BP914098 [AcEST]

BP914098
Clone id	YMU001_000039_H01
Library	YMU01
Length	316
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000039_H01.
Accession	BP914098
Tissue type	prothallium
Developmental stage	-
Contig ID	CL2785Contig1
Sequence	GCTCCCACACACACACCAACATCAATACAACTATCTTGTACTGAGTTTCTATCATATCGC TCATTGGAGGCCAATCAGCTGAGGCATAGTGCCACTCAATACTCTTTACAGCTAGCTCCA AAGAATGTAAAAGTCTGTCCCCCCAAGTCTGCAGGACAATGAAACAACATTCTTAGCTGC TCTCAAAGACCCTGCATTCTCTCTCGTTGTTCCTATTATGCAAACCTTAACAAAACTCTC AAACGTCCAAGCATAGTGTACATGGAATAGCCAATGCTTTGTTTAAGGTGATGATATAAA CAGCCGATCTTGTTGT
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9EQJ4
Definition	sp\|Q9EQJ4\|ZN384_RAT Zinc finger protein 384 OS=Rattus norvegicus
Align length	64
Score (bit)	30.0
E-value	3.7
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP914098\|Adiantum capillus-veneris mRNA, clone: YMU001_000039_H01. (316 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9EQJ4\|ZN384_RAT Zinc finger protein 384 OS=Rattus norvegicus... 30 3.7 sp\|Q8TF68\|ZN384_HUMAN Zinc finger protein 384 OS=Homo sapiens GN... 29 8.3 >sp\|Q9EQJ4\|ZN384_RAT Zinc finger protein 384 OS=Rattus norvegicus GN=Znf384 PE=1 SV=1 Length = 579 Score = 30.0 bits (66), Expect = 3.7 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +1 Query: 1 APTHTPTSIQLSCTEFLSYR-SLEANQLRHSATQYSLQLAPKNVKVCPPKSAGQNNILS 177 AP H PT + + + LS S++ T +S +N+ V P S G +S Sbjct: 45 APPHYPTLLTVPASVSLSSGISMDTESKSEQLTPHSQASVTQNITVVPVPSTGLMTAGVS 104 Query: 178 CSQR 189 CSQR Sbjct: 105 CSQR 108 >sp\|Q8TF68\|ZN384_HUMAN Zinc finger protein 384 OS=Homo sapiens GN=ZNF384 PE=1 SV=1 Length = 576 Score = 28.9 bits (63), Expect = 8.3 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 1/64 (1%) Frame = +1 Query: 1 APTHTPTSIQLSCTEFL-SYRSLEANQLRHSATQYSLQLAPKNVKVCPPKSAGQNNILS 177 AP H PT + + + L S S++ T +S +N+ V P S G +S Sbjct: 45 APPHYPTLLTVPASVSLPSGISMDTESKSDQLTPHSQASVTQNITVVPVPSTGLMTAGVS 104 Query: 178 CSQR 189 CSQR Sbjct: 105 CSQR 108
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	B6P9J5
Definition	tr\|B6P9J5\|B6P9J5_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae
Align length	55
Score (bit)	33.5
E-value	5.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP914098\|Adiantum capillus-veneris mRNA, clone: YMU001_000039_H01. (316 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|B6P9J5\|B6P9J5_BRAFL Putative uncharacterized protein OS=Branc... 33 5.4 >tr\|B6P9J5\|B6P9J5_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_104344 PE=4 SV=1 Length = 1980 Score = 33.5 bits (75), Expect = 5.4 Identities = 18/55 (32%), Positives = 28/55 (50%) Frame = -1 Query: 172 ECCFIVLQTWGDRLLHSLELAVKSIEWHYASADWPPMSDMIETQYKIVVLMLVCV 8 ECC VL+TW RL + V++++ A+ ++DMI Y + L L V Sbjct: 954 ECCMDVLETW--RLREGRDATVQALQQALIQAELAAVADMISEMYTTIGLFLADV 1006