BP914131 |
Clone id |
YMU001_000042_C02 |
Library |
YMU01 |
Length |
397 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000042_C02. |
Accession |
BP914131 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTTCTTTACAGCATTAGCTGTTATTGGATTAAACAGAACCTTCTTCGTCCCCCCACTTTC AAGTGCTTCAGCAACATCCACAGTCAGAAAGCTTGTGCCTTGCCCATGTTCTTCCTCTGA AAAATCTGTTGCAATTACTATTGTCGGGAACTGTACAGATAATGCAAAATTGCGGAGGCA ATGGCAAAGTTTATTCAATAATTCTCGACCATGCACTACTGGTAGGTCATCAATCAAAAG CACCTTGTGCATCTTTGTAAGTCCGCTTTTTAATAAGGGACTCCTATTTCCTTCATTAGT CAGTTTGCGTACAAGTGGAAGCCCGGAGTACTTTTTGACTTTTGAAAGAAAATCAATGAA TTGATCAACTTTTGAAATGTACGGTATATCAGCATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9MBA3 |
Definition |
sp|Q9MBA3|RAD17_ARATH Cell cycle checkpoint protein RAD17 OS=Arabidopsis thaliana |
Align length |
132 |
Score (bit) |
82.0 |
E-value |
8.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q10P97 |
Definition |
tr|Q10P97|Q10P97_ORYSJ Cell cycle checkpoint protein RAD17, putative (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica |
Align length |
132 |
Score (bit) |
84.7 |
E-value |
2.0e-15 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914131|Adiantum capillus-veneris mRNA, clone: YMU001_000042_C02. (397 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q10P97|Q10P97_ORYSJ Cell cycle checkpoint protein RAD17, puta... 85 2e-15 tr|Q0DTK3|Q0DTK3_ORYSJ Os03g0242100 protein OS=Oryza sativa subs... 85 2e-15 tr|B8AJZ8|B8AJZ8_ORYSI Putative uncharacterized protein OS=Oryza... 85 2e-15 tr|A7QDU3|A7QDU3_VITVI Chromosome chr4 scaffold_83, whole genome... 80 5e-14 tr|A5AK19|A5AK19_VITVI Putative uncharacterized protein OS=Vitis... 80 5e-14 tr|B8A2J0|B8A2J0_MAIZE Putative uncharacterized protein OS=Zea m... 73 6e-12 tr|B4FZA8|B4FZA8_MAIZE Putative uncharacterized protein OS=Zea m... 73 6e-12 tr|A9T8M6|A9T8M6_PHYPA Predicted protein OS=Physcomitrella paten... 71 2e-11 tr|Q01A03|Q01A03_OSTTA Kelch repeat:Kelch (ISS) OS=Ostreococcus ... 49 1e-04 tr|A8IWS9|A8IWS9_CHLRE DNA damage checkpoint protein OS=Chlamydo... 46 8e-04 tr|A4RWW3|A4RWW3_OSTLU Predicted protein OS=Ostreococcus lucimar... 42 0.020 tr|A7SP76|A7SP76_NEMVE Predicted protein (Fragment) OS=Nematoste... 41 0.034 tr|Q4V7A2|Q4V7A2_RAT RAD17 homolog (S. pombe) OS=Rattus norvegic... 39 0.13 tr|Q3UYY2|Q3UYY2_MOUSE Putative uncharacterized protein OS=Mus m... 37 0.37 tr|B8ZK91|B8ZK91_STRPN Putative lantibiotic synthetase OS=Strept... 37 0.64 tr|Q0CH77|Q0CH77_ASPTN Putative uncharacterized protein OS=Asper... 37 0.64 tr|B6AVH0|B6AVH0_9RHOB Ribosomal protein L30 OS=Rhodobacterales ... 