BP914136
Clone id YMU001_000042_C09
Library
Length 420
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000042_C09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTTTTTCAAACCAAAAACTTGCGCAACACCTCAATTACAATTAATG
AAATTGACAGGAGCTGATCCAGCCATTTCTTTAATGGTGGAGGACCCAGCAGACATGCAT
TGAAAGCATGTAAAAAGCCACTCCTGACAGAAAGAATCAAGAATCCTCCTAAACCCTAGT
ACCCAAATAGAAAGTGAAATGTTTGCGACCTCCCAATACATACATAAGTGCGGTGCAGGG
ATGGCTGGATACTCTACAAGAATAAATTGAATACAGAGAATCTCGGGTAAAGATGGCGAC
GACTAAAGGCTGCTAAACTAGGCTTTATGTACTCATCCCGCATCTGCACTTAGATCACTT
GGCCTGTACAGAAATCTGGACAACTCAACACGATATGTACACTTGCCTGCAGCCCTACCG
■■Homology search results ■■ -
sp_hit_id Q6P1W0
Definition sp|Q6P1W0|DTL_XENTR Denticleless protein homolog OS=Xenopus tropicalis
Align length 49
Score (bit) 30.0
E-value 3.7
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914136|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_C09.
(400 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6P1W0|DTL_XENTR Denticleless protein homolog OS=Xenopus trop... 30 3.7
sp|Q3Z8C6|ADEC_DEHE1 Adenine deaminase OS=Dehalococcoides etheno... 30 4.9
sp|Q6WRH9|IGS10_RAT Immunoglobulin superfamily member 10 OS=Ratt... 29 6.4

>sp|Q6P1W0|DTL_XENTR Denticleless protein homolog OS=Xenopus
tropicalis GN=dtl PE=1 SV=1
Length = 713

Score = 30.0 bits (66), Expect = 3.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -1

Query: 268 TRDSLYSIYSCRVSSHPCTALMYVLGGRKHFTFYLGTRV*EDS*FFLSG 122
T D++Y + + + P + V GG ++ TFY+ T V D F LSG
Sbjct: 292 TDDNVYMFNATGLKTEPVS----VFGGHQNSTFYIKTSVSPDGQFLLSG 336


>sp|Q3Z8C6|ADEC_DEHE1 Adenine deaminase OS=Dehalococcoides
ethenogenes (strain 195) GN=ade PE=3 SV=1
Length = 571

Score = 29.6 bits (65), Expect = 4.9
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 12/93 (12%)
Frame = +2

Query: 146 LLNPSTQIESEMFATSQYIHKCGA-GMAGYSTRIN*IQRISGKDGDD*RL---------- 292
L+N T +ES M SQY A G + T ++ I + GK+G D L
Sbjct: 71 LINGHTHVESSMLDISQYARAVIAHGTSALITDLHEISNVCGKEGIDYVLSASADLPLNI 130

Query: 293 -LN*ALCTHPASALRSLGLYRNLDNSTRYVHLP 388
L C PA+ L + G N ++ T + LP
Sbjct: 131 FLQVPSCV-PATHLETAGAEINSNDVTELLRLP 162


>sp|Q6WRH9|IGS10_RAT Immunoglobulin superfamily member 10 OS=Rattus
norvegicus GN=Igsf10 PE=2 SV=1
Length = 2597

Score = 29.3 bits (64), Expect = 6.4
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -3

Query: 308 IKPSLAAFSRRHLYPRFSVFNLFL*SIQPSLHRTYVCIGRSQT 180
+KP SR LYP + L++ SI PS+ TY CI S +
Sbjct: 1858 LKPLQLTHSRFFLYPNGT---LYIRSIAPSVRGTYECIATSSS 1897


tr_hit_id Q6RCF3
Definition tr|Q6RCF3|Q6RCF3_9CAUD Putative uncharacterized protein OS=Vibrio phage VP2
Align length 63
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914136|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_C09.
(400 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6RCF3|Q6RCF3_9CAUD Putative uncharacterized protein OS=Vibri... 33 5.4

>tr|Q6RCF3|Q6RCF3_9CAUD Putative uncharacterized protein OS=Vibrio
phage VP2 PE=4 SV=1
Length = 594

Score = 33.5 bits (75), Expect = 5.4
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = -2

Query: 240 LVEYPAIPAPHLCMYWEVANISLSIWVLGFRRILDSFCQEWLFTCFQCMSAGSSTIKEMA 61
L PA+ AP + EV N ++++WV R+++ + EW T + +A TI + A
Sbjct: 64 LFRLPAVDAPSNDVIVEVGNTNIAVWVNDVRQVVANTPSEWRNTIDRIQTA-YDTIGDDA 122

Query: 60 GSA 52
G+A
Sbjct: 123 GAA 125