDS6|DNLJ_PROM3 DNA ligase OS=Prochlorococcus marinus (strain MIT 9303) GN=ligA PE=3 SV=1 Length = 696
Score = 30.4 bits (67), Expect = 3.4 Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 8/59 (13%) Frame = -1
Query: 380 ITADYGPGENVQTALKRSLNNLQQWFWTPSNKEM--------EELERRKQLLAERTDRK 228 IT+ +G G + +LQQWF TP+N+E+ LE + LA TD+K Sbjct: 566 ITSVFGVGNEIA-------QSLQQWFATPANQELLAKLKQLGISLEANEDELAHDTDQK 617
>sp|Q5R5J7|TBCC_PONAB Tubulin-specific chaperone C OS=Pongo abelii GN=TBCC PE=2 SV=1 Length = 346
Score = 30.0 bits (66), Expect = 4.5 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 11/55 (20%) Frame = +2
Query: 299 SKTIVEDCSG------TFSV-----QFERSRLDRNQR*WQDTPRRLCIPTSFASP 430 S+ IVEDCSG T+S FE S LDR++ W D + ASP Sbjct: 277 SRAIVEDCSGIQFAPYTWSYPEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASP 331
>sp|Q15814|TBCC_HUMAN Tubulin-specific chaperone C OS=Homo sapiens GN=TBCC PE=1 SV=1 Length = 346
Score = 30.0 bits (66), Expect = 4.5 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 11/55 (20%) Frame = +2
Query: 299 SKTIVEDCSG------TFSV-----QFERSRLDRNQR*WQDTPRRLCIPTSFASP 430 S+ IVEDCSG T+S FE S LDR++ W D + ASP Sbjct: 277 SRAIVEDCSGIQFAPYTWSYPEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASP 331
>sp|P80292|MT2E_RABIT Metallothionein-2E OS=Oryctolagus cuniculus PE=1 SV=1 Length = 61
Score = 30.0 bits (66), Expect = 4.5 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1
Query: 173 KCSLCKPDCKFPCSVFPRKDFECARGCLLK 84 KC+ CK C CS P +CA+GC+ K Sbjct: 25 KCTSCKKSC---CSCCPAGCTKCAQGCICK 51
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6DYB5 |
Definition |
tr|Q6DYB5|Q6DYB5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana |
Align length |
55 |
Score (bit) |
43.5 |
E-value |
0.005 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914051|Adiantum capillus-veneris mRNA, clone: YMU001_000039_C11. (443 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6DYB5|Q6DYB5_ARATH Putative uncharacterized protein OS=Arabi... 44 0.005 tr|A7PZD2|A7PZD2_VITVI Chromosome chr15 scaffold_40, whole genom... 41 0.034 tr|Q9LQ84|Q9LQ84_ARATH T1N6.13 protein (Putative uncharacterized... 37 0.63 tr|Q94I57|Q94I57_ORYSJ Putative uncharacterized protein OSJNBa00... 36 0.83 tr|Q55BN2|Q55BN2_DICDI Putative uncharacterized protein OS=Dicty... 35 1.4 tr|A9L3U9|A9L3U9_SHEB9 Peptidase S9 prolyl oligopeptidase active... 34 3.1 tr|A6WSU2|A6WSU2_SHEB8 Peptidase S9 prolyl oligopeptidase active... 34 3.1 tr|A3D034|A3D034_SHEB5 Peptidase S9, prolyl oligopeptidase activ... 34 3.1 tr|B8EBC7|B8EBC7_9GAMM Peptidase S9 prolyl oligopeptidase active... 