35 1.4 tr|A8K8X2|A8K8X2_HUMAN cDNA FLJ77610, highly similar to Homo sap... 35 1.4 tr|Q7V184|Q7V184_PROMP Putative uncharacterized protein OS=Proch... 35 1.9 tr|A6QNK6|A6QNK6_BOVIN RAD17 protein OS=Bos taurus GN=RAD17 PE=2... 35 1.9 tr|A9A4Q3|A9A4Q3_NITMS Spermine synthase OS=Nitrosopumilus marit... 35 1.9 tr|A7R4Z8|A7R4Z8_VITVI Chromosome undetermined scaffold_821, who... 34 3.2 tr|B3RII6|B3RII6_TRIAD Putative uncharacterized protein (Fragmen... 34 4.1 tr|A6E2M4|A6E2M4_9RHOB Ribosomal protein L30 OS=Roseovarius sp. ... 33 5.4 tr|A5C3H6|A5C3H6_VITVI Putative uncharacterized protein OS=Vitis... 33 5.4 tr|A8Q7T9|A8Q7T9_MALGO Putative uncharacterized protein OS=Malas... 33 5.4 tr|Q7ZZU6|Q7ZZU6_XENLA RFC-like DNA checkpoint protein Rad17 OS=... 33 7.0 tr|Q7ZTA5|Q7ZTA5_XENLA Rad17 OS=Xenopus laevis GN=rad17 PE=2 SV=1 33 7.0 tr|Q6INE0|Q6INE0_XENLA Rad17 protein OS=Xenopus laevis GN=rad17 ... 33 7.0 tr|Q4SDG1|Q4SDG1_TETNG Chromosome undetermined SCAF14638, whole ... 33 7.0
>tr|Q10P97|Q10P97_ORYSJ Cell cycle checkpoint protein RAD17, putative (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=LOC_Os03g13850 PE=4 SV=1 Length = 643
Score = 84.7 bits (208), Expect = 2e-15 Identities = 44/132 (33%), Positives = 74/132 (56%) Frame = -2
Query: 396 NADIPYISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKMHKVLLIDDLPV 217 N+ + YISK+++F +F+ K++KYS L TN G++ + H ++LIDD+PV Sbjct: 215 NSGLGYISKLEEFENFVEKIRKYSLL----SPTNFGSQ---------RKHTIILIDDIPV 261
Query: 216 VHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQGTSFLTVDVAEALESGGTKKV 37 G+ +L CL S Q PT++ T + + E+ + + D+ L+S G K+ Sbjct: 262 TSGKVSFARLGKCLTGLIQSTQVPTVISLTQYHKSENNDTAMWNSEDLESLLQSAGAHKI 321
Query: 36 LFNPITANAVKK 1 FNP+T N++KK Sbjct: 322 SFNPVTVNSIKK 333
>tr|Q0DTK3|Q0DTK3_ORYSJ Os03g0242100 protein OS=Oryza sativa subsp. japonica GN=Os03g0242100 PE=4 SV=1 Length = 676
Score = 84.7 bits (208), Expect = 2e-15 Identities = 44/132 (33%), Positives = 74/132 (56%) Frame = -2
Query: 396 NADIPYISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKMHKVLLIDDLPV 217 N+ + YISK+++F +F+ K++KYS L TN G++ + H ++LIDD+PV Sbjct: 248 NSGLGYISKLEEFENFVEKIRKYSLL----SPTNFGSQ---------RKHTIILIDDIPV 294
Query: 216 VHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQGTSFLTVDVAEALESGGTKKV 37 G+ +L CL S Q PT++ T + + E+ + + D+ L+S G K+ Sbjct: 295 TSGKVSFARLGKCLTGLIQSTQVPTVISLTQYHKSENNDTAMWNSEDLESLLQSAGAHKI 354
Query: 36 LFNPITANAVKK 1 FNP+T N++KK Sbjct: 355 SFNPVTVNSIKK 366
>tr|B8AJZ8|B8AJZ8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10706 PE=4 SV=1 Length = 403
Score = 84.7 bits (208), Expect = 2e-15 Identities = 44/132 (33%), Positives = 74/132 (56%) Frame = -2
