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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914072
Clone id YMU001_000039_E08
Library
Length 540
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTGATAAAGATAATTAAGGAAATCTAAATCCCAATGCCAGCATGGTGGCCA
TGACAGTTCCAAGAATGCCAGGTCCAAGCAACCCTGCAGACCTGTAAGCGGGCAATCTTC
GCACACTGAGATGTACAGCAAGCATGGCAATGCTCCCGATAGGCACATACATGGCCAAAC
GATGCTCAGCGGATGTGACTGCCATGTCCCTAAAGAGACAACATGCAAACTCATGAAACT
CTGCTAGGGTTAAAAACTGCTTGCCTGAGGGGGCAAACCCGCCATCTCTGAGGATGAGAT
CCACATCTGCTTGAGTGGGGGGAGAAGGAAGCCATCGCTGCTTGAGAAGAAAAGCTGGGT
CGTCTGCGTGGTCTGCAGGAGAGGAGATGAGATCATAGATGCGCCGGCTTGCATCGCAGA
GCTGGTAAAGGAAGACTCCTGCTGCTGTGTGGTGGGATATGGCGATGCACTCTTCAAAGC
TGGTGCAGACTGCTGCTTGAAACCGCGTCGACTCCCTCAGCTTCTTCTCCACCTTCTGAG
■■Homology search results ■■ -
sp_hit_id Q00192
Definition sp|Q00192|TRAI5_ECOLX Protein traI OS=Escherichia coli
Align length 41
Score (bit) 30.0
E-value 7.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914072|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_E08.
         (529 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00192|TRAI5_ECOLX Protein traI OS=Escherichia coli GN=traI P...    30   7.1  
sp|Q8N157|AHI1_HUMAN Jouberin OS=Homo sapiens GN=AHI1 PE=1 SV=1        30   9.2  
sp|Q9QYC1|PCX1_MOUSE Pecanex-like protein 1 OS=Mus musculus GN=P...    30   9.4  
sp|P84770|IRS1B_XENLA Insulin receptor substrate 1-B OS=Xenopus ...    30   9.4  
sp|Q91615|IRS1A_XENLA Insulin receptor substrate 1-A OS=Xenopus ...    30   9.4  

>sp|Q00192|TRAI5_ECOLX Protein traI OS=Escherichia coli GN=traI PE=4
           SV=1
          Length = 747

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 13/41 (31%), Positives = 23/41 (56%)
 Frame = +3

Query: 24  KSQCQHGGHDSSKNARSKQPCRPVSGQSSHTEMYSKHGNAP 146
           K + QHGG D+    R+++  + + G +   E  +K G+AP
Sbjct: 379 KKEAQHGGADALAALRAREAAQGLKGNTIRGEGQAKPGHAP 419


>sp|Q8N157|AHI1_HUMAN Jouberin OS=Homo sapiens GN=AHI1 PE=1 SV=1
          Length = 1196

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 17/46 (36%), Positives = 22/46 (47%)
 Frame = -3

Query: 494 RFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADH 357
           R  AA C S +    I +   +G F+ +LC     IYDL  S  DH
Sbjct: 622 RILAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLSWSKDDH 667


>sp|Q9QYC1|PCX1_MOUSE Pecanex-like protein 1 OS=Mus musculus GN=Pcnx
           PE=2 SV=3
          Length = 2344

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 16/57 (28%), Positives = 30/57 (52%)
 Frame = +1

Query: 127 ASMAMLPIGTYMAKRCSADVTAMSLKRQHANS*NSARVKNCLPEGANPPSLRMRSTS 297
           AS++ LP+     +R    VT +   + H+ +  S+  K+C P  + P + R +S+S
Sbjct: 296 ASLSGLPLYQQQQRRGLDPVTELDSSKPHSGTRESSAGKSCPPAQSQPAADRRKSSS 352


>sp|P84770|IRS1B_XENLA Insulin receptor substrate 1-B OS=Xenopus
           laevis GN=irs1-B PE=2 SV=1
          Length = 1088

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 450 HIPPHSSRSLPLPALRCKPA 391
           H P + SRS+P+PA RC P+
Sbjct: 362 HPPLNHSRSIPMPATRCSPS 381


>sp|Q91615|IRS1A_XENLA Insulin receptor substrate 1-A OS=Xenopus
           laevis GN=irs1-A PE=1 SV=1
          Length = 885

