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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914108
Clone id YMU001_000039_H11
Library
Length 624
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000039_H11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGAGCAAGGTGATAGACCAAATATATGATACGGTCATCACAATTGAGGCAAAATAGCAA
AGATTTAACATAATTGGAAATACACCTCCAACAAGTTTGAGGATGAAGCTCTATTGGCAA
ACAATTTAACATAATTGGAAATACACCTCCAACAAGTTTGAGGATGAAGTTCTATTGGCA
ACCACCAACCATTGGTAGGCCTCATGGACCTTGATAAAAAAGGTCTTTTGCTTCGATACC
GTTTTTGAAAGAGGTGTTTTGCTTCTATCATGGAAATCCACATCGCATTTGTGTTCGAAG
TGGTCGAAAGCCGGAGAATCGAGCAAGGGCACCAAAGTAAAGAGGATCATATTCTCCAAG
CCATGTTTTCTCTCACCCTTCATGCGTATCTATGCATCAGAGAGTGCAAAATTCATCGCT
TAATTTTTAAGCAAAAGTCTCAGAGGTAATTGAGCATTTACACAAGGCAATTGAAGGCAA
AGGGAGAGCAGGCTTGCTGCTACACAGCTAACATTAGGCCTTGACCTTCAATGGGCAAGA
TCATGAAGATCAAAATTAGCCTTTGCTCACCAATGGCTTCCCTTTTTGCTGACCTTTTGA
ATTGAAACTCCCAGCTATTATCTG
■■Homology search results ■■ -
sp_hit_id P25550
Definition sp|P25550|ASLB_ECOLI Anaerobic sulfatase-maturating enzyme homolog aslB OS=Escherichia coli (strain K12)
Align length 65
Score (bit) 33.1
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914108|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_H11.
         (624 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P25550|ASLB_ECOLI Anaerobic sulfatase-maturating enzyme homol...    33   1.2  
sp|A2ALU4|SHRM2_MOUSE Protein Shroom2 OS=Mus musculus GN=Shroom2...    32   3.4  
sp|P15551|NU4M_STRPU NADH-ubiquinone oxidoreductase chain 4 OS=S...    31   4.5  
sp|Q42967|DCUP_TOBAC Uroporphyrinogen decarboxylase, chloroplast...    31   4.5  

>sp|P25550|ASLB_ECOLI Anaerobic sulfatase-maturating enzyme homolog
           aslB OS=Escherichia coli (strain K12) GN=aslB PE=3 SV=4
          Length = 411

 Score = 33.1 bits (74), Expect = 1.2
 Identities = 22/65 (33%), Positives = 29/65 (44%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD P   H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPPEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189


>sp|A2ALU4|SHRM2_MOUSE Protein Shroom2 OS=Mus musculus GN=Shroom2
           PE=1 SV=1
          Length = 1481

 Score = 31.6 bits (70), Expect = 3.4
 Identities = 18/59 (30%), Positives = 27/59 (45%)
 Frame = +2

Query: 110 SIGKQFNIIGNTPPTSLRMKFYWQPPTIGRPHGP**KRSFASIPFLKEVFCFYHGNPHR 286
           S GK+   +G      L  ++       GRP GP  +  F+ + FLK     YHG+ H+
Sbjct: 382 SSGKEIGNVGYQSEGHLDCRWLCSDDRAGRPSGPPGRLQFSDVHFLKS----YHGSQHQ 436


>sp|P15551|NU4M_STRPU NADH-ubiquinone oxidoreductase chain 4
           OS=Strongylocentrotus purpuratus GN=ND4 PE=3 SV=2
          Length = 463

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 172 LLATTNHW*ASWTLIKKVFCFDTVFERGVLLLSWKS-TSHLCSKWSKAGESSKGTKV 339
           L+   NHW ASW  +  +   DT+    ++L  W +  + + SK      S  G++V
Sbjct: 40  LIVLNNHWTASWHNLSSILASDTISAPLIILSCWLAPIALIASKGQLNNSSDLGSRV 96


>sp|Q42967|DCUP_TOBAC Uroporphyrinogen decarboxylase, chloroplastic
           OS=Nicotiana tabacum GN=DCUP PE=1 SV=1
          Length = 391

