BP914099
Clone id YMU001_000039_H02
Library
Length 583
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_H02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTCCCTCCCATTTTACAACACGGGAGAGGTGACCAAAGTGGTGCCTTGATTTGTTTGAG
GCCTTCCACACGGCAACAACAGAGCGACTTTGTGAAGCAATGAGGAGCGGTTTCGTACCG
CATCGTTTAGTACCCATCATCCGGCTTGGGAACGGCGTCCCCCATGGAGTTTTGGACTCC
GAAGAGGACAGATTTTGCTACAAGGCTTTGGATGTGCAGAGGAGCGGATTGACATCGGCT
TGGACGGTACTCTTAGCCCTTGCTATGCACAGTTTATTGTGGAGCTTTGGATTTGTTCGA
GGCCTACCAAAGGGCAAACGTGCGAAGCGGCTATCGACGAAAGAGTTTCGGATTTCAGAG
AGGGATAGCAGATTGTGCGGAGCCCATTGCGTGTGGAGTTCCCTTTGCGGTAGAATTGAA
TCGGCTTGGAGCATGCAGCTTGGTTTGTACGGCCATTTTTTGGAGTGCGAGAAGGTACCC
AATTACCAGATCTTGCAACTTCAATATGTCCCTCCCCTTGCTCGAGGGCCGACGACATCA
ACCAAAAGCTATGGATAACGGATCGTCAACCATCCATTTAATG
■■Homology search results ■■ -
sp_hit_id P35600
Definition sp|P35600|RFC1_DROME Replication factor C subunit 1 OS=Drosophila melanogaster
Align length 85
Score (bit) 31.2
E-value 3.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914099|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_H02.
(583 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P35600|RFC1_DROME Replication factor C subunit 1 OS=Drosophil... 31 3.9
sp|Q6WRH9|IGS10_RAT Immunoglobulin superfamily member 10 OS=Ratt... 31 3.9
sp|Q7MFM6|CATA_VIBVY Catalase OS=Vibrio vulnificus (strain YJ016... 31 5.1
sp|Q8D452|CATA_VIBVU Catalase OS=Vibrio vulnificus GN=VV2_1473 P... 31 5.1
sp|Q87JE8|CATA_VIBPA Catalase OS=Vibrio parahaemolyticus GN=VPA0... 30 6.7
sp|Q9N0V3|ABCBB_RABIT Bile salt export pump OS=Oryctolagus cunic... 30 6.7
sp|Q3SZB8|H3L_BOVIN Histone H3-like OS=Bos taurus PE=2 SV=3 30 8.8

>sp|P35600|RFC1_DROME Replication factor C subunit 1 OS=Drosophila
melanogaster GN=Gnf1 PE=1 SV=2
Length = 986

Score = 31.2 bits (69), Expect = 3.9
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Frame = -1

Query: 247 PSKPMSIRSSAHPKPCSKICP--------LRSPKLHGGRRSQAG*WVLNDAVRNRSSLLH 92
P KP S +S A K P L + H +R+ A VL +NRSS L+
Sbjct: 167 PPKPKSTKSKATTPRVKKEKPAADLESSVLTDEERHERKRASA---VLYQKYKNRSSCLN 223

Query: 91 KVALLLPCGRPQTNQGTTLVTSPVL 17
+ +P G P G T V + VL
Sbjct: 224 PGSKEIPKGSPDCLSGLTFVVTGVL 248


>sp|Q6WRH9|IGS10_RAT Immunoglobulin superfamily member 10 OS=Rattus
norvegicus GN=Igsf10 PE=2 SV=1
Length = 2597

Score = 31.2 bits (69), Expect = 3.9
Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = -1

Query: 256 LRVPSKPMSIRSSAHPKPCSKICPLRSPKLHGGRRS--QAG*WVLNDAVRNRSSLLHKVA 83
L PS P S + S P +I + + K G ++ Q G +N ++ L K+A
Sbjct: 1186 LSTPSIPTSTKFSKRKTPLHQIF-VNNQKKEGMLKNPYQFG------LQKNPAAKLPKIA 1238

Query: 82 LLLPCGRPQTNQGTTLVTSP 23
LLP G+ + TTL+TSP
Sbjct: 1239 PLLPTGQSSPSDSTTLLTSP 1258


>sp|Q7MFM6|CATA_VIBVY Catalase OS=Vibrio vulnificus (strain YJ016)
GN=VVA0294 PE=3 SV=1
Length = 508

Score = 30.8 bits (68), Expect = 5.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3

Query: 453 PFFGVREGTQLPDLATSICPSPCSRADDINQKLWITDRQPS 575
P F +R+ + PD+ S+ PSP + D N+ QPS
Sbjct: 148 PVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPS 188


