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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914104
Clone id YMU001_000039_H07
Library
Length 610
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGAAGGCGCTACTGTCTCACAATTACCAAAGATTCAACAAAAAAAAACAGTTTGAAAGAT
GTTTTTCCCACCAGATACTCTCCTAGACTTTGTCTAAACTTGTATTTTCAGGGAGACAAT
TGAGGTGATTGTCATGTACAAAAGGCTCAACCCACTACAGCATTTCCTAAGAACATTGTA
TTCTCCCTTATCAAGCAAAACTGGGGCTCATAAGAACAATTCTGCCCTATTAACTGTGAG
GATCATATGACCCATCAAACCTGTAGGTTATAAAGTGCTTCGGTTGCAGAAGAGATGCCC
CTGTTCTGACCTATTCAAAAATTCGTCCAAAGATGACATCCAATCAGACTCAAGCTTCCT
CAGGCTGAATTCATTGATGTTGTTGAATAGAATCTAAGATGTGCTCTAGTCTATGCTTCA
TTAAAGGCTGACCAGAATTGGTCCTTTTGAACATCTTAGCCTTCAAATTCTTCCTTGTCT
GCAAGGCTTTTGACCTAACTTCCTCCTTGGCTTTCAAGGCTTCCAGCCTTTCTGCTTTCA
GTCTGTCCTCTTCTTCCTTTTTCTTAACGTAGTCTTTTCTTAAAGCTTCTAGAGCATTCT
TTCCCTTATT
■■Homology search results ■■ -
sp_hit_id Q12247
Definition sp|Q12247|FYV7_YEAST rRNA-processing protein FYV7 OS=Saccharomyces cerevisiae
Align length 75
Score (bit) 36.6
E-value 0.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914104|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_H07.
         (610 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q12247|FYV7_YEAST rRNA-processing protein FYV7 OS=Saccharomyc...    37   0.10 
sp|Q6C4R3|FYV7_YARLI rRNA-processing protein FYV7 OS=Yarrowia li...    36   0.14 
sp|Q6FUQ5|FYV7_CANGA rRNA-processing protein FYV7 OS=Candida gla...    36   0.14 
sp|Q6BPI5|FYV7_DEBHA rRNA-processing protein FYV7 OS=Debaryomyce...    33   1.2  
sp|O14276|FYV7_SCHPO rRNA-processing protein fyv7 OS=Schizosacch...    31   4.4  
sp|Q75CZ6|FYV7_ASHGO rRNA-processing protein FYV7 OS=Ashbya goss...    31   4.4  

>sp|Q12247|FYV7_YEAST rRNA-processing protein FYV7 OS=Saccharomyces
           cerevisiae GN=FYV7 PE=1 SV=1
          Length = 151

 Score = 36.6 bits (83), Expect = 0.10
 Identities = 20/75 (26%), Positives = 37/75 (49%)
 Frame = -1

Query: 607 KGKNALEALRKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQ 428
           +GK  L+  ++   ++K  +                V  +  Q R++ K K+ +RT +GQ
Sbjct: 70  EGKKKLDEKKEIKKQRKRMQKDELNKQRNEQLERIRVSKEKFQRREDRKKKLTQRTRTGQ 129

Query: 427 PLMKHRLEHILDSIQ 383
           PLM  ++E +LD I+
Sbjct: 130 PLMGPKIEDLLDKIK 144


>sp|Q6C4R3|FYV7_YARLI rRNA-processing protein FYV7 OS=Yarrowia
           lipolytica GN=FYV7 PE=3 SV=1
          Length = 229

 Score = 36.2 bits (82), Expect = 0.14
 Identities = 17/39 (43%), Positives = 24/39 (61%)
 Frame = -1

Query: 496 RSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQ 380
           R + L+ R  L  +M K T +GQPLM  R+  ILD ++Q
Sbjct: 191 RERKLKKRAKLTKQMTKTTRTGQPLMTPRINKILDQLKQ 229


