BP914078
Clone id YMU001_000039_F02
Library
Length 462
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_F02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TACGACTGCGTTCTCAACAACTAGTATCAGAGCTTTTGGTGCAAGATCTTTCAGGAAAGG
GTTAAGGGAGTGCTCGTGGGAGCTGTAGAAGAGAATCGGGTAAGGCGCCATGGTCGGCTG
AAAGGTGTAATAGAGAAGGAAGGGGTTTTAAAGTCATACACATGGTGCGGGATAAGGGCG
GCCCAAAAACTCCAAGGGCTGAACTGGTGGTACTAGGTGGGCTCAGCCTGAGAAAAGGAG
CGTAGGTGGATGGAGACCAGAGGAGGGTTATTCAGCTTTGATCAGTGCCCATAGCTCCAA
AGGGGTAGCCAAGATATGAGGCCAAGTAGAGGTGGCGCAGCCTGTGGATGGGCAAATAGA
TCCATACTAACAGGAGGCCTGTATCTCCTCCAAGGGGAAGCACAAGCCTCACAAACTTTT
GTTCAGTGACGGCAAAGAAAAATCTGCGGATGGCCACTGCGT
■■Homology search results ■■ -
sp_hit_id P97772
Definition sp|P97772|GRM1_MOUSE Metabotropic glutamate receptor 1 OS=Mus musculus
Align length 64
Score (bit) 34.7
E-value 0.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914078|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_F02.
(462 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P97772|GRM1_MOUSE Metabotropic glutamate receptor 1 OS=Mus mu... 35 0.20
sp|P23385|GRM1_RAT Metabotropic glutamate receptor 1 OS=Rattus n... 33 0.45
sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein ... 32 1.0
sp|P44779|FUCI_HAEIN L-fucose isomerase OS=Haemophilus influenza... 32 1.7
sp|A5UAS8|FUCI_HAEIE L-fucose isomerase OS=Haemophilus influenza... 32 1.7
sp|O94537|PPK4_SCHPO Serine/threonine-protein kinase ppk4 OS=Sch... 31 2.3
sp|Q8N2I2|ZN619_HUMAN Zinc finger protein 619 OS=Homo sapiens GN... 30 3.8
sp|Q6WXV7|PC11X_PONPY Protocadherin-11 X-linked OS=Pongo pygmaeu... 30 3.8
sp|P0C215|P12I_HTL1A Accessory protein p12I OS=Human T-cell leuk... 30 3.9
sp|Q8K4N2|SPG11_MOUSE Sperm-associated antigen 11 OS=Mus musculu... 30 5.0
sp|P53370|NUDT6_HUMAN Nucleoside diphosphate-linked moiety X mot... 30 6.5
sp|Q07266|DREB_RAT Drebrin OS=Rattus norvegicus GN=Dbn1 PE=2 SV=3 30 6.5
sp|Q9QXS6|DREB_MOUSE Drebrin OS=Mus musculus GN=Dbn1 PE=1 SV=4 30 6.5
sp|O60293|ZC3H1_HUMAN Zinc finger C3H1 domain-containing protein... 29 8.5

>sp|P97772|GRM1_MOUSE Metabotropic glutamate receptor 1 OS=Mus
musculus GN=Grm1 PE=2 SV=2
Length = 1199

Score = 34.7 bits (78), Expect = 0.20
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -3

Query: 238 PFLRLSPPSTTSSALGVFGPPLSRTMCMTLKPLPSLLHLSADHGALPDSLLQLPRALP*P 59
P SPPS+ S + GPP++ T PLP HLSA+ L + +P+ LP P
Sbjct: 964 PSTHFSPPSSPSMVVHRRGPPVA-----TTPPLPP--HLSAEETPLFLADSVIPKGLPPP 1016

Query: 58 FPER 47
P++
Sbjct: 1017 LPQQ 1020


>sp|P23385|GRM1_RAT Metabotropic glutamate receptor 1 OS=Rattus
norvegicus GN=Grm1 PE=1 SV=1
Length = 1199

Score = 33.5 bits (75), Expect = 0.45
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = -3

Query: 238 PFLRLSPPSTTSSALGVFGPPLSRTMCMTLKPLPSLLHLSADHGALPDSLLQLPRALP*P 59
P SPPS+ S + GPP++ T PLP HL+A+ L + +P+ LP P
Sbjct: 964 PSAHFSPPSSPSMVVHRRGPPVA-----TTPPLPP--HLTAEETPLFLADSVIPKGLPPP 1016