>sp|Q8D452|CATA_VIBVU Catalase OS=Vibrio vulnificus GN=VV2_1473 PE=3
SV=2
Length = 508

Score = 30.8 bits (68), Expect = 5.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3

Query: 453 PFFGVREGTQLPDLATSICPSPCSRADDINQKLWITDRQPS 575
P F +R+ + PD+ S+ PSP + D N+ QPS
Sbjct: 148 PVFFIRDSIKFPDMVHSLKPSPVTNLQDPNRFFDFFSSQPS 188


>sp|Q87JE8|CATA_VIBPA Catalase OS=Vibrio parahaemolyticus GN=VPA0305
PE=3 SV=2
Length = 504

Score = 30.4 bits (67), Expect = 6.7
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +3

Query: 453 PFFGVREGTQLPDLATSICPSPCSRADDINQKLWITDRQPS 575
P F +R+ + PD+ S+ PSP + D N+ +PS
Sbjct: 148 PVFFIRDSIKFPDMVHSLKPSPVTNVQDPNRFFDFFSHEPS 188


>sp|Q9N0V3|ABCBB_RABIT Bile salt export pump OS=Oryctolagus
cuniculus GN=ABCB11 PE=2 SV=1
Length = 1321

Score = 30.4 bits (67), Expect = 6.7
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = +2

Query: 302 AYQRANVRSGYRRKSFGFQRGIADCAEPIACGVPFAVELNRLGACSLVCTAIFWSARRYP 481
A+Q +R Y RK G DC PF+V+ N++ S AIF P
Sbjct: 168 AHQIQKMRKSYFRKIMRMGIGWVDCNSVGKLNTPFSVDFNKINDSSADQLAIFIQGMTSP 227

Query: 482 I 484
I
Sbjct: 228 I 228


>sp|Q3SZB8|H3L_BOVIN Histone H3-like OS=Bos taurus PE=2 SV=3
Length = 136

Score = 30.0 bits (66), Expect = 8.8
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Frame = +2

Query: 353 FQRGIADCAEPIACGVPF-AVELNRLGACSLVCTAIFWSARRYP-ITRSCNFNMSLPLLE 526
FQR + + A+ + F + + L S +F ++++ + R + N S P LE
Sbjct: 68 FQRLVREIAQDFKTDLKFQSAAIRTLQEASEAYLVVFLESKQHSNLARMYSQNKSFPWLE 127

Query: 527 GRRHQPKAM 553
G+R QP+ M
Sbjct: 128 GKRRQPQPM 136


tr_hit_id A1CZK1
Definition tr|A1CZK1|A1CZK1_NEOFI Forkhead transcription factor (Sep1), putative OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
Align length 112
Score (bit) 39.3
E-value 0.16
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914099|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_H02.
(583 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A1CZK1|A1CZK1_NEOFI Forkhead transcription factor (Sep1), put... 39 0.16
tr|Q0UAS4|Q0UAS4_PHANO Putative uncharacterized protein OS=Phaeo... 34 5.2
tr|Q5X567|Q5X567_LEGPA Putative uncharacterized protein OS=Legio... 34 5.2
tr|A5IBZ0|A5IBZ0_LEGPC Putative uncharacterized protein OS=Legio... 34 5.2
tr|B6KLH0|B6KLH0_TOXGO Putative uncharacterized protein OS=Toxop... 34 6.8
tr|Q0YF50|Q0YF50_9DELT Recombinase OS=Geobacter sp. FRC-32 GN=Ge... 33 9.0

>tr|A1CZK1|A1CZK1_NEOFI Forkhead transcription factor (Sep1),
putative OS=Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181) GN=NFIA_037450 PE=4 SV=1
Length = 724

Score = 39.3 bits (90), Expect = 0.16
Identities = 29/112 (25%), Positives = 45/112 (40%)
Frame = -3

Query: 452 PYKPSCMLQADSILPQRELHTQWAPHNLLSLSEIRNSFVDSRFARLPFGRPRTNPKLHNK 273
P+ P+ +Q +S P LH + ++ + + L +G P P +
Sbjct: 561 PWSPAFRIQDESYTPSDHLHATF---------DVFAESAEEGISTLAYGSPEKRPAKRAR 611

Query: 272 LCIARAKSTVQADVNPLLCTSKAL*QNLSSSESKTPWGTPFPSRMMGTKRCG 117
TV AD+ + SK Q LSS++SK P PS+M R G
Sbjct: 612 TDTENQTGTVLADITSVSVNSKTGMQALSSAKSKGPLFPESPSKMPEHGRFG 663


>tr|Q0UAS4|Q0UAS4_PHANO Putative uncharacterized protein
OS=Phaeosphaeria nodorum GN=SNOG_11140 PE=4 SV=2
Length = 575

Score = 34.3 bits (77), Expect = 5.2
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +3

