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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914111
Clone id YMU001_000042_A04
Library
Length 443
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000042_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TGAATATGTCTATGATGTTTATGCACTCGGAGACAAATCATATGGAGGTGATATGGACAC
ATCAGACTATCCAATGATCCAGGTGATAGATGATGATGATTTTATGTGGGGTGTTCCCCT
GAGTCACAATATGACAGTGAGGACTCGAACGATGAAAATAATCCACTGAATGATTATCCG
GAGGAAGAAGATGATTCAGAAGAGGAGACAGACAGCACCTTGTCACAGTCTGACGTAGCT
GAAGGGAAGCAGGATGTGGTGTCGAATGCATCAGACGAATATGGCTGCGATACTGCAGAG
GAATGGGAAGAGAATTGGGGTAGTGCTTGTTATTACTCTGGCGAGGAGTTGGGATAAAGG
ACGATTTTGATAATGATTCATCTTGAGTCAGCTATTATCTGTGCCATACATCTGCATTGA
ACACTAGAACTGAGCACACTTTA
■■Homology search results ■■ -
sp_hit_id Q07532
Definition sp|Q07532|IWR1_YEAST Putative transcription factor IWR1 OS=Saccharomyces cerevisiae
Align length 20
Score (bit) 30.8
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914111|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_A04.
         (443 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q07532|IWR1_YEAST Putative transcription factor IWR1 OS=Sacch...    31   2.6  
sp|A6UUK5|RRMJ_META3 Ribosomal RNA large subunit methyltransfera...    30   4.5  
sp|A2BDB7|S7A6O_XENLA Protein SLC7A6OS OS=Xenopus laevis GN=slc7...    29   10.0 
sp|Q90837|ERG_CHICK Transcriptional regulator Erg OS=Gallus gall...    29   10.0 

>sp|Q07532|IWR1_YEAST Putative transcription factor IWR1
           OS=Saccharomyces cerevisiae GN=IWR1 PE=1 SV=2
          Length = 353

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 121 ESQYDSEDSNDENNPLNDYP 180
           E++ D EDSNDEN   NDYP
Sbjct: 198 EARSDDEDSNDENYYQNDYP 217


>sp|A6UUK5|RRMJ_META3 Ribosomal RNA large subunit methyltransferase
           J OS=Methanococcus aeolicus (strain Nankai-3 / ATCC
           BAA-1280) GN=rrmJ PE=3 SV=1
          Length = 269

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 12/32 (37%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
 Frame = +2

Query: 14  DVYALGDKSYGGDMD-TSDYPMIQVIDDDDFM 106
           +VY +G K  G   D  +D+P+I++I+D++F+
Sbjct: 195 EVYVIGKKFLGKKFDKNTDFPIIKLIEDNEFL 226


>sp|A2BDB7|S7A6O_XENLA Protein SLC7A6OS OS=Xenopus laevis
           GN=slc7a6os PE=2 SV=1
          Length = 313

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 13/22 (59%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = +1

Query: 118 PESQY-DSEDSNDENNPLNDYP 180
           PE  Y D +D N+ENN  NDYP
Sbjct: 242 PEEIYEDEDDENEENNWRNDYP 263


>sp|Q90837|ERG_CHICK Transcriptional regulator Erg OS=Gallus gallus
           GN=ERG PE=2 SV=1
          Length = 478

