BP914127 |
Clone id |
YMU001_000042_B09 |
Library |
YMU01 |
Length |
279 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000042_B09. |
Accession |
BP914127 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGGTACTCCTGGAAGAATTCGCGGCCTATGCTGATATCAAGATGCCTTCTACATGATGTG AGCAAAGATGTCCAGCCAATCGAGTTATTTTGGAAAGGAATCGTTTCCAATAAGTCCTCA ACTTCATTCAAGCAGCCTACATGGCCAAGTATGTCAACCATGGAATTATAATGCCTGAGT GTGGGTTCAATGCCATGTTTGTCGCGCATAGCATTGAAATGTGTACACCCTTCCTCTAAA AGGCCTTTGTGACTGCAAGCAGCAAGAAGAGAGACAAAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LW32 |
Definition |
sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana |
Align length |
84 |
Score (bit) |
88.2 |
E-value |
1.0e-17 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7R678 |
Definition |
tr|A7R678|A7R678_VITVI Chromosome undetermined scaffold_1179, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
84 |
Score (bit) |
95.1 |
E-value |
2.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914127|Adiantum capillus-veneris mRNA, clone: YMU001_000042_B09. (253 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7R678|A7R678_VITVI Chromosome undetermined scaffold_1179, wh... 95 2e-18 tr|A5BL66|A5BL66_VITVI Putative uncharacterized protein OS=Vitis... 95 2e-18 tr|A7QJF8|A7QJF8_VITVI Chromosome chr8 scaffold_106, whole genom... 93 6e-18 tr|A7PMY8|A7PMY8_VITVI Chromosome chr14 scaffold_21, whole genom... 92 2e-17 tr|A7PRP0|A7PRP0_VITVI Chromosome chr14 scaffold_27, whole genom... 91 3e-17 tr|A7QBJ2|A7QBJ2_VITVI Chromosome chr13 scaffold_74, whole genom... 91 4e-17 tr|A7QDF7|A7QDF7_VITVI Chromosome chr10 scaffold_81, whole genom... 90 6e-17 tr|Q5QNL7|Q5QNL7_ORYSJ Pentatricopeptide repeat protein-like OS=... 89 8e-17 tr|Q0JPS7|Q0JPS7_ORYSJ Os01g0205200 protein (Fragment) OS=Oryza ... 89 8e-17 tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella paten... 89 8e-17 tr|A5B815|A5B815_VITVI Putative uncharacterized protein OS=Vitis... 89 8e-17 tr|A2ZQG6|A2ZQG6_ORYSJ Putative uncharacterized protein OS=Oryza... 89 8e-17 tr|A2WLV2|A2WLV2_ORYSI Putative uncharacterized protein OS=Oryza... 89 8e-17 tr|A7QNZ8|A7QNZ8_VITVI Chromosome chr1 scaffold_135, whole genom... 89 1e-16 tr|A5B772|A5B772_VITVI Putative uncharacterized protein OS=Vitis... 89 1e-16 tr|A7Q7X5|A7Q7X5_VITVI Chromosome chr18 scaffold_61, whole genom... 88 2e-16 tr|A7PQX8|A7PQX8_VITVI Chromosome chr6 scaffold_25, whole genome... 88 2e-16 tr|A5BV08|A5BV08_VITVI Putative uncharacterized protein OS=Vitis... 88 2e-16 tr|Q84TA9|Q84TA9_ORYSJ Os03g0821700 protein OS=Oryza sativa subs... 87 3e-16 tr|Q7XV62|Q7XV62_ORYSJ OSJNBa0006B20.5 protein (Putative unchara... 87 3e-16 tr|B8AU15|B8AU15_ORYSI Putative uncharacterized protein OS=Oryza... 87 3e-16 tr|A7Q7X2|A7Q7X2_VITVI Chromosome chr18 scaffold_61, whole genom... 87 3e-16 tr|A2XNG7|A2XNG7_ORYSI Putative uncharacterized protein OS=Oryza... 87 3e-16 tr|A7Q9R6|A7Q9R6_VITVI Chromosome chr5 scaffold_67, whole genome... 87 5e-16 tr|A7P6T0|A7P6T0_VITVI Chromosome chr9 scaffold_7, whole genome ... 86 1e-15 tr|Q0D4B1|Q0D4B1_ORYSJ Os07g0636900 protein (Fragment) OS=Oryza ... 85 2e-15 tr|B8B274|B8B274_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|B4FHY6|B4FHY6_MAIZE Putative uncharacterized protein OS=Zea m... 85 2e-15 tr|A7Q4W0|A7Q4W0_VITVI Non-specific lipid-transfer protein OS=Vi... 85 2e-15 tr|A7PSC5|A7PSC5_VITVI Chromosome chr14 scaffold_27, whole genom... 85 2e-15
>tr|A7R678|A7R678_VITVI Chromosome undetermined scaffold_1179, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00008013001 PE=4 SV=1 Length = 704
Score = 95.1 bits (235), Expect = 2e-18 Identities = 41/84 (48%), Positives = 59/84 (70%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 F+S+L+AC+H G +EEG +FN M++K IEP HY+ M+D+LG G L+E E+L+ + Sbjct: 448 FISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARM 507
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 PF SIGW SLL +CR H +I + Sbjct: 508 PFNPGSIGWASLLGACRTHGNIEL 531
>tr|A5BL66|A5BL66_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037837 PE=4 SV=1 Length = 719
Score = 95.1 bits (235), Expect = 2e-18 Identities = 41/84 (48%), Positives = 59/84 (70%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 F+S+L+AC+H G +EEG +FN M++K IEP HY+ M+D+LG G L+E E+L+ + Sbjct: 448 FISVLSACAHTGRVEEGWNYFNMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARM 507