Query: 58 FPER 47
P++
Sbjct: 1017 LPQQ 1020


>sp|P36956|SRBP1_HUMAN Sterol regulatory element-binding protein 1
OS=Homo sapiens GN=SREBF1 PE=1 SV=2
Length = 1147

Score = 32.3 bits (72), Expect = 1.0
Identities = 34/93 (36%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Frame = -3

Query: 298 GAMGTDQS*ITLLWSPSTYAPFLRLSPPSTTSSALGVF--GP-----PLS--RTMCMTLK 146
GA GTD + SP T +P PP+T SS+L F GP PLS + LK
Sbjct: 55 GAGGTDPA------SPDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLK 108

Query: 145 PLPSLLHLSADHG----ALPDSLLQLPRALP*P 59
PS+ S G ++P S+LQ P P P
Sbjct: 109 MYPSMPAFSPGPGIKEESVPLSILQTPTPQPLP 141


>sp|P44779|FUCI_HAEIN L-fucose isomerase OS=Haemophilus influenzae
GN=fucI PE=3 SV=2
Length = 589

Score = 31.6 bits (70), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2

Query: 212 TRWAQPEKRSVGGWRPEEGYSALISAHSS 298
T W+Q V GWRPE G+ LI++ S+
Sbjct: 367 TYWSQDSVERVTGWRPESGFIHLINSGSA 395


>sp|A5UAS8|FUCI_HAEIE L-fucose isomerase OS=Haemophilus influenzae
(strain PittEE) GN=fucI PE=3 SV=1
Length = 589

Score = 31.6 bits (70), Expect = 1.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2

Query: 212 TRWAQPEKRSVGGWRPEEGYSALISAHSS 298
T W+Q V GWRPE G+ LI++ S+
Sbjct: 367 TYWSQDSVERVTGWRPESGFIHLINSGSA 395


>sp|O94537|PPK4_SCHPO Serine/threonine-protein kinase ppk4
OS=Schizosaccharomyces pombe GN=ppk4 PE=2 SV=1
Length = 1072

Score = 31.2 bits (69), Expect = 2.3
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = -1

Query: 102 YPILFYSSHEHSLNPFLKDLAPKALILVVENA 7
Y I F SH HSL+ +DL P+ ++LVV N+
Sbjct: 756 YQIAFGVSHLHSLDLVHRDLKPQNILLVVNNS 787


>sp|Q8N2I2|ZN619_HUMAN Zinc finger protein 619 OS=Homo sapiens
GN=ZNF619 PE=2 SV=1
Length = 560

Score = 30.4 bits (67), Expect = 3.8
Identities = 22/52 (42%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -3

Query: 244 YAPFLRLSP--PSTTSSALGVFGPPLSRTMCMTLKP-LPSLLHLSADHGALP 98
Y P LSP P T SAL GPPLS + + L P +P L L + A P
Sbjct: 479 YCPCAILSPLPPQHTCSALAPPGPPLSSSHAVVLPPSVPFFLLLPSSEKANP 530


>sp|Q6WXV7|PC11X_PONPY Protocadherin-11 X-linked OS=Pongo pygmaeus
GN=PCDH11X PE=3 SV=1
Length = 1347

Score = 30.4 bits (67), Expect = 3.8
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -3

Query: 253 PSTYAPFLRLSPPSTTSSALGVFGPPLSRTMCMT-LKPLPSLLHLSADHGALPDSLLQ 83
P A LR SPPS +SAL + PPL++ ++ PLP ++ L SL Q
Sbjct: 1224 PLVQATALRHSPPSAQASAL-CYSPPLAQAAAISHSSPLPQVIALHRSQAQSSVSLQQ 1280


>sp|P0C215|P12I_HTL1A Accessory protein p12I OS=Human T-cell
leukemia virus 1 (strain Japan ATK-1 subtype A) PE=1
SV=1
Length = 99

Score = 30.4 bits (67), Expect = 3.9
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 5/51 (9%)
Frame = -1

Query: 216 LVPPVQPLEFLGRPYPAPCV*L*NPF-----LLYYTFQPTMAPYPILFYSS 79
L+PP L RP PAPC+ L PF LL+ F P P+L S
Sbjct: 21 LLPPSDVSGLLLRPPPAPCLLLFLPFQILSGLLFLLFLPLFFSLPLLLSPS 71