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 352 PTPRQSNNKHYPNSLPIPLQYRSHIRLMH-STPHPASL 242
           P P +S+   YP+ LP    Y +H + M+   PHP +L
Sbjct: 400 PHPPESSMYKYPSDLPYMSSYHAHPQKMNFVAPHPPAL 437
tr_hit_id A9SEL9
Definition tr|A9SEL9|A9SEL9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 27
Score (bit) 46.2
E-value 1.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914111|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_A04.
         (443 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9SEL9|A9SEL9_PHYPA Predicted protein OS=Physcomitrella paten...    46   1e-08
tr|A7NY43|A7NY43_VITVI Chromosome chr6 scaffold_3, whole genome ...    42   9e-08
tr|Q8GYP3|Q8GYP3_ARATH Putative uncharacterized protein At2g3028...    35   0.002
tr|O22924|O22924_ARATH Putative uncharacterized protein At2g3028...    35   0.002
tr|A3CEA3|A3CEA3_ORYSJ Putative uncharacterized protein OS=Oryza...    30   0.80 
tr|Q2QYQ0|Q2QYQ0_ORYSJ Os12g0110300 protein OS=Oryza sativa subs...    30   0.80 
tr|B8BNV9|B8BNV9_ORYSI Putative uncharacterized protein OS=Oryza...    30   0.83 
tr|Q2UMP0|Q2UMP0_ASPOR Predicted protein OS=Aspergillus oryzae G...    34   3.1  
tr|B8NNT2|B8NNT2_ASPFL Putative uncharacterized protein OS=Asper...    34   3.1  
tr|B4FGG3|B4FGG3_MAIZE Putative uncharacterized protein OS=Zea m...    34   4.1  
tr|Q29K00|Q29K00_DROPS GA10373 OS=Drosophila pseudoobscura pseud...    33   4.7  
tr|B4GKW7|B4GKW7_DROPE GL25618 OS=Drosophila persimilis GN=GL256...    33   4.7  
tr|B1XL99|B1XL99_SYNP2 Beta-lactamase OS=Synechococcus sp. (stra...    33   7.0  
tr|B8C9P4|B8C9P4_THAPS Predicted protein OS=Thalassiosira pseudo...    33   7.0  
tr|B4KHW1|B4KHW1_DROMO GI18188 OS=Drosophila mojavensis GN=GI181...    33   7.0  
tr|B0EBS2|B0EBS2_ENTDI Putative uncharacterized protein OS=Entam...    33   7.0  
tr|A0E502|A0E502_PARTE Chromosome undetermined scaffold_79, whol...    33   7.0  
tr|B6HT48|B6HT48_PENCH Pc22g08890 protein OS=Penicillium chrysog...    33   7.0  
tr|B5FYZ9|B5FYZ9_TAEGU Putative uncharacterized protein OS=Taeni...    33   9.2  
tr|B4MW89|B4MW89_DROWI GK15214 OS=Drosophila willistoni GN=GK152...    33   9.2  
tr|B3ML58|B3ML58_DROAN GF15473 OS=Drosophila ananassae GN=GF1547...    33   9.2  
tr|A2QFD2|A2QFD2_ASPNC Putative uncharacterized protein OS=Asper...    33   9.2  
tr|A1C617|A1C617_ASPCL Putative uncharacterized protein OS=Asper...    33   9.2  

>tr|A9SEL9|A9SEL9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_164567 PE=4 SV=1
          Length = 374

 Score = 46.2 bits (108), Expect(2) = 1e-08
 Identities = 21/27 (77%), Positives = 21/27 (77%)
 Frame = +1

Query: 100 FYVGCSPESQYDSEDSNDENNPLNDYP 180
           F  G   ES YDSEDSNDENNPLNDYP
Sbjct: 298 FEWGQPGESDYDSEDSNDENNPLNDYP 324



 Score = 36.2 bits (82), Expect(2) = 1e-08
 Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
 Frame = +2

Query: 2   EYVYDVYAL--GDKSYGGDMDTSDYPMIQVIDDDDFMWGVP 118
           +YVYDVYA+  G     G+ D   YP +Q+++ + F WG P
Sbjct: 264 DYVYDVYAMDEGFSDREGE-DEEFYPTVQIVETEGFEWGQP 303


>tr|A7NY43|A7NY43_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00023978001
           PE=4 SV=1
          Length = 355

 Score = 42.4 bits (98), Expect(2) = 9e-08
 Identities = 18/27 (66%), Positives = 23/27 (85%)
 Frame = +1

Query: 100 FYVGCSPESQYDSEDSNDENNPLNDYP 180
           FY G  PES+++S+DSN E+NPLNDYP
Sbjct: 254 FYAG-PPESEFESDDSNAEDNPLNDYP 279



 Score = 37.4 bits (85), Expect(2) = 9e-08
 Identities = 19/42 (45%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
 Frame = +2

Query: 2   EYVYDVYALGDKSYGGDMDT-SDYPMIQVIDDDDFMWGVPLS 124
           EYVYD+YA+ D     D D  + +P++QV +DD+F  G P S
Sbjct: 220 EYVYDLYAVKDDMNITDEDALNPFPLVQVDEDDEFYAGPPES 261


>tr|Q8GYP3|Q8GYP3_ARATH Putative uncharacterized protein At2g30280
           OS=Arabidopsis thaliana GN=At2g30280 PE=2 SV=1
          Length = 346

 Score = 35.4 bits (80), Expect(2) = 0.002
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +1

Query: 115 SPESQYDSEDSNDENNPLNDYP 180
           S ES YDSEDSN E++P  DYP
Sbjct: 257 SDESDYDSEDSNAEDHPKTDYP 278



 Score = 29.6 bits (65), Expect(2) = 0.002
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   EYVYDVYALGDK-SYGGDMDTSDYPMIQVIDDDDFMWG 112
           EYVYD YA+ ++     D   + +P++ V D+++F  G
Sbjct: 219 EYVYDYYAVNEEMDISEDSSKNQFPLVIVEDEEEFCDG 256