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 PF SIGW SLL +CR H +I + Sbjct: 508 PFNPGSIGWASLLGACRTHGNIEL 531
>tr|A7QJF8|A7QJF8_VITVI Chromosome chr8 scaffold_106, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000621001 PE=4 SV=1 Length = 523
Score = 93.2 bits (230), Expect = 6e-18 Identities = 40/84 (47%), Positives = 58/84 (69%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 FV +L AC H GL+EEG F +M + +GI+P + HY MVD+LG GCL E DL++ + Sbjct: 255 FVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKM 314
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 PF+ NS+ W +LL++CR H ++ I Sbjct: 315 PFEANSVIWRALLSACRTHGNVKI 338
>tr|A7PMY8|A7PMY8_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020997001 PE=4 SV=1 Length = 515
Score = 91.7 bits (226), Expect = 2e-17 Identities = 40/84 (47%), Positives = 58/84 (69%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 FV +L ACSH G +EEG +F+ MRD++ IEP +RHY MVD+LG G LNE D ++T+ Sbjct: 346 FVGVLVACSHAGRVEEGRQYFDLMRDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTM 405
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 + N+I W +LL +CR H ++ + Sbjct: 406 KIEPNAIVWRTLLGACRIHGNVEL 429
>tr|A7PRP0|A7PRP0_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022577001 PE=4 SV=1 Length = 745
Score = 90.9 bits (224), Expect = 3e-17 Identities = 39/81 (48%), Positives = 56/81 (69%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 F+ +L AC H GL++EG HF +M +KHGIEP ++HY MVD+LG G LNE E L+E++ Sbjct: 477 FMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESM 536
Query: 72 PFQNNSIGWTSLLTSCRRHLD 10 P + W +LL +C++H D Sbjct: 537 PMAPDVATWGALLGACKKHGD 557
>tr|A7QBJ2|A7QBJ2_VITVI Chromosome chr13 scaffold_74, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00034995001 PE=4 SV=1 Length = 926
Score = 90.5 bits (223), Expect = 4e-17 Identities = 39/84 (46%), Positives = 58/84 (69%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 F+ +L ACSH GL++EG HFN+M K+GI P + HY MVD+LG G L+E E L+E + Sbjct: 658 FLGVLCACSHAGLVDEGWAHFNSMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENM 717
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 P + +S+ W +LL +CR H ++ + Sbjct: 718 PVKPDSVIWEALLGACRIHRNVEL 741
>tr|A7QDF7|A7QDF7_VITVI Chromosome chr10 scaffold_81, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00035822001 PE=4 SV=1 Length = 506
Score = 89.7 bits (221), Expect = 6e-17 Identities = 41/84 (48%), Positives = 57/84 (67%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 FV +L+ACS GLL+EG FN M HGI+PT+ HY MVD+LG VG L E E+L++ + Sbjct: 345 FVCVLSACSRAGLLDEGREMFNLMVHVHGIQPTIEHYGCMVDLLGRVGLLEEAEELVQKM 404
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 P + S+ W SLL +CR H ++ + Sbjct: 405 PQKEASVVWESLLGACRNHGNVEL 428
>tr|Q5QNL7|Q5QNL7_ORYSJ Pentatricopeptide repeat protein-like OS=Oryza sativa subsp. japonica GN=P0451C06.22 PE=4 SV=1 Length = 658
Score = 89.4 bits (220), Expect = 8e-17 Identities = 41/84 (48%), Positives = 56/84 (66%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 F ++L ACSH GL +EG FNAMR++H IEP L+HY MVD+L H G L E + +ET+ Sbjct: 390 FSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETM 449
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 P + +S W SLL CR H ++ + Sbjct: 450 PIEPDSSIWVSLLRGCRIHRNVKL 473
>tr|Q0JPS7|Q0JPS7_ORYSJ Os01g0205200 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os01g0205200 PE=4 SV=1 Length = 667
Score = 89.4 bits (220), Expect = 8e-17 Identities = 41/84 (48%), Positives = 56/84 (66%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 F ++L ACSH GL +EG FNAMR++H IEP L+HY MVD+L H G L E + +ET+ Sbjct: 399 FSAILYACSHSGLRDEGWRFFNAMRNEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETM 458
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 P + +S W SLL CR H ++ + Sbjct: 459 PIEPDSSIWVSLLRGCRIHRNVKL 482
>tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_192620 PE=4 SV=1 Length = 902
Score = 89.4 bits (220), Expect = 8e-17 Identities = 43/84 (51%), Positives = 58/84 (69%) Frame = -2
Query: 252 FVSLLAACSHKGLLEEGCTHFNAMRDKHGIEPTLRHYNSMVDILGHVGCLNEVEDLLETI 73 FVSLL+ACSH GLLEEG +F +M I PT+ HY MVD+LG G L+E E L++T+ Sbjct: 634 FVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALIKTM 693
Query: 72 PFQNNSIGWTSLLTSCRRHLDISI 1 PFQ N+ W +LL +CR H ++ + Sbjct: 694 PFQANTRIWGALLGACRIHGNVPV 717
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