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 450 HIPPHSSRSLPLPALRCKPA 391
           H P + SRS+P+PA RC P+
Sbjct: 159 HPPLNHSRSIPMPATRCSPS 178
tr_hit_id A9T3Y6
Definition tr|A9T3Y6|A9T3Y6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 173
Score (bit) 145.0
E-value 9.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914072|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_E08.
         (529 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T3Y6|A9T3Y6_PHYPA Predicted protein OS=Physcomitrella paten...   145   9e-34
tr|A9TC58|A9TC58_PHYPA Predicted protein (Fragment) OS=Physcomit...   114   3e-24
tr|Q0JC31|Q0JC31_ORYSJ Os04g0495300 protein OS=Oryza sativa subs...    74   5e-12
tr|A2XV22|A2XV22_ORYSI Putative uncharacterized protein OS=Oryza...    74   5e-12
tr|Q7XU55|Q7XU55_ORYSJ OSJNBb0091E11.22 protein OS=Oryza sativa ...    72   1e-11
tr|Q01IQ7|Q01IQ7_ORYSA OSIGBa0159F11.7 protein OS=Oryza sativa G...    72   1e-11
tr|A5B6N7|A5B6N7_VITVI Putative uncharacterized protein OS=Vitis...    72   1e-11
tr|B6TPL6|B6TPL6_MAIZE Putative uncharacterized protein OS=Zea m...    63   1e-08
tr|O22868|O22868_ARATH Expressed protein (At2g43540) (Putative u...    60   9e-08
tr|B8DSB7|B8DSB7_DESVM PfkB domain protein OS=Desulfovibrio vulg...    35   1.8  
tr|A7QNX5|A7QNX5_VITVI Chromosome chr1 scaffold_135, whole genom...    35   3.0  
tr|A5CB73|A5CB73_VITVI Putative uncharacterized protein OS=Vitis...    35   3.0  
tr|Q9ZFB8|Q9ZFB8_RHIET Glutamate synthase small subunit OS=Rhizo...    34   4.0  
tr|Q9S4C5|Q9S4C5_9BACT Particulate methane monooxygenase protein...    34   4.0  
tr|Q132D1|Q132D1_RHOPS Putative deoxyribonuclease OS=Rhodopseudo...    33   6.7  
tr|A1A5V4|A1A5V4_DANRE Zgc:158257 OS=Danio rerio GN=zgc:158257 P...    33   8.8  
tr|A7AVN8|A7AVN8_BABBO Conserved hypothetcial protein OS=Babesia...    33   8.8  

>tr|A9T3Y6|A9T3Y6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_191377 PE=4 SV=1
          Length = 179

 Score =  145 bits (367), Expect = 9e-34
 Identities = 79/173 (45%), Positives = 111/173 (64%), Gaps = 5/173 (2%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           +K+E  L  S+ FQAA+C SFEEC+ +S H+  G+ +YQL DAS RIYD I       DD
Sbjct: 7   KKIEGTLLTSSAFQAAICASFEECMILSQHSYPGLQVYQLLDASIRIYDKI---VIDEDD 63

Query: 347 PAFLLKQRWLPSPPTQADVDLILRDGGFAPSGKQFLTLAEFHEFACCLFRDMAVTSAEHR 168
                K+RWLP+PP+Q +VD  ++       G++ L + EF  FA  LFRDM +T+A HR
Sbjct: 64  KVSRYKERWLPNPPSQLEVDATIKKERLLRGGQKVLDVDEFRMFATVLFRDMGLTTARHR 123

Query: 167 LAMYVPIGSIAMLAVHLSVRRL----PAYRSAGLLGPG-ILGTVMATMLALGF 24
           LA+YVP+GS+A+L   LS R+L    P YR+ G L PG +LG+V+  +++  F
Sbjct: 124 LALYVPLGSLAVLIADLSARKLPLIGPMYRAGGPLMPGLLLGSVVGVVVSTQF 176


>tr|A9TC58|A9TC58_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_220935 PE=4 SV=1
          Length = 131

 Score =  114 bits (285), Expect = 3e-24
 Identities = 62/132 (46%), Positives = 82/132 (62%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           ++VE+ L  S  F AAV  SFEEC+A+S H   G+ LYQL DASRR+YD I  P    +D
Sbjct: 7   KRVEETLSTSLSFHAAVDASFEECMALSQHAFPGLQLYQLLDASRRVYDKIPLP---EED 63

Query: 347 PAFLLKQRWLPSPPTQADVDLILRDGGFAPSGKQFLTLAEFHEFACCLFRDMAVTSAEHR 168
                KQRWLP  PTQA VD  +R        ++ + + EF  FA  LFRDM + +A HR
Sbjct: 64  EVARYKQRWLPHRPTQAQVDATVRKERL----RRTVAIDEFRAFALVLFRDMGLATARHR 119

Query: 167 LAMYVPIGSIAM 132
           L +YVP+G++A+
Sbjct: 120 LVVYVPLGTLAV 131


>tr|Q0JC31|Q0JC31_ORYSJ Os04g0495300 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0495300 PE=4 SV=1
          Length = 162