>sp|Q8K4N2|SPG11_MOUSE Sperm-associated antigen 11 OS=Mus musculus
GN=Spag11 PE=3 SV=2
Length = 71

Score = 30.0 bits (66), Expect = 5.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2

Query: 461 RSGHPQIFLCRH*TKVCEACASPWRRYRPPVSM 363
+ GH ++F+CR + + C+ PW R P S+
Sbjct: 35 QQGHCRLFMCRSGERKGDICSDPWNRCCVPYSV 67


tr_hit_id B5RI44
Definition tr|B5RI44|B5RI44_SALSA AF4/FMR2 family member 3 isoform 2-like (Fragment) OS=Salmo salar
Align length 58
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914078|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_F02.
(462 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B5RI44|B5RI44_SALSA AF4/FMR2 family member 3 isoform 2-like (... 36 1.1
tr|B4DLQ8|B4DLQ8_HUMAN cDNA FLJ55718, highly similar to Sterol r... 35 1.9
tr|Q3V0U2|Q3V0U2_MOUSE Putative uncharacterized protein (Fragmen... 35 2.4
tr|B0CRP7|B0CRP7_LACBS Predicted protein OS=Laccaria bicolor (st... 34 3.2
tr|Q5BVK7|Q5BVK7_SCHJA SJCHGC04949 protein (Fragment) OS=Schisto... 34 4.1
tr|Q6L7U7|Q6L7U7_9DELA P12 OS=Human T-lymphotropic virus 1 GN=p1... 33 7.0
tr|Q7XM59|Q7XM59_ORYSJ OSJNBb0020O11.13 protein OS=Oryza sativa ... 33 9.1
tr|Q9ZU81|Q9ZU81_ARATH Putative uncharacterized protein At2g4808... 33 9.2
tr|B2B5D8|B2B5D8_PODAN Predicted CDS Pa_2_4370 OS=Podospora anse... 33 9.2

>tr|B5RI44|B5RI44_SALSA AF4/FMR2 family member 3 isoform 2-like
(Fragment) OS=Salmo salar PE=2 SV=1
Length = 287

Score = 35.8 bits (81), Expect = 1.1
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -3

Query: 241 APFLRLSPPSTTSSALGVFGPPLSRTMCMTLKPLPSLLHLSADHGALPDSLLQLPRAL 68
+P + +PP + S G GPP S L P PS L L + G+ P SL+ +P+ +
Sbjct: 164 SPKVPTTPPIWSDSGKGTGGPPSS------LSPSPSALTLGSHTGSSPSSLISIPQRI 215


>tr|B4DLQ8|B4DLQ8_HUMAN cDNA FLJ55718, highly similar to Sterol
regulatory element-binding protein 1 OS=Homo sapiens
PE=2 SV=1
Length = 984

Score = 35.0 bits (79), Expect = 1.9
Identities = 35/95 (36%), Positives = 44/95 (46%), Gaps = 13/95 (13%)
Frame = -3

Query: 298 GAMGTDQS*ITLLWSPSTYAPFLRLSPPSTTSSALGVF--GP-----PLS--RTMCMTLK 146
GA GTD + SP T +P PP+T SS+L F GP PLS + LK
Sbjct: 31 GAGGTDPA------SPDTSSPGSLSPPPATLSSSLEAFLSGPQAAPSPLSPPQPAPTPLK 84

Query: 145 PLPSLLHLSADHG----ALPDSLLQLPRALP*PFP 53
PS+ S G ++P S+LQ P P P P
Sbjct: 85 MYPSMPAFSPGPGIKEESVPLSILQTPTPQPLPLP 119


>tr|Q3V0U2|Q3V0U2_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Grm1 PE=2 SV=1
Length = 742

Score = 34.7 bits (78), Expect = 2.4
Identities = 23/64 (35%), Positives = 33/64 (51%)
Frame = -3

Query: 238 PFLRLSPPSTTSSALGVFGPPLSRTMCMTLKPLPSLLHLSADHGALPDSLLQLPRALP*P 59
P SPPS+ S + GPP++ T PLP HLSA+ L + +P+ LP P
Sbjct: 507 PSTHFSPPSSPSMVVHRRGPPVA-----TTPPLPP--HLSAEETPLFLADSVIPKGLPPP 559