>sp|Q6FUQ5|FYV7_CANGA rRNA-processing protein FYV7 OS=Candida
           glabrata GN=FYV7 PE=3 SV=1
          Length = 152

 Score = 36.2 bits (82), Expect = 0.14
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -1

Query: 565 KKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSI 386
           +K+E+ +               +R K  Q R+  + KM KRT SGQPLM  ++E +L  I
Sbjct: 86  RKREQREKLEERRRKEEEKVKIIRQKE-QEREQKRRKMTKRTRSGQPLMAPKIEDLLSKI 144

Query: 385 Q 383
           +
Sbjct: 145 K 145


>sp|Q6BPI5|FYV7_DEBHA rRNA-processing protein FYV7 OS=Debaryomyces
           hansenii GN=FYV7 PE=3 SV=2
          Length = 157

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -1

Query: 490 KALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQ 380
           K  + R+  K  + K+T SGQPLM  R+ ++LD I++
Sbjct: 118 KKSKERERRKDNLSKKTKSGQPLMGPRINNLLDKIKK 154


>sp|O14276|FYV7_SCHPO rRNA-processing protein fyv7
           OS=Schizosaccharomyces pombe GN=fyv7 PE=2 SV=1
          Length = 144

 Score = 31.2 bits (69), Expect = 4.4
 Identities = 11/37 (29%), Positives = 24/37 (64%)
 Frame = -1

Query: 490 KALQTRKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQ 380
           K  + R+  +  + K+T  GQP+M++++ H+L  ++Q
Sbjct: 106 KKQKDREQTRNMLSKKTKRGQPIMRNQINHLLAKVKQ 142


>sp|Q75CZ6|FYV7_ASHGO rRNA-processing protein FYV7 OS=Ashbya
           gossypii GN=FYV7 PE=3 SV=1
          Length = 140

 Score = 31.2 bits (69), Expect = 4.4
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = -1

Query: 580 RKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFK-RTNSGQPLMKHRLE 404
           +K++ ++++ E                 R+K  Q  +  + K  + +T SGQP M  R+ 
Sbjct: 67  KKEHARRRKREQKEEMEAKRQRELDELERAKVRQVERERRNKRIQQKTRSGQPKMGPRIN 126

Query: 403 HILDSIQQ 380
            +LD IQ+
Sbjct: 127 DLLDKIQK 134
tr_hit_id A9RRV9
Definition tr|A9RRV9|A9RRV9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 76
Score (bit) 60.5
E-value 8.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914104|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_H07.
         (610 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RRV9|A9RRV9_PHYPA Predicted protein OS=Physcomitrella paten...    60   8e-08
tr|A7PTZ0|A7PTZ0_VITVI Chromosome chr7 scaffold_31, whole genome...    58   5e-07
tr|A5AML3|A5AML3_VITVI Putative uncharacterized protein OS=Vitis...    58   5e-07
tr|B6TGY6|B6TGY6_MAIZE Putative uncharacterized protein OS=Zea m...    57   6e-07
tr|B6TWT6|B6TWT6_MAIZE Putative uncharacterized protein OS=Zea m...    56   1e-06
tr|Q2QP93|Q2QP93_ORYSJ Os12g0538100 protein OS=Oryza sativa subs...    54   9e-06
tr|A2ZLA2|A2ZLA2_ORYSI Putative uncharacterized protein OS=Oryza...    54   9e-06
tr|Q9ZR13|Q9ZR13_ARATH Putative uncharacterized protein F4C21.10...    45   0.003
tr|B6K061|B6K061_SCHJP Predicted protein OS=Schizosaccharomyces ...    41   0.062
tr|A4RU87|A4RU87_OSTLU Predicted protein OS=Ostreococcus lucimar...    39   0.24 
tr|A7SBI1|A7SBI1_NEMVE Predicted protein OS=Nematostella vectens...    37   1.2  
tr|B3LT38|B3LT38_YEAS1 Protein FYV7 OS=Saccharomyces cerevisiae ...    37   1.2  
tr|A7A0X3|A7A0X3_YEAS7 Conserved protein OS=Saccharomyces cerevi...    37   1.2  
tr|Q01CU7|Q01CU7_OSTTA Chromosome 03 contig 1, DNA sequence OS=O...    35   3.4  
tr|Q5DF97|Q5DF97_SCHJA SJCHGC05159 protein OS=Schistosoma japoni...    34   7.6  
tr|A4I807|A4I807_LEIIN Putative uncharacterized protein OS=Leish...    33   10.0 