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 50/165 (30%), Positives = 79/165 (47%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           ++V+  LR +  F AA   +F  C+A + +  AGV  YQL DAS  ++  +         
Sbjct: 7   KRVDAALRGAPAFAAACDDAFGRCLADAQYAFAGVRPYQLADASAHLHSSLRG------- 59

Query: 347 PAFLLKQRWLPSPPTQADVDLILRDGGFAPSGKQFLTLAEFHEFACCLFRDMAVTSAEHR 168
            +  L +RW+PSPP +A VD  LR  G   +    L+  +F EFA  LFR+  +  A   
Sbjct: 60  -SLPLVRRWVPSPPPRARVDSALRAAGLEDAA--VLSRGQFREFAAELFREAVLAGAAQA 116

Query: 167 LAMYVPIGSIAMLAVHLSVRRLPAYRSAGLLGPGILGTVMATMLA 33
             +  P G+  ++ V L+ R           G G++G ++A   A
Sbjct: 117 ALVRAPAGAAGLVGVGLATR----------AGAGVVGRLVAIYTA 151


>tr|A2XV22|A2XV22_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16460 PE=4 SV=1
          Length = 162

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 50/165 (30%), Positives = 79/165 (47%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           ++V+  LR +  F AA   +F  C+A + +  AGV  YQL DAS  ++  +         
Sbjct: 7   KRVDAALRGAPAFAAACDDAFGRCLADAQYAFAGVRPYQLADASAHLHSSLRG------- 59

Query: 347 PAFLLKQRWLPSPPTQADVDLILRDGGFAPSGKQFLTLAEFHEFACCLFRDMAVTSAEHR 168
            +  L +RW+PSPP +A VD  LR  G   +    L+  +F EFA  LFR+  +  A   
Sbjct: 60  -SLPLVRRWVPSPPPRARVDSALRAAGLEDAA--VLSRGQFREFAAELFREAVLAGAAQA 116

Query: 167 LAMYVPIGSIAMLAVHLSVRRLPAYRSAGLLGPGILGTVMATMLA 33
             +  P G+  ++ V L+ R           G G++G ++A   A
Sbjct: 117 ALVRAPAGAAGLVGVGLATR----------AGAGVVGRLVAIYTA 151


>tr|Q7XU55|Q7XU55_ORYSJ OSJNBb0091E11.22 protein OS=Oryza sativa
           subsp. japonica GN=OSJNBb0091E11.22 PE=4 SV=2
          Length = 222

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 48/152 (31%), Positives = 75/152 (49%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           ++V+  LR +  F AA   +F  C+A + +  AGV  YQL DAS  ++  +         
Sbjct: 7   KRVDAALRGAPAFAAACDDAFGRCLADAQYAFAGVRPYQLADASAHLHSSLRG------- 59

Query: 347 PAFLLKQRWLPSPPTQADVDLILRDGGFAPSGKQFLTLAEFHEFACCLFRDMAVTSAEHR 168
            +  L +RW+PSPP +A VD  LR  G   +    L+  +F EFA  LFR+  +  A   
Sbjct: 60  -SLPLVRRWVPSPPPRARVDSALRAAGLEDAA--VLSRGQFREFAAELFREAVLAGAAQA 116

Query: 167 LAMYVPIGSIAMLAVHLSVRRLPAYRSAGLLG 72
             +  P G+  ++ V L+ R       AG++G
Sbjct: 117 ALVRAPAGAAGLVGVGLATR-----AGAGVVG 143


>tr|Q01IQ7|Q01IQ7_ORYSA OSIGBa0159F11.7 protein OS=Oryza sativa
           GN=OSIGBa0159F11.7 PE=4 SV=1
          Length = 222

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 48/152 (31%), Positives = 75/152 (49%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           ++V+  LR +  F AA   +F  C+A + +  AGV  YQL DAS  ++  +         
Sbjct: 7   KRVDAALRGAPAFAAACDDAFGRCLADAQYAFAGVRPYQLADASAHLHSSLRG------- 59

Query: 347 PAFLLKQRWLPSPPTQADVDLILRDGGFAPSGKQFLTLAEFHEFACCLFRDMAVTSAEHR 168
            +  L +RW+PSPP +A VD  LR  G   +    L+  +F EFA  LFR+  +  A   
Sbjct: 60  -SLPLVRRWVPSPPPRARVDSALRAAGLEDAA--VLSRGQFREFAAELFREAVLAGAAQA 116

Query: 167 LAMYVPIGSIAMLAVHLSVRRLPAYRSAGLLG 72
             +  P G+  ++ V L+ R       AG++G
Sbjct: 117 ALVRAPAGAAGLVGVGLATR-----AGAGVVG 143