Query: 396 NADIPYISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKMHKVLLIDDLPV 217 N+ + YISK+++F +F+ K++KYS L TN G++ + H ++LIDD+PV Sbjct: 173 NSGLGYISKLEEFENFVEKIRKYSLL----SPTNFGSQ---------RKHTIILIDDIPV 219
Query: 216 VHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQGTSFLTVDVAEALESGGTKKV 37 G+ +L CL S Q PT++ T + + E+ + + D+ L+S G K+ Sbjct: 220 TSGKVSFARLGKCLTGLIQSTQVPTVISLTQYHKSENNDTAMWNSEDLESLLQSAGAHKI 279
Query: 36 LFNPITANAVKK 1 FNP+T N++KK Sbjct: 280 SFNPVTVNSIKK 291
>tr|A7QDU3|A7QDU3_VITVI Chromosome chr4 scaffold_83, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036744001 PE=4 SV=1 Length = 605
Score = 80.1 bits (196), Expect = 5e-14 Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 2/134 (1%) Frame = -2
Query: 396 NADIPYISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKMHKVLLIDDLPV 217 N+ I Y SK+D+F F+ +++KY +P P +G +K +LLIDDLPV Sbjct: 176 NSGIRYTSKLDEFESFVERMRKYGLIP------------PSF-AGESKSSVILLIDDLPV 222
Query: 216 VHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQ--GTSFLTVDVAEALESGGTK 43 +G +L +CL+ A S Q PT ++ TD+ + + T+ ++ +LE+ G Sbjct: 223 TNGNASYRRLRNCLQLLAQSTQIPTAILITDYGKADSADNIATARCLEELQLSLENAGAC 282
Query: 42 KVLFNPITANAVKK 1 K+ FNPIT+N++KK Sbjct: 283 KIAFNPITSNSIKK 296
>tr|A5AK19|A5AK19_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_009206 PE=4 SV=1 Length = 1125
Score = 80.1 bits (196), Expect = 5e-14 Identities = 46/134 (34%), Positives = 75/134 (55%), Gaps = 2/134 (1%) Frame = -2
Query: 396 NADIPYISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKMHKVLLIDDLPV 217 N+ I Y SK+D+F F+ +++KY +P P +G +K +LLIDDLPV Sbjct: 257 NSGIRYTSKLDEFESFVERMRKYGLIP------------PSF-AGESKSSVILLIDDLPV 303
Query: 216 VHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQ--GTSFLTVDVAEALESGGTK 43 +G +L +CL+ A S Q PT ++ TD+ + + T+ ++ +LE+ G Sbjct: 304 TNGNASYRRLRNCLQLLAQSTQIPTAILITDYGKADSADNIATARCLEELQLSLENAGAC 363
Query: 42 KVLFNPITANAVKK 1 K+ FNPIT+N++KK Sbjct: 364 KIAFNPITSNSIKK 377
>tr|B8A2J0|B8A2J0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 614
Score = 73.2 bits (178), Expect = 6e-12 Identities = 41/132 (31%), Positives = 68/132 (51%) Frame = -2
Query: 396 NADIPYISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKMHKVLLIDDLPV 217 N+ + Y SK+++F F+ K++KYS L TN ++ L+ ++LIDD+PV Sbjct: 188 NSGLRYTSKLEEFETFVEKIRKYSMLCP----TNTRSQRNLI---------IILIDDIPV 234
Query: 216 VHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQGTSFLTVDVAEALESGGTKKV 37 G +L CL S Q PT++ T + + E + + D+ L+ G K+ Sbjct: 235 TSGNVAFARLGKCLTGLIRSTQVPTVISLTHYHKSESNDTAMWNSEDLESLLQDAGAHKI 294
Query: 36 LFNPITANAVKK 1 FNP+T N++KK Sbjct: 295 GFNPVTTNSIKK 306
>tr|B4FZA8|B4FZA8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 598