>tr|A9RRV9|A9RRV9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_160601 PE=4 SV=1
          Length = 228

 Score = 60.5 bits (145), Expect = 8e-08
 Identities = 31/76 (40%), Positives = 43/76 (56%)
 Frame = -1

Query: 607 KGKNALEALRKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQ 428
           K  + LE LR +Y KKK+EE+                R KA + RK  + K  K T  GQ
Sbjct: 149 KPPSQLERLRSEYEKKKQEEEEVRKEKQALFEEQQAAREKAKKERKEAQNKFRKFTGKGQ 208

Query: 427 PLMKHRLEHILDSIQQ 380
           P+M+HR+EH+L+SIQ+
Sbjct: 209 PVMRHRMEHLLESIQR 224


>tr|A7PTZ0|A7PTZ0_VITVI Chromosome chr7 scaffold_31, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023590001
           PE=4 SV=1
          Length = 196

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 30/75 (40%), Positives = 44/75 (58%)
 Frame = -1

Query: 607 KGKNALEALRKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQ 428
           K K++  +L++ Y KK+EEE+              E R +    RK  + KMFKRT  GQ
Sbjct: 118 KKKDSSHSLKELYEKKREEEERTRIERDAIFQAKKEKRERVESQRKAAREKMFKRTRKGQ 177

Query: 427 PLMKHRLEHILDSIQ 383
           P+MK+R+EH+L +IQ
Sbjct: 178 PVMKYRIEHLLQTIQ 192


>tr|A5AML3|A5AML3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_036656 PE=4 SV=1
          Length = 196

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 31/75 (41%), Positives = 45/75 (60%)
 Frame = -1

Query: 607 KGKNALEALRKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQ 428
           K K++  +L++ Y KK+EEE+              E R +    RK  + KMFKRT  GQ
Sbjct: 118 KKKDSSHSLKELYEKKREEEERTRIERDXIFQAKKEKRERVESQRKAAREKMFKRTRKGQ 177

Query: 427 PLMKHRLEHILDSIQ 383
           P+MK+R+EH+L +IQ
Sbjct: 178 PVMKYRIEHLLQTIQ 192


>tr|B6TGY6|B6TGY6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 202

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 27/71 (38%), Positives = 45/71 (63%)
 Frame = -1

Query: 601 KNALEALRKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQPL 422
           K+ + +L+++Y KK+ EE+              E R K+   RK L+ KMFK+T SGQP+
Sbjct: 128 KHTVHSLKEEYEKKRAEEEKAKEERDAMVQAKREHREKSEAKRKELREKMFKKTRSGQPV 187

Query: 421 MKHRLEHILDS 389
           M++R+EH+L++
Sbjct: 188 MRYRIEHLLET 198


>tr|B6TWT6|B6TWT6_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 202

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 26/71 (36%), Positives = 44/71 (61%)
 Frame = -1

Query: 601 KNALEALRKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQPL 422
           K+ + +L+++Y KK+ EE+              E R K+   RK L+ KMFK+T  GQP+
Sbjct: 128 KHTVHSLKEEYEKKRAEEEKAKEERDAMVQAKREXREKSEAKRKELREKMFKKTRXGQPV 187

