BP914142 |
Clone id |
YMU001_000042_D05 |
Library |
YMU01 |
Length |
344 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000042_D05. |
Accession |
BP914142 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACAAAGTTGTCCACATGCTGCTTGTGAAATCCATAGTCTATGAAGGAGGCTGAAGCCACA CAAAAAATCCCCTGCTACAAGGGAGGAGCTATGACCTCCAACAAAATTCTCATGGCATCA CCAAATTCAAAGCCAGACACCAGAAACATAAGTCCTTCACTCAACAAGAACCTGTTTATC CACCACCACCAACATAAGTCTTCACTCAACAAGAACCTGTTTATCCACCACCACAAATCC AAACGTGAGATCCATCATTTAAAAGCATCCACATGCTGCTTGTGAAGTCCATTCATTCAT TCAACAACATCTACCGTCCATAAACTACACATTGCCTTGCTGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
O36019 |
Definition |
sp|O36019|ATG13_SCHPO Autophagy protein 13 OS=Schizosaccharomyces pombe |
Align length |
45 |
Score (bit) |
32.7 |
E-value |
0.57 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7NX90 |
Definition |
tr|A7NX90|A7NX90_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
63 |
Score (bit) |
36.2 |
E-value |
0.84 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914142|Adiantum capillus-veneris mRNA, clone: YMU001_000042_D05. (344 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7NX90|A7NX90_VITVI Chromosome chr5 scaffold_2, whole genome ... 36 0.84 tr|Q4Z7D7|Q4Z7D7_PLABE Putative uncharacterized protein OS=Plasm... 36 0.84 tr|B4JJ03|B4JJ03_DROGR GH12421 OS=Drosophila grimshawi GN=GH1242... 36 1.1 tr|Q8IJI3|Q8IJI3_PLAF7 Putative uncharacterized protein OS=Plasm... 35 1.9 tr|Q1LWP7|Q1LWP7_DANRE Novel protein similar to vertebrate HLA-B... 35 2.4 tr|Q7QEC7|Q7QEC7_ANOGA AGAP000713-PA (Fragment) OS=Anopheles gam... 35 2.4 tr|B7FWD4|B7FWD4_PHATR Predicted protein OS=Phaeodactylum tricor... 34 3.2 tr|B6MTK6|B6MTK6_BRAFL Putative uncharacterized protein OS=Branc... 34 3.2 tr|B0V356|B0V356_DANRE Novel protein similar to thymocyte select... 34 4.2 tr|Q7QIS2|Q7QIS2_ANOGA AGAP007038-PA OS=Anopheles gambiae GN=AGA... 34 4.2 tr|Q7PQW5|Q7PQW5_ANOGA AGAP002711-PA (Fragment) OS=Anopheles gam... 34 4.2 tr|A4H3R7|A4H3R7_LEIBR Putative uncharacterized protein OS=Leish... 34 4.2 tr|B8FFV1|B8FFV1_9DELT FecR protein OS=Desulfatibacillum alkeniv... 33 5.4 tr|A5K7A2|A5K7A2_PLAVI Putative uncharacterized protein OS=Plasm... 33 5.4 tr|B0XDX3|B0XDX3_CULQU Putative uncharacterized protein OS=Culex... 33 7.1 tr|Q5A9C6|Q5A9C6_CANAL Putative uncharacterized protein OS=Candi... 33 7.1 tr|Q587L5|Q587L5_ONCKE Peroxisome proliferator-activated recepto... 33 9.3 tr|A1XK80|A1XK80_9LILI RNA polymerase beta chain (Fragment) OS=T... 33 9.3 tr|Q7PDP7|Q7PDP7_PLAYO ERYTHROCYTE MEMBRANE PROTEIN PFEMP3 OS=Pl... 33 9.3 tr|B4N9F6|B4N9F6_DROWI GK11610 OS=Drosophila willistoni GN=GK116... 33 9.3 tr|A4RJ57|A4RJ57_MAGGR Putative uncharacterized protein OS=Magna... 33 9.3