Score = 73.2 bits (178), Expect = 6e-12 Identities = 41/132 (31%), Positives = 68/132 (51%) Frame = -2
Query: 396 NADIPYISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKMHKVLLIDDLPV 217 N+ + Y SK+++F F+ K++KYS L TN ++ L+ ++LIDD+PV Sbjct: 172 NSGLRYTSKLEEFETFVEKIRKYSMLCP----TNTRSQRNLI---------IILIDDIPV 218
Query: 216 VHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQGTSFLTVDVAEALESGGTKKV 37 G +L CL S Q PT++ T + + E + + D+ L+ G K+ Sbjct: 219 TSGNVAFARLGKCLTGLIRSTQVPTVISLTHYHKSESNDTAMWNSEDLESLLQDAGAHKI 278
Query: 36 LFNPITANAVKK 1 FNP+T N++KK Sbjct: 279 GFNPVTTNSIKK 290
>tr|A9T8M6|A9T8M6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_141878 PE=4 SV=1 Length = 501
Score = 71.2 bits (173), Expect = 2e-11 Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Frame = -2
Query: 381 YISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKMHKVLLIDDLPVVHGRE 202 Y SK+D+F F+ +K+ LP+ + + + K LLI+DLP V+ Sbjct: 135 YTSKLDEFEAFVENARKFPVLPVESNMDSP------------RKVKALLIEDLPQVNDAA 182
Query: 201 LLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQGTS-FLTVDVAEALESGGTKKVLFNP 25 +LC+ L SV F T+VI TD E+ G+ T + +V + LE G K++FNP Sbjct: 183 QTQQLCNLLLALVRSVCFITVVIMTDVVEDGGGRNTRLWKHREVQQTLEGAGATKIVFNP 242
Query: 24 ITANAVKK 1 +TAN++K+ Sbjct: 243 VTANSIKR 250
>tr|Q01A03|Q01A03_OSTTA Kelch repeat:Kelch (ISS) OS=Ostreococcus tauri GN=Ot05g00170 PE=4 SV=1 Length = 1055
Score = 48.9 bits (115), Expect = 1e-04 Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 10/139 (7%) Frame = -2
Query: 387 IPYISKVDQFIDFLSKVKKYSGLPLVRKLTNEGNRSPLLKSGLTKM----HKVLLIDDLP 220 + Y SKVD+F+ + S+ KY+ L L T G T M VLLI D+P Sbjct: 104 VEYSSKVDEFVAYCSRATKYAPLALTLTSTKTNESDGRSGGGTTSMMASRKVVLLIRDIP 163
Query: 219 V--VHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEE----EHGQGTSFLTVDVAEALE 58 +GR ++ LR A S P + + EE G+ DV +E Sbjct: 164 SSDANGRA---RVLEALRALAASRGGPPVAVVVTEEEERGGHRSGRSAEISAKDVRSVME 220
Query: 57 SGGTKKVLFNPITANAVKK 1 G + V FN T A+ K Sbjct: 221 KAGAQIVDFNAATTAAITK 239
>tr|A8IWS9|A8IWS9_CHLRE DNA damage checkpoint protein OS=Chlamydomonas reinhardtii GN=RAD17 PE=4 SV=1 Length = 1026
Score = 46.2 bits (108), Expect = 8e-04 Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 18/100 (18%) Frame = -2
Query: 246 KVLLIDDLPVVHGRELLNKLCHCLRNFALSVQFPTIVIATDFSEEEHGQ----------- 100 K+LL++DLP H E +L LR+ A + P ++IAT+ G Sbjct: 427 KLLLLEDLPHTHDMERRQRLAAALRDLAACARGPIVLIATEVEGGASGSGPGGGGGGGGG 486
Query: 99 -------GTSFLTVDVAEALESGGTKKVLFNPITANAVKK 1 G L D+ AL++ + FNP+TAN + K Sbjct: 487 GDGGSMGGARGLHKDLLAALDAASAHTISFNPVTANNISK 526
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