34 3.1 tr|A8ABS3|A8ABS3_IGNH4 Preprotein translocase secY subunit OS=Ig... 34 3.1 tr|Q0HMM9|Q0HMM9_SHESM Peptidase S9, prolyl oligopeptidase activ... 34 4.1 tr|A0KSS7|A0KSS7_SHESA Peptidase S9, prolyl oligopeptidase activ... 33 5.4 tr|B8CPR1|B8CPR1_9GAMM Sulfate transporter/antisigma-factor anta... 33 5.4 tr|Q8ILE7|Q8ILE7_PLAF7 Ecto-nucleoside triphosphate diphosphohyd... 33 5.4 tr|Q0HR52|Q0HR52_SHESR Peptidase S9, prolyl oligopeptidase activ... 33 7.0 tr|B4UWA6|B4UWA6_ARAHY Putative uncharacterized protein (Fragmen... 33 7.0 tr|B8BCR8|B8BCR8_ORYSI Putative uncharacterized protein OS=Oryza... 33 9.2 tr|A3BZX6|A3BZX6_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.2
>tr|Q6DYB5|Q6DYB5_ARATH Putative uncharacterized protein OS=Arabidopsis thaliana GN=At4G00530 PE=4 SV=1 Length = 71
Score = 43.5 bits (101), Expect = 0.005 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 4/55 (7%) Frame = -1
Query: 437 DLLVKRTTWVCTAVVAYLAITADYGPGENVQTALKRSL----NNLQQWFWTPSNK 285 D +V+RTT V TAV +Y +T DYGP NV +KR + ++++Q+ + P + Sbjct: 6 DKVVRRTTMVATAVASYFLLTGDYGPEPNVLDPIKRKILAAQDSVKQFIFGPKGE 60
>tr|A7PZD2|A7PZD2_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026837001 PE=4 SV=1 Length = 64
Score = 40.8 bits (94), Expect = 0.034 Identities = 18/45 (40%), Positives = 28/45 (62%) Frame = -1
Query: 443 RKDLLVKRTTWVCTAVVAYLAITADYGPGENVQTALKRSLNNLQQ 309 R D LV+RTT V TA +Y +TADYG N +K ++++ ++ Sbjct: 4 RTDKLVRRTTMVATATASYFLLTADYGAEPNALDPIKNAIHSAER 48
>tr|Q9LQ84|Q9LQ84_ARATH T1N6.13 protein (Putative uncharacterized protein) (Putative uncharacterized protein At1g01725) OS=Arabidopsis thaliana GN=At1g01725 PE=2 SV=1 Length = 62
Score = 36.6 bits (83), Expect = 0.63 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 3/52 (5%) Frame = -1
Query: 431 LVKRTTWVCTAVVAYLAITADYGPGENVQTALKRSLNNLQ---QWFWTPSNK 285 +VK T+ V TAVV+Y +TADYGP N +++ + + Q + F PS K Sbjct: 8 VVKVTSVVATAVVSYFLLTADYGPEPNALDPIRQRILSAQDSVKEFIFPSKK 59
>tr|Q94I57|Q94I57_ORYSJ Putative uncharacterized protein OSJNBa0084C09.15 OS=Oryza sativa subsp. japonica GN=OSJNBa0084C09.15 PE=4 SV=1 Length = 263
Score = 36.2 bits (82), Expect = 0.83 Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 1/68 (1%) Frame = -1
Query: 293 SNKEMEELERRKQLLAERTDRKDS*LHRFWTS-SHVSFPMTKCSLCKPDCKFPCSVFPRK 117 S+ E+ L + K L + + D R T+ + F +T CS C P C F CS P Sbjct: 60 SSSEVRLLFQHKVRLHQEGNATDETKSRMSTNLTFFCFHLTSCSFCNPRC-FECSPSPAA 118
Query: 116 DFECARGC 93 +CA+ C Sbjct: 119 SGQCAKAC 126
>tr|Q55BN2|Q55BN2_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum GN=DDB_0191056 PE=4 SV=1 Length = 954
Score = 35.4 bits (80), Expect = 1.4 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = -1