>tr|O22924|O22924_ARATH Putative uncharacterized protein At2g30280
           OS=Arabidopsis thaliana GN=At2g30280 PE=4 SV=1
          Length = 294

 Score = 35.4 bits (80), Expect(2) = 0.002
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = +1

Query: 115 SPESQYDSEDSNDENNPLNDYP 180
           S ES YDSEDSN E++P  DYP
Sbjct: 205 SDESDYDSEDSNAEDHPKTDYP 226



 Score = 29.6 bits (65), Expect(2) = 0.002
 Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 2   EYVYDVYALGDK-SYGGDMDTSDYPMIQVIDDDDFMWG 112
           EYVYD YA+ ++     D   + +P++ V D+++F  G
Sbjct: 167 EYVYDYYAVNEEMDISEDSSKNQFPLVIVEDEEEFCDG 204


>tr|A3CEA3|A3CEA3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_033625 PE=4 SV=1
          Length = 335

 Score = 29.6 bits (65), Expect(2) = 0.80
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 121 ESQYDSEDSNDENNPLNDYP 180
           +  Y ++DSN E+NPL DYP
Sbjct: 275 DDPYGTDDSNAEDNPLYDYP 294



 Score = 26.2 bits (56), Expect(2) = 0.80
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +2

Query: 8   VYDVYALGDKSYGGDMD---TSDYPMIQVIDDDD 100
           VYD+Y + +      M+   ++ YP++QV +DDD
Sbjct: 236 VYDIYTVTEVDDDTTMEGTSSAPYPLLQVDNDDD 269


>tr|Q2QYQ0|Q2QYQ0_ORYSJ Os12g0110300 protein OS=Oryza sativa subsp.
           japonica GN=Os12g0110300 PE=2 SV=1
          Length = 330

 Score = 29.6 bits (65), Expect(2) = 0.80
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 121 ESQYDSEDSNDENNPLNDYP 180
           +  Y ++DSN E+NPL DYP
Sbjct: 270 DDPYGTDDSNAEDNPLYDYP 289



 Score = 26.2 bits (56), Expect(2) = 0.80
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +2

Query: 8   VYDVYALGDKSYGGDMD---TSDYPMIQVIDDDD 100
           VYD+Y + +      M+   ++ YP++QV +DDD
Sbjct: 231 VYDIYTVTEVDDDTTMEGTSSAPYPLLQVDNDDD 264


>tr|B8BNV9|B8BNV9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_37198 PE=4 SV=1
          Length = 203

 Score = 29.6 bits (65), Expect(2) = 0.83
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +1

Query: 121 ESQYDSEDSNDENNPLNDYP 180
           +  Y ++DSN E+NPL DYP
Sbjct: 143 DDPYGTDDSNAEDNPLYDYP 162



 Score = 26.2 bits (56), Expect(2) = 0.83
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
 Frame = +2

Query: 8   VYDVYALGDKSYGGDMD---TSDYPMIQVIDDDD 100
           VYD+Y + +      M+   ++ YP++QV +DDD
Sbjct: 104 VYDIYTVKEVDDDTTMEGTSSAPYPLLQVDNDDD 137


>tr|Q2UMP0|Q2UMP0_ASPOR Predicted protein OS=Aspergillus oryzae
           GN=AO090001000682 PE=4 SV=1
          Length = 552

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +1

Query: 121 ESQYDSED--SNDENNPLNDYP 180
           E Q+DSED  SN ENNP NDYP
Sbjct: 461 EDQWDSEDGDSNAENNPANDYP 482


>tr|B8NNT2|B8NNT2_ASPFL Putative uncharacterized protein
           OS=Aspergillus flavus NRRL3357 GN=AFLA_129830 PE=4 SV=1
          Length = 543

 Score = 34.3 bits (77), Expect = 3.1
 Identities = 16/22 (72%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
 Frame = +1

Query: 121 ESQYDSED--SNDENNPLNDYP 180
           E Q+DSED  SN ENNP NDYP
Sbjct: 461 EDQWDSEDGDSNAENNPANDYP 482


>tr|B4FGG3|B4FGG3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 318

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +1

Query: 112 CSPESQYDSEDSNDENNPLNDYP 180
           C  +  YD++DSN E+NPL DYP
Sbjct: 258 CYEDCPYDTDDSNAEDNPLFDYP 280