BP914107
Clone id YMU001_000039_H10
Library
Length 569
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_H10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTAGAGGATTATTTTGTGCGTGATCATGATGTGACCTGGGAGGGCGACTACGAGGATTCA
TTCGGGTAAATAAGAAGGGTCAGCGGGTATTGCACCACTCTCAAATTGACCTTTTGAAGC
CACTGAAGGCTGCTGCCCAAGCAACTCAAGCTGTCTCAAGGATGAAGCACTTGTCTCATC
AAAAGCAAGAAAAGGAGGAAGAGGTAAAGGAGCCCGAGACAAGTGGAGGAACGGAGACAA
TTGCGGAAGTCGAAGAAGCCATTTCTCCTCTCTGGCAAAGAAGTTGGTTTAGTTTGCGAA
AACGCAAATTGCTAAAATCAATGCCCACTTCTTTCACAAGGGCCGACTGGTGAAGAAATG
TGCGAATTGACATACAATATGCAGAGCATGCCTTATGCTGTTTCTTACCTTGTATATGTA
TGATGTATCTGGGAATCTTGGTGTGTATATGTCACCCGCCCGAATCGTCATCATTTTGTA
TCTAAATGTAGATCGTCATCATTTTGTATCTGAATGTAGAGCTCACCTTGATGCTGGTTT
TCACCTTGCATCTGCATGATCCATCTGGG
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914107|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_H10.
(569 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q6QF41
Definition tr|Q6QF41|Q6QF41_PHYPA Calmodulin-binding ion transporter-like protein OS=Physcomitrella patens
Align length 109
Score (bit) 53.5
E-value 3.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914107|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_H10.
(569 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6QF41|Q6QF41_PHYPA Calmodulin-binding ion transporter-like p... 54 3e-08
tr|Q6QF42|Q6QF42_PHYPA Calmodulin-binding ion transporter-like p... 46 7e-08
tr|B2QFY6|B2QFY6_9BACL Putative uncharacterized protein OS=Exigu... 35 2.2

>tr|Q6QF41|Q6QF41_PHYPA Calmodulin-binding ion transporter-like
protein OS=Physcomitrella patens GN=Camb2 PE=2 SV=1
Length = 428

Score = 53.5 bits (127), Expect(2) = 3e-08
Identities = 42/109 (38%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Frame = +3

Query: 42 GRLRGFIRVNKKGQRVLHHSQIDLLKPLKAAAQATQAVSRMKHLSHXXXXXXXXXXXXXT 221
G FI +N+ GQR+L HS+ID LK K +QA++RM++
Sbjct: 322 GDYEDFIHINRDGQRLLDHSKIDSLKAFKFGGIISQAITRMENDVATRKAREAQAEKEEK 381

Query: 222 SGGTETIAEVEE----AISPLWQRSWF-SLRKRKLLKSMPTSFTRA-DW 350
E+ AEV A P + W SLR RKL KS TSFTRA DW
Sbjct: 382 EKLKESEAEVAAGGPVAFEP--PKQWMNSLRIRKLWKSKSTSFTRAPDW 428



Score = 27.3 bits (59), Expect(2) = 3e-08
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +1

Query: 4 EDYFVRDHDVTWEGDYED 57
ED F DV W+GDYED
Sbjct: 309 EDNFECAGDVVWDGDYED 326


>tr|Q6QF42|Q6QF42_PHYPA Calmodulin-binding ion transporter-like
protein OS=Physcomitrella patens GN=Camb1 PE=2 SV=1
Length = 476

Score = 45.8 bits (107), Expect(2) = 7e-08
Identities = 21/41 (51%), Positives = 26/41 (63%)
Frame = +3

Query: 42 GRLRGFIRVNKKGQRVLHHSQIDLLKPLKAAAQATQAVSRM 164
G FI +N+ GQR+L HS+IDLLK K QA+SRM
Sbjct: 392 GDFEDFIHINEDGQRILDHSKIDLLKTFKVGGIVAQAISRM 432



Score = 33.9 bits (76), Expect(2) = 7e-08
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1

Query: 1 LEDYFVRDHDVTWEGDYED 57
L+DYFV D D+ W+GD+ED
Sbjct: 378 LQDYFVCDGDLVWDGDFED 396


>tr|B2QFY6|B2QFY6_9BACL Putative uncharacterized protein
OS=Exiguobacterium sp. AT1b GN=EAT1bDRAFT_2960 PE=4 SV=1
Length = 249

Score = 35.4 bits (80), Expect = 2.2
Identities = 24/71 (33%), Positives = 34/71 (47%)
Frame = +1

Query: 223 VEERRQLRKSKKPFLLSGKEVGLVCENANC*NQCPLLSQGPTGEEMCELTYNMQSMPYAV 402
V+++R+ +K+K S K+V L E AN + PLL +GP G YN+ M V
Sbjct: 49 VKQKRETKKAKTSVTTSRKQVALAKETANV-STSPLLEKGPEGYWKLPDRYNVDFMHAVV 107

Query: 403 SYLVYV*CIWE 435
V WE
Sbjct: 108 QSPNAVYVCWE 118