Query: 218 LHRFWTSSHVSFPMTKCSLCKPDCKFPC 135 L + WTSS +SF KC+LC + + PC Sbjct: 746 LKKRWTSSRISFGFVKCALCSQNMQHPC 773
>tr|A9L3U9|A9L3U9_SHEB9 Peptidase S9 prolyl oligopeptidase active site domain protein OS=Shewanella baltica (strain OS195) GN=Sbal195_3883 PE=3 SV=1 Length = 826
Score = 34.3 bits (77), Expect = 3.1 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -1
Query: 437 DLLVKRTTWVCTAVVAYLAITADYGPGENVQ-TALKRSLNNLQQWFWTPSNKEMEELERR 261 D+ ++ T V+A + GE Q T R + +Q W WT S + E E + Sbjct: 327 DITIEGLTGFDEDVLAKVKAENAKAKGETYQSTKAPRKIQLIQDWGWTQSAIQWHESEDK 386
Query: 260 KQLLAERTDRKD 225 L+ E TD KD Sbjct: 387 LALMLEATDNKD 398
>tr|A6WSU2|A6WSU2_SHEB8 Peptidase S9 prolyl oligopeptidase active site domain protein OS=Shewanella baltica (strain OS185) GN=Shew185_3757 PE=3 SV=1 Length = 826
Score = 34.3 bits (77), Expect = 3.1 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -1
Query: 437 DLLVKRTTWVCTAVVAYLAITADYGPGENVQ-TALKRSLNNLQQWFWTPSNKEMEELERR 261 D+ ++ T V+A + GE Q T R + +Q W WT S + E E + Sbjct: 327 DITIEGLTGFDEDVLAKVKAENAKAKGETYQSTKAPRKIQLMQDWGWTQSAIQWHESEDK 386
Query: 260 KQLLAERTDRKD 225 L+ E TD KD Sbjct: 387 LALMLEATDNKD 398
>tr|A3D034|A3D034_SHEB5 Peptidase S9, prolyl oligopeptidase active site domain protein OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=Sbal_0568 PE=3 SV=1 Length = 823
Score = 34.3 bits (77), Expect = 3.1 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -1
Query: 437 DLLVKRTTWVCTAVVAYLAITADYGPGENVQ-TALKRSLNNLQQWFWTPSNKEMEELERR 261 D+ ++ T V+A + GE Q T R + +Q W WT S + E E + Sbjct: 327 DITIEGLTGFDEDVLAKVKAENAKAKGETYQSTKAPRKIQLMQDWGWTQSAIQWHESEDK 386
Query: 260 KQLLAERTDRKD 225 L+ E TD KD Sbjct: 387 LALMLEATDNKD 398
>tr|B8EBC7|B8EBC7_9GAMM Peptidase S9 prolyl oligopeptidase active site domain protein OS=Shewanella baltica OS223 GN=Sbal223_3700 PE=3 SV=1 Length = 826
Score = 34.3 bits (77), Expect = 3.1 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -1
Query: 437 DLLVKRTTWVCTAVVAYLAITADYGPGENVQ-TALKRSLNNLQQWFWTPSNKEMEELERR 261 D+ ++ T V+A + GE Q T R + +Q W WT S + E E + Sbjct: 327 DITIEGLTGFDEDVLAKVKAENAKAKGETYQSTKAPRKIQLIQDWGWTQSAIQWHESEDK 386
Query: 260 KQLLAERTDRKD 225 L+ E TD KD Sbjct: 387 LALMLEATDNKD 398
>tr|A8ABS3|A8ABS3_IGNH4 Preprotein translocase secY subunit OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_1199 PE=3 SV=1 Length = 479
Score = 34.3 bits (77), Expect = 3.1 Identities = 19/43 (44%), Positives = 25/43 (58%) Frame = -1
Query: 443 RKDLLVKRTTWVCTAVVAYLAITADYGPGENVQTALKRSLNNL 315 RK L KR TW A+VAYL ++ PG +VQT+ L N+ Sbjct: 27 RKINLYKRLTWTALALVAYLMMSNIPLPGVSVQTSFNLLLMNI 69
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