BP914058
Clone id YMU001_000039_D06
Library
Length 154
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGCATTGGGAAGATCAGGAGATTCTCTAGGGAATCTTCGGTTATATGCTTCTGTTGGGCT
GTCAGCGTAAAGATAATCGGGGTAACTTGGTCTGCACTCCTCAAGAGGGATGTTGGCATG
TGGGTGATCACTCTGAGAAGACCTTATATGTGGG
■■Homology search results ■■ -
sp_hit_id Q9CAR4
Definition sp|Q9CAR4|WRK36_ARATH Probable WRKY transcription factor 36 OS=Arabidopsis thaliana
Align length 48
Score (bit) 28.9
E-value 8.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914058|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_D06.
(154 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9CAR4|WRK36_ARATH Probable WRKY transcription factor 36 OS=A... 29 8.5
sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditi... 29 8.5

>sp|Q9CAR4|WRK36_ARATH Probable WRKY transcription factor 36
OS=Arabidopsis thaliana GN=WRKY36 PE=2 SV=1
Length = 387

Score = 28.9 bits (63), Expect = 8.5
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = -2

Query: 150 HIRSSQSDHPHANIPLEECRPSYPDYLYADSPTEAYNRRFPRESPDLP 7
H S + + H + L+ RP+YP+ L D P + + SPD P
Sbjct: 303 HHFSISTTNSHPTVTLDLTRPNYPNQLPDDYPLSSSSFSLNFSSPDPP 350


>sp|Q21313|EPI1_CAEEL Laminin-like protein epi-1 OS=Caenorhabditis
elegans GN=epi-1 PE=1 SV=1
Length = 3672

Score = 28.9 bits (63), Expect = 8.5
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 6/31 (19%)
Frame = +3

Query: 36 FGYMLLLGCQR------KDNRGNLVCTPQEG 110
FGY L+GCQ+ GNLVC P+ G
Sbjct: 1495 FGYDPLIGCQKCGCHPQGSEGGNLVCDPESG 1525


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914058|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_D06.
(154 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******