 Score = 31.2 bits (69), Expect = 4.5
 Identities = 15/43 (34%), Positives = 25/43 (58%)
 Frame = +1

Query: 289 LCSKWSKAGESSKGTKVKRIIFSKPCFLSPFMRIYASESAKFI 417
           L S   + G S   TK+KR+ F++P  L   ++ +A+  AK+I
Sbjct: 195 LASYVVEGGSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYI 237
tr_hit_id A6NRS2
Definition tr|A6NRS2|A6NRS2_9BACE Putative uncharacterized protein OS=Bacteroides capillosus ATCC 29799
Align length 90
Score (bit) 37.7
E-value 0.56
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914108|Adiantum capillus-veneris mRNA, clone:
YMU001_000039_H11.
         (624 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A6NRS2|A6NRS2_9BACE Putative uncharacterized protein OS=Bacte...    38   0.56 
tr|B8J4N9|B8J4N9_DESDE Aspartate-semialdehyde dehydrogenase OS=D...    36   2.1  
tr|Q8XAQ1|Q8XAQ1_ECO57 Putative arylsulfatase regulator OS=Esche...    35   3.6  
tr|Q83PH6|Q83PH6_SHIFL Putative arylsulfatase regulator OS=Shige...    35   3.6  
tr|Q3YVG6|Q3YVG6_SHISS Putative arylsulfatase regulator OS=Shige...    35   3.6  
tr|Q31UI7|Q31UI7_SHIBS Putative arylsulfatase regulator OS=Shige...    35   3.6  
tr|Q0SYY7|Q0SYY7_SHIF8 Putative arylsulfatase regulator OS=Shige...    35   3.6  
tr|B6I4D4|B6I4D4_ECOSE Putative arylsulfatase regulator OS=Esche...    35   3.6  
tr|B5YY45|B5YY45_ECO5E Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B2TTZ6|B2TTZ6_SHIB3 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|A7ZU01|A7ZU01_ECO24 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B7M5E4|B7M5E4_ECOLX Regulator of arylsulfatase activity OS=Es...    35   3.6  
tr|B7L956|B7L956_ECOLX Regulator of arylsulfatase activity OS=Es...    35   3.6  
tr|B6ZPU8|B6ZPU8_ECO57 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B3X3Y0|B3X3Y0_SHIDY Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B3IAY0|B3IAY0_ECOLX Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B3HAT4|B3HAT4_ECOLX Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B3BG89|B3BG89_ECO57 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B3B7Y9|B3B7Y9_ECO57 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B3ALL3|B3ALL3_ECO57 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B3A0X9|B3A0X9_ECO57 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B2PK50|B2PK50_ECO57 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B2P8F0|B2P8F0_ECO57 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|B2NTQ3|B2NTQ3_ECO57 Arylsulfatase-activating protein AslB OS=...    35   3.6  
tr|Q8CXW6|Q8CXW6_ECOL6 Putative arylsulfatase Regulatory protein...    34   6.2  
tr|Q1R4D9|Q1R4D9_ECOUT Putative arylsulfatase regulatory protein...    34   6.2  
tr|Q0TAS7|Q0TAS7_ECOL5 Putative arylsulfatase regulatory protein...    34   6.2  
tr|B1LLX0|B1LLX0_ECOSM Arylsulfatase-activating protein AslB OS=...    34   6.2  
tr|A1AHW6|A1AHW6_ECOK1 Putative regulator of arylsulfatase activ...    34   6.2  
tr|B8JS92|B8JS92_ECOLX Probable arylsulfatase-activating protein...    34   6.2  

>tr|A6NRS2|A6NRS2_9BACE Putative uncharacterized protein
           OS=Bacteroides capillosus ATCC 29799 GN=BACCAP_00900
           PE=4 SV=1
          Length = 1551

 Score = 37.7 bits (86), Expect = 0.56
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
 Frame = +2