>tr|A5B6N7|A5B6N7_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017781 PE=4 SV=1
          Length = 167

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 59/168 (35%), Positives = 77/168 (45%), Gaps = 2/168 (1%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           ++V+  L+ S +F +   + + EC+ +S H  AGV  YQL  AS R++    S  DH   
Sbjct: 7   KRVKSSLQNSPKFDSVCDSVYSECLDLSEHAFAGVRPYQLSGASLRLH---QSLCDHHP- 62

Query: 347 PAFLLKQRWLPSPPTQADVDLILRDGGFAPSGKQFLTL--AEFHEFACCLFRDMAVTSAE 174
               L +RW+PSPPTQ  VD  LR    +    Q  TL   EF  F   LF D  V  A 
Sbjct: 63  ----LIKRWVPSPPTQLQVDRALRVVTRSGDSVQDQTLGRVEFKAFEVELFADAVVAGAG 118

Query: 173 HRLAMYVPIGSIAMLAVHLSVRRLPAYRSAGLLGPGILGTVMATMLAL 30
             L   VPIG   +  V L V R      A  +G   LG   +  L L
Sbjct: 119 QALLRRVPIGVAGIAGVGL-VARSGKELVATAIGVYALGVATSVYLGL 165


>tr|B6TPL6|B6TPL6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 160

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 6/137 (4%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           ++V+  LR +  F AA   +F+ C+A +     GV  YQL DA+  ++  +S+       
Sbjct: 7   KRVDAALRRAPLFAAACDAAFDRCLADAQRRFPGVRRYQLADAAAHLHSELSASVP---- 62

Query: 347 PAFLLKQRWLPSPPTQADVDLILRDGGFAPSGKQFLTLAEFHEFACCLFRDMAVTSAEHR 168
               L +RW+PSPP +  VD  LR  G     +  L+  +F EFA  LFR+  +  A   
Sbjct: 63  ----LVRRWVPSPPPRVRVDAALRAAGLEDEAE--LSRLQFREFAVELFREAVLAGAADL 116

Query: 167 L------AMYVPIGSIA 135
           L      A  V IG +A
Sbjct: 117 LRAPAAAAGIVGIGMVA 133


>tr|O22868|O22868_ARATH Expressed protein (At2g43540) (Putative
           uncharacterized protein) OS=Arabidopsis thaliana
           GN=At2g43540 PE=2 SV=1
          Length = 169

 Score = 59.7 bits (143), Expect = 9e-08
 Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 3/169 (1%)
 Frame = -3

Query: 527 QKVEKKLRESTRFQAAVCTSFEECIAISHHTAAGVFLYQLCDASRRIYDLISSPADHADD 348
           ++V   L  S  F +A  ++++E ++++ H  AGV  YQL  A+  I+  +S+       
Sbjct: 7   KRVTTILSNSPEFDSACDSAYDESLSLAQHAFAGVRPYQLVSAAAHIHRNLSA------- 59

Query: 347 PAFLLKQRWLPSPPTQADVDLILR---DGGFAPSGKQFLTLAEFHEFACCLFRDMAVTSA 177
             F L  RWL SPP+Q+ VD  LR       A   ++ L   EF ++A  +F +  V +A
Sbjct: 60  LRFPLITRWLSSPPSQSQVDSALRVTVSRVTAADEEEILGQEEFKKWAVEVFAEAVVGNA 119

Query: 176 EHRLAMYVPIGSIAMLAVHLSVRRLPAYRSAGLLGPGILGTVMATMLAL 30
              +A  +P+G + +  +  +V R         +G   +G   +  L+L
Sbjct: 120 RKTIASRIPLGIVGIGGIG-AVTRSGQNLIGAAIGVYAIGVATSVFLSL 167


>tr|B8DSB7|B8DSB7_DESVM PfkB domain protein OS=Desulfovibrio
           vulgaris (strain Miyazaki) GN=DvMF_2935 PE=4 SV=1
          Length = 308

 Score = 35.4 bits (80), Expect = 1.8
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 18/87 (20%)
 Frame = +3

Query: 267 PAISEDEIHICLSG------------------GRRKPSLLEKKSWVVCVVCRRGDEIIDA 392
           PA+S D+++  + G                  GR K  LLE+  W++  +   G  I + 
Sbjct: 172 PALSGDQLYEAICGAHMLVTNDYELEMIMKATGRTKAELLERTGWIITTMSEHGSRIDNG 231

Query: 393 PACIAELVKEDSCCCVVGYGDALFKAG 473
              +   VK D      G GDA ++AG
Sbjct: 232 SPVLVPAVKADRVLDPTGAGDA-YRAG 257