BP914124
Clone id YMU001_000042_B06
Library
Length 320
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000042_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AGAGAGAAGGTTCTCTACTGATATTTACCGCCTTTAGTACCAAGTAGATCCTTTGTTGCC
AGCATTCAGAATGCCCACCAACAAACTTCTGCACCTTTGGAGTCAGATGGGTCATCTTCG
GTTTTCTCCTCAGGGCCCTTCTCTGGTTTTGCTTTTGACAACGAGGTGTTTCAAGGTCTG
CTGTATTTTCAGAAGATCTTCACGAGGGGAGGTAAAAAAGCCGGTACTTCCCATTACAAT
CAAATCATAGGTAGTCTTGTATCTTTAATCAGTACTTAAAGCTTTTTTTGAGAGCAACAC
ATGTTGCTCTTCTCTTGCCA
■■Homology search results ■■ -
sp_hit_id O35817
Definition sp|O35817|AKA14_RAT A-kinase anchor protein 14 OS=Rattus norvegicus
Align length 28
Score (bit) 31.6
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914124|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_B06.
(320 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O35817|AKA14_RAT A-kinase anchor protein 14 OS=Rattus norvegi... 32 1.3
sp|O33683|Y4337_RHIME Uncharacterized protein RA0937 OS=Rhizobiu... 29 6.3
sp|P42781|XPR6_YARLI Dibasic-processing endoprotease OS=Yarrowia... 29 6.3

>sp|O35817|AKA14_RAT A-kinase anchor protein 14 OS=Rattus norvegicus
GN=Akap14 PE=2 SV=1
Length = 502

Score = 31.6 bits (70), Expect = 1.3
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1

Query: 170 NTSLSKAKPEKGPEEKTEDDPSDSKGAE 87
NTS +KAK + PE K +P DSK E
Sbjct: 17 NTSTAKAKKPEAPEPKNVTEPKDSKAVE 44


>sp|O33683|Y4337_RHIME Uncharacterized protein RA0937 OS=Rhizobium
meliloti GN=RA0937 PE=4 SV=2
Length = 409

Score = 29.3 bits (64), Expect = 6.3
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3

Query: 81 TNFCTFGVRWVI-FGFLLRALLWFCF*QRGVSRSAVFSEDLHEGR*KSRY 227
+N T G WV+ F FL L+W+ + G R+A +ED + + ++Y
Sbjct: 246 SNLETEGTPWVLCFSFLTTVLMWWIYFHDGQQRAADKAEDTSKPQTTAQY 295


>sp|P42781|XPR6_YARLI Dibasic-processing endoprotease OS=Yarrowia
lipolytica GN=XPR6 PE=3 SV=1
Length = 976

Score = 29.3 bits (64), Expect = 6.3
Identities = 13/28 (46%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
Frame = -1

Query: 149 KPEKGPEEK---TEDDPSDSKGAEVCWW 75
KPE+ PEEK D SDS + WW
Sbjct: 819 KPEEKPEEKPVDNSDSSSDSSDSHTSWW 846


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914124|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_B06.
(320 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******