BP914074
Clone id YMU001_000039_E10
Library
Length 473
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_E10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TAGCATTACAAACTTGTCATGTTTATTCATTTATCATCTTGATGTCGTCTCAAATTCTTC
TCATCTCCCAGGCCGTCGTACACCACCCATTCCAGGACTGCTCGTTGTCAAGGGCAAGCA
CTCAAGTACTACCAAAAAAGAGAACGTGTTGTCTATGCTCGTTTATACCAAGTGTGTTTG
TTGTGCATGACACACATCCATGTGCGTCTCCTCGAGCTACTTCTACACTTGTTTATATTA
TGTTCAAGTGTAGGGCCATATGCCCTCTCCTATCAACATCTCAACTCATTTACATCAAGT
CCATTTGTTATGCAAGGCAGACATCCATAACGCCTCCCCTAACTAATTCTATGCCCATTT
ACATCATGTGCAAGTATAGGTCAAGGGGCCACATGCCCTCTTCTATCAACATGGCAATTC
CTTTCCCTAAAAACACCTACACAGGTATGTGATTCCCCCTTCATACAAGCTCA
■■Homology search results ■■ -
sp_hit_id P36357
Definition sp|P36357|VS09_ROTA1 Glycoprotein VP7 OS=Rotavirus A (strain Turkey/Ireland/Ty-1/1978 G7-P[17]-I4-Rx-Cx-Mx-Ax-N4-Tx-E4-Hx)
Align length 77
Score (bit) 30.4
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914074|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_E10.
(473 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P36357|VS09_ROTA1 Glycoprotein VP7 OS=Rotavirus A (strain Tur... 30 4.2
sp|P59051|CU087_HUMAN Uncharacterized protein C21orf87 OS=Homo s... 30 4.2
sp|O43830|ZNF73_HUMAN Zinc finger protein 73 OS=Homo sapiens GN=... 29 9.3
sp|Q4LDE5|SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF a... 29 9.3
sp|Q8VII6|CTL1_RAT Choline transporter-like protein 1 OS=Rattus ... 29 9.3
sp|Q8WWI5|CTL1_HUMAN Choline transporter-like protein 1 OS=Homo ... 29 9.3

>sp|P36357|VS09_ROTA1 Glycoprotein VP7 OS=Rotavirus A (strain
Turkey/Ireland/Ty-1/1978
G7-P[17]-I4-Rx-Cx-Mx-Ax-N4-Tx-E4-Hx) GN=S9 PE=2 SV=1
Length = 329

Score = 30.4 bits (67), Expect = 4.2
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 3/77 (3%)
Frame = +3

Query: 228 LVYIMFKCRAICPLLSTSQL---IYIKSICYARQTSITPPLTNSMPIYIMCKYRSRGHMP 398
++Y M A PLL + L + + S CYA+ I P+T SM + + K + +
Sbjct: 22 ILYDMLHKMANSPLLCIAVLTVTLAVTSKCYAQNYGINVPITGSMDVAVPNK--TDDQIG 79

Query: 399 SSINMAIPFPKNTYTGM 449
S + I +PK T M
Sbjct: 80 LSSTLCIYYPKEAATQM 96


>sp|P59051|CU087_HUMAN Uncharacterized protein C21orf87 OS=Homo
sapiens GN=C21orf87 PE=2 SV=1
Length = 145

Score = 30.4 bits (67), Expect = 4.2
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = +3

Query: 87 PFQDCSLSRASTQVLPKKRTCCLCSFIPSVFVVHDTHPCASPRATSTL 230
P + L A P + C LC+F+P ++V D P A TL
Sbjct: 7 PSRQPQLRAAPPTRTPSAKRCILCNFLPGCWLVGDVAGSRQPSAPQTL 54


>sp|O43830|ZNF73_HUMAN Zinc finger protein 73 OS=Homo sapiens
GN=ZNF73 PE=3 SV=1
Length = 326

Score = 29.3 bits (64), Expect = 9.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -1

Query: 329 YGCLPCITNGLDVNELRC**ERAYGPTLEHNINKCRSSSRRRTWMCVMHNKHTWYK 162
Y C+ C VN+L R + + ++C + +++++ + H HTW K
Sbjct: 145 YKCIEC-GKTFTVNQLLTLHHRTHSGEKPYQCSECGKTFSQKSYLTIHHRTHTWQK 199


>sp|Q4LDE5|SVEP1_HUMAN Sushi, von Willebrand factor type A, EGF and
pentraxin domain-containing protein 1 OS=Homo sapiens
GN=SVEP1 PE=1 SV=2
Length = 3574

Score = 29.3 bits (64), Expect = 9.3
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 4/48 (8%)
Frame = -1

Query: 320 LPCITNGLD---VNELRC**ERAY-GPTLEHNINKCRSSSRRRTWMCV 189
LPC+ NG+ V E C Y G E NIN+C SS +CV
Sbjct: 1238 LPCLNNGVCKDLVGEFICECPSGYTGQRCEENINECSSSPCLNKGICV 1285


>sp|Q8VII6|CTL1_RAT Choline transporter-like protein 1 OS=Rattus
norvegicus GN=Slc44a1 PE=1 SV=1
Length = 656

Score = 29.3 bits (64), Expect = 9.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2

Query: 5 ITNLSCLFIYHLDVVSNSSHLPGRRTPPIPGLLVVKGKHSSTTKKENVLSMLVYTKCVCC 184
+ +++ L YHL V+ S + P L+ + HS KEN + + C+CC
Sbjct: 428 LASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYI---HSQLKGKENACARCMLKSCICC 484

Query: 185 A*HTSMCVS 211
C+S
Sbjct: 485 LWCLEKCLS 493


>sp|Q8WWI5|CTL1_HUMAN Choline transporter-like protein 1 OS=Homo
sapiens GN=SLC44A1 PE=1 SV=1
Length = 657

Score = 29.3 bits (64), Expect = 9.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2

Query: 5 ITNLSCLFIYHLDVVSNSSHLPGRRTPPIPGLLVVKGKHSSTTKKENVLSMLVYTKCVCC 184
+ +++ L YHL V+ S + P L+ + HS KEN + V C+CC
Sbjct: 429 LASVNRLIRYHLGTVAKGSFIITLVKIPRMILMYI---HSQLKGKENACARCVLKSCICC 485

Query: 185 A*HTSMCVS 211
C++
Sbjct: 486 LWCLEKCLN 494


tr_hit_id Q5ACH6
Definition tr|Q5ACH6|Q5ACH6_CANAL Potential transporter OS=Candida albicans
Align length 40
Score (bit) 33.1
E-value 7.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914074|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_E10.
(473 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5ACH6|Q5ACH6_CANAL Potential transporter OS=Candida albicans... 33 7.1

>tr|Q5ACH6|Q5ACH6_CANAL Potential transporter OS=Candida albicans
GN=SEO13 PE=4 SV=1
Length = 523

Score = 33.1 bits (74), Expect = 7.1
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1

Query: 337 P*LILCPFTSCASIGQGATCPLLSTWQFLSLKTPTQVCDS 456
P + LC SCA+IGQ P TW L+LK P+ V +S
Sbjct: 321 PIVFLCYNNSCAAIGQ----PTFQTWLKLTLKKPSSVYNS 356