Query: 58 FPER 47
P++
Sbjct: 560 LPQQ 563


>tr|B0CRP7|B0CRP7_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_301241 PE=4 SV=1
Length = 1238

Score = 34.3 bits (77), Expect = 3.2
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = -3

Query: 238 PFLRLSPPSTTSSALGVFGPPLSRTMCMTLKPLPSLLHLSADHGALPD 95
PF R PST +S++G + P S+ M + P LHL D AL D
Sbjct: 67 PFRRSPTPSTATSSVGFYSPSTSKFMLHVIPP----LHLPHDSDALDD 110


>tr|Q5BVK7|Q5BVK7_SCHJA SJCHGC04949 protein (Fragment)
OS=Schistosoma japonicum PE=2 SV=2
Length = 193

Score = 33.9 bits (76), Expect = 4.1
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = -3

Query: 211 TTSSALGVFGPPLSRT--MCMTLKPLPSLLHLSADHGALPDSL 89
T+S++LGV GP R M MT+K L LLH + G L D +
Sbjct: 143 TSSTSLGVAGPSEDRAQLMRMTIKQLTELLHYECNTGMLTDEM 185


>tr|Q6L7U7|Q6L7U7_9DELA P12 OS=Human T-lymphotropic virus 1 GN=p12
PE=4 SV=1
Length = 99

Score = 33.1 bits (74), Expect = 7.0
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Frame = -1

Query: 216 LVPPVQPLEFLGRPYPAPCV*L*NPF-----LLYYTFQPTMAPYPILFYSS 79
L+PP L RP PAPC+ L PF LL+ F P P P+L S
Sbjct: 21 LLPPGDVSGLLLRPPPAPCLLLFLPFQILSNLLFLLFLPLFFPLPLLLSPS 71


>tr|Q7XM59|Q7XM59_ORYSJ OSJNBb0020O11.13 protein OS=Oryza sativa
subsp. japonica GN=OSJNBb0020O11.13 PE=4 SV=2
Length = 202

Score = 32.7 bits (73), Expect = 9.1
Identities = 25/85 (29%), Positives = 36/85 (42%)
Frame = +1

Query: 124 GVIEKEGVLKSYTWCGIRAAQKLQGLNWWY*VGSA*EKERRWMETRGGLFSFDQCP*LQR 303
GV + + W + ++ G W+ G + E+ RR M GG + Q
Sbjct: 37 GVAVASSSPRRWWWQRRKGERRRDGAARWWGRGRSEEEGRREMRDGGGEVAGSQ------ 90

Query: 304 GSQDMRPSRGGAACGWANRSILTGG 378
GS+D RP+ GG A W RS G
Sbjct: 91 GSEDGRPAVGGGAL-WMRRSAAASG 114


>tr|Q9ZU81|Q9ZU81_ARATH Putative uncharacterized protein At2g48080
OS=Arabidopsis thaliana GN=At2g48080 PE=2 SV=1
Length = 433

Score = 32.7 bits (73), Expect = 9.2
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
Frame = -3

Query: 262 LWSPSTYAPFLRLSP-PSTTSSALGVF---GPPLSRTMCMTLKPLPSLLHLSADHGALPD 95
LW P T +P + L+P P + GVF PP+SR L P L L + ++ D
Sbjct: 363 LWRPGTPSPLVMLAPAPKRLDAGTGVFLPWTPPVSRKPAKHLPPRVQRLRLLSSSKSVAD 422

Query: 94 S 92
S
Sbjct: 423 S 423


>tr|B2B5D8|B2B5D8_PODAN Predicted CDS Pa_2_4370 OS=Podospora
anserina PE=4 SV=1
Length = 730

Score = 32.7 bits (73), Expect = 9.2
Identities = 26/84 (30%), Positives = 37/84 (44%)
Frame = -3

Query: 436 FAVTEQKFVRLVLPLGGDTGLLLVWIYLPIHRLRHLYLASYLGYPFGAMGTDQS*ITLLW 257
+A EQ F L LG + L Y+P+ + LY +Y YP A GT
Sbjct: 123 YAKIEQTFSALFDVLGIEPTLPR---YIPLEEQKKLY--NYSAYPKNADGT--------- 168

Query: 256 SPSTYAPFLRLSPPSTTSSALGVF 185
P+ Y P L+ PP + + G+F
Sbjct: 169 -PAQYPPHLQTIPPEHSYTPFGIF 191