Query: 239 PFLKEVFCFYHGNPHRICVRSGRKPENRARAPK*RGSYSPSHVFSHPSC-----VSMHQR 403
           P+ + +   + G  H   +RS RK  +  +  + RG YSPS  F H SC     V +H R
Sbjct: 20  PWAEHLLFLFSGGRH---IRSARKGASTMKTKRQRGLYSPS--FEHDSCGIGAVVDIHGR 74

Query: 404 VQNSSLNF*AKVSEVIEHLHKAIEGKGRAG 493
             + +++   K+ E +EH      GK  AG
Sbjct: 75  PSHRTVDDALKIVEKLEHR----AGKDAAG 100


>tr|B8J4N9|B8J4N9_DESDE Aspartate-semialdehyde dehydrogenase
           OS=Desulfovibrio desulfuricans subsp. desulfuricans str.
           ATCC 27774 GN=Ddes_2274 PE=4 SV=1
          Length = 348

 Score = 35.8 bits (81), Expect = 2.1
 Identities = 17/66 (25%), Positives = 33/66 (50%)
 Frame = +2

Query: 365 VFSHPSCVSMHQRVQNSSLNF*AKVSEVIEHLHKAIEGKGRAGXXXXXXXXXXTFNGQDH 544
           + ++P+C ++   V    L+  AK+  V+   ++A+ G G+ G           FNG+D 
Sbjct: 124 IIANPNCSTIQMMVALKPLHDAAKIRRVVVSTYQAVSGTGQKGIEELERQVRDLFNGRDP 183

Query: 545 EDQN*P 562
           E++  P
Sbjct: 184 ENKTYP 189


>tr|Q8XAQ1|Q8XAQ1_ECO57 Putative arylsulfatase regulator
           OS=Escherichia coli O157:H7 GN=aslB PE=4 SV=1
          Length = 411

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD PA  H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPAEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189


>tr|Q83PH6|Q83PH6_SHIFL Putative arylsulfatase regulator OS=Shigella
           flexneri GN=aslB PE=4 SV=4
          Length = 411

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD PA  H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPAEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189


>tr|Q3YVG6|Q3YVG6_SHISS Putative arylsulfatase regulator OS=Shigella
           sonnei (strain Ss046) GN=aslB PE=4 SV=1
          Length = 411

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD PA  H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPAEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189


>tr|Q31UI7|Q31UI7_SHIBS Putative arylsulfatase regulator OS=Shigella
           boydii serotype 4 (strain Sb227) GN=aslB PE=4 SV=1
          Length = 411

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD PA  H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPAEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189


>tr|Q0SYY7|Q0SYY7_SHIF8 Putative arylsulfatase regulator OS=Shigella
           flexneri serotype 5b (strain 8401) GN=aslB PE=4 SV=1
          Length = 411

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD PA  H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPAEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189


>tr|B6I4D4|B6I4D4_ECOSE Putative arylsulfatase regulator
           OS=Escherichia coli (strain SE11) GN=ECSE_4080 PE=4 SV=1
          Length = 411

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD PA  H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPAEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189


>tr|B5YY45|B5YY45_ECO5E Arylsulfatase-activating protein AslB
           OS=Escherichia coli O157:H7 (strain EC4115 / EHEC)
           GN=aslB PE=4 SV=1
          Length = 411

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD PA  H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPAEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189


>tr|B2TTZ6|B2TTZ6_SHIB3 Arylsulfatase-activating protein AslB
           OS=Shigella boydii serotype 18 (strain CDC 3083-94 /
           BS512) GN=aslB PE=4 SV=1
          Length = 411

 Score = 35.0 bits (79), Expect = 3.6
 Identities = 23/65 (35%), Positives = 30/65 (46%)
 Frame = -2

Query: 323 LDSPAFDHFEHKCDVDFHDRSKTPLSKTVSKQKTFFIKVHEAYQWLVVANRTSSSNLLEV 144
           LD PA  H +++       +   P  K V +  T   K H  Y  LV  NRTS+   L+V
Sbjct: 130 LDGPAEIHNQYRVT-----KGGRPTHKLVMRALTLLQKHHVDYNVLVCVNRTSAQQPLQV 184

Query: 143 YFQLC 129
           Y  LC
Sbjct: 185 YDFLC 189