Query: 288 WICSRPTKGQTCEAAIDERVSDFREG*QIVRSPLRVEFPLR*N*IGLEHAAWFVR 452
W C R + G C+ A D+R D EG ++VR P+ + + ++ AWFVR
Sbjct: 446 WRCCRASYGTLCKIAYDKRNPD-HEGKELVRDPMNGKMYI------VQSIAWFVR 493


>tr|Q5X567|Q5X567_LEGPA Putative uncharacterized protein
OS=Legionella pneumophila (strain Paris) GN=lpp1453 PE=4
SV=1
Length = 602

Score = 34.3 bits (77), Expect = 5.2
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Frame = +1

Query: 94 EAMRSGFVPHRLVPIIRLGNGVPHGVLDSEEDRFCYKALDVQRSGLTSAWTVLLALAMHS 273
E + GF+ H + + +P D E ++ +ALD + G++SA +L+ALA H
Sbjct: 450 ENAQKGFLNH---VVTNKSSLIPSLFSDESELQYWAEALDTGKPGISSASGILMALA-HD 505

Query: 274 LLWSFGFVRGLPKGKRAKRLSTKEFRISERDSRLCG-AHCVWSSLCGRIESAWSMQLGLY 450
L + +G + K L T+ E +L AH + + R Q +
Sbjct: 506 LDLMRCYDKGKFNSLKMKDLVTRLGGNEEAARKLADYAHDLIVATGDRCMGYGVSQDYNF 565

Query: 451 GHFLECEKVPNYQILQLQYVPPLARGPTTSTKSY 552
F +C PN + +LQ VP PT S ++
Sbjct: 566 SLFGQCSLDPNECLKKLQSVPKPETTPTASLTNH 599


>tr|A5IBZ0|A5IBZ0_LEGPC Putative uncharacterized protein
OS=Legionella pneumophila (strain Corby) GN=LPC_0915
PE=4 SV=1
Length = 602

Score = 34.3 bits (77), Expect = 5.2
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 1/154 (0%)
Frame = +1

Query: 94 EAMRSGFVPHRLVPIIRLGNGVPHGVLDSEEDRFCYKALDVQRSGLTSAWTVLLALAMHS 273
E + GF+ H + + +P D E ++ +ALD + G++SA +L+ALA H
Sbjct: 450 ENAQKGFLNH---VVTNKSSLIPSLFSDESELQYWAEALDTGKPGISSASGILMALA-HD 505

Query: 274 LLWSFGFVRGLPKGKRAKRLSTKEFRISERDSRLCG-AHCVWSSLCGRIESAWSMQLGLY 450
L + +G + K L T+ E +L AH + + R Q +
Sbjct: 506 LDLMRCYDKGKFNNLKMKDLVTRLGGNEEAARKLADYAHDLIVATGDRCMGYGVSQDYNF 565

Query: 451 GHFLECEKVPNYQILQLQYVPPLARGPTTSTKSY 552
F +C PN + +LQ VP PT S ++
Sbjct: 566 SLFGQCSLDPNECLKKLQSVPKPETTPTASLTNH 599


>tr|B6KLH0|B6KLH0_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_067760 PE=4 SV=1
Length = 1505

Score = 33.9 bits (76), Expect = 6.8
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = -3

Query: 410 PQRELHTQWAP-HNLL-SLSEIRNSFVDSRFARLPFGRPRTNPKLHNKLCIARAKSTVQA 237
P RE+H + H+LL +LSE+R + V ARL F R P+L +++S+ +
Sbjct: 254 PAREVHAETQKLHSLLETLSELRATVV----ARLDFLRASVPPRLRQADLANKSESSGTS 309

Query: 236 DVNPLLCTSKAL*QNLSSSESKTPWGTPFPSRMMGTKRCGTKPLLIASQ 90
+ L S A SS S +P PS T+ + L A++
Sbjct: 310 SSSACLSPSSAAACRSPSSSSSAALDSPLPSEAEPTEELIAEALAAAAR 358


>tr|Q0YF50|Q0YF50_9DELT Recombinase OS=Geobacter sp. FRC-32
GN=GeobDRAFT_0308 PE=4 SV=1
Length = 613

Score = 33.5 bits (75), Expect = 9.0
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 15/74 (20%)
Frame = -1

Query: 433 CSKPIQFYRKGNSTRNGLRTIC---------------YPSLKSETLSSIAASHVCPLVGL 299
C KP+QF KGN T+ G+ +C YP + LS + ++ L+
Sbjct: 323 CGKPMQFVNKGNQTKAGMYLVCDNARRKMGCEYHSFRYPEFEDAFLSFCSGLNIADLLTD 382

Query: 298 EQIQSSTINCA*QG 257
+ IQ + QG
Sbjct: 383 DAIQKESKIAGLQG 396