Query: 421 MKHRLEHILDS 389
           M++R+EH+L++
Sbjct: 188 MRYRIEHLLET 198


>tr|Q2QP93|Q2QP93_ORYSJ Os12g0538100 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0538100 PE=2 SV=1
          Length = 197

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 25/73 (34%), Positives = 44/73 (60%)
 Frame = -1

Query: 607 KGKNALEALRKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQ 428
           K K    +L ++Y KK+ E++              E R ++   R++L+ KMFK+T SGQ
Sbjct: 118 KKKRVAPSLNEEYEKKRAEDEKAKKEREAIIQAKREERERSEARRRDLREKMFKKTRSGQ 177

Query: 427 PLMKHRLEHILDS 389
           P+MK+R++H+L++
Sbjct: 178 PVMKYRIQHLLET 190


>tr|A2ZLA2|A2ZLA2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_38602 PE=4 SV=1
          Length = 197

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 25/73 (34%), Positives = 44/73 (60%)
 Frame = -1

Query: 607 KGKNALEALRKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQ 428
           K K    +L ++Y KK+ E++              E R ++   R++L+ KMFK+T SGQ
Sbjct: 118 KKKRVAPSLNEEYEKKRAEDEKAKKEREAIIQAKREERERSEARRRDLREKMFKKTRSGQ 177

Query: 427 PLMKHRLEHILDS 389
           P+MK+R++H+L++
Sbjct: 178 PVMKYRIQHLLET 190


>tr|Q9ZR13|Q9ZR13_ARATH Putative uncharacterized protein F4C21.10
           (Putative uncharacterized protein At4g03180) (At4g03180)
           (Putative uncharacterized protein) OS=Arabidopsis
           thaliana GN=AT4g03180 PE=2 SV=1
          Length = 185

 Score = 45.4 bits (106), Expect = 0.003
 Identities = 22/64 (34%), Positives = 36/64 (56%)
 Frame = -1

Query: 571 YVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSGQPLMKHRLEHILD 392
           Y + +EE +              E + +A   RK  K KM ++T  GQP+MK+R+EH+L+
Sbjct: 114 YKQTREEMERVRKEREAMFQAKKEAKEEAESRRKEAKGKMLRKTRHGQPVMKYRIEHLLE 173

Query: 391 SIQQ 380
           SI++
Sbjct: 174 SIKK 177


>tr|B6K061|B6K061_SCHJP Predicted protein OS=Schizosaccharomyces
           japonicus yFS275 GN=SJAG_01250 PE=4 SV=1
          Length = 143

 Score = 40.8 bits (94), Expect = 0.062
 Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
 Frame = -1

Query: 601 KNALEAL---RKDYVKKKEEEDXXXXXXXXXXXXXXEVRSKALQTRKNLKAKMFKRTNSG 431
           KN L+A+   +K+  KK+EEE                   K  + R+  K K+ +RT SG
Sbjct: 70  KNGLQAVFDKQKEARKKREEERLEKLRKKEEI-------QKKKEDREKQKKKLRERTKSG 122

Query: 430 QPLMKHRLEHILDSIQQHQ 374
           QP+MK+++ ++LD I++ Q
Sbjct: 123 QPVMKNQMSYLLDKIKRTQ 141


>tr|A4RU87|A4RU87_OSTLU Predicted protein OS=Ostreococcus
           lucimarinus (strain CCE9901) GN=OSTLU_30534 PE=4 SV=1
          Length = 201

 Score = 38.9 bits (89), Expect = 0.24
 Identities = 17/34 (50%), Positives = 24/34 (70%)
 Frame = -1

Query: 475 RKNLKAKMFKRTNSGQPLMKHRLEHILDSIQQHQ 374
           R++ K  M K+T  GQP+MKHR++ ILD +Q  Q
Sbjct: 165 RQDKKQLMRKKTKRGQPVMKHRVQSILDKLQAEQ 198