>tr|A7NX90|A7NX90_VITVI Chromosome chr5 scaffold_2, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020228001 PE=4 SV=1 Length = 250
Score = 36.2 bits (82), Expect = 0.84 Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 16/63 (25%) Frame = -1
Query: 287 LHKQHVDAFK*WI--SRLDLWWWI-------NRFLLSEDLCWWWWI-------NRFLLSE 156 LH++ V F+ W+ RL LWWW+ R+LL L WWW+ R+LL Sbjct: 175 LHRRLV--FRRWLLHRRLMLWWWLLHRRLVFRRWLLHRRLMLWWWLLHRRLVFRRWLLHR 232
Query: 155 GLM 147 LM Sbjct: 233 RLM 235
Score = 35.0 bits (79), Expect = 1.9 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 9/57 (15%) Frame = -1
Query: 287 LHKQHVDAFK*WI--SRLDLWWWINRFLLSEDLCWWWWI-------NRFLLSEGLMF 144 LH++ V F+ W+ RL LWWW LL L WWW+ R+LL L+F Sbjct: 98 LHRRLV--FRRWLLYRRLMLWWW----LLHRRLMLWWWLLHRRLVFRRWLLHRRLVF 148
Score = 34.3 bits (77), Expect = 3.2 Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 9/56 (16%) Frame = -1
Query: 287 LHKQHVDAFK*WI--SRLDLWWWINRFLLSEDLCWWWWI-------NRFLLSEGLM 147 LH++ V F+ W+ RL LWWW LL L WWW+ R+LL LM Sbjct: 142 LHRRLV--FRRWLLHRRLVLWWW----LLHRRLMLWWWLLHRRLVFRRWLLHRRLM 191
Score = 33.9 bits (76), Expect = 4.2 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = -1
Query: 287 LHKQHVDAFK*WI--SRLDLWWWINRFLLSEDLCWWWWINRFLL 162 LH++ V F+ W+ RL LWWW+ L + WWW ++R L+ Sbjct: 54 LHRRLV--FRRWLLHRRLMLWWWL---LHRRLMLWWWLLHRRLM 92
>tr|Q4Z7D7|Q4Z7D7_PLABE Putative uncharacterized protein OS=Plasmodium berghei GN=PB000131.00.0 PE=4 SV=1 Length = 445
Score = 36.2 bits (82), Expect = 0.84 Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 2/71 (2%) Frame = +1
Query: 43 KEAEATQKIPCYKGGAMTSNKILMASPNSKPDTRNISPSLNKNLFIHHH--QHKSSLNKN 216 KE ++ P K M+S ++L+ K +N+ P+LNKN+ ++ +H S+ K+ Sbjct: 249 KEEPLSKDKPQNKKRPMSSLELLIMENEEKKKLKNLLPNLNKNINANNSKTEHAHSITKH 308
Query: 217 LFIHHHKSKRE 249 + +H K K++ Sbjct: 309 MNENHEKRKKD 319
>tr|B4JJ03|B4JJ03_DROGR GH12421 OS=Drosophila grimshawi GN=GH12421 PE=4 SV=1 Length = 315
Score = 35.8 bits (81), Expect = 1.1 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = +1
Query: 85 GAMTSNKILMASPN-SKPDTRNISPSLNKNLFIHHHQHKSSLNKNLFIHHHKSKREIHH 258 G+ +SN IL + S + N SP+ K HHH H S + + +HHH ++HH Sbjct: 89 GSCSSNAILTETAGTSNSSSGNSSPA--KAYVQHHHLHHGSHSHSHTLHHHHHSLQLHH 145
>tr|Q8IJI3|Q8IJI3_PLAF7 Putative uncharacterized protein OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0214 PE=4 SV=1 Length = 1434
Score = 35.0 bits (79), Expect = 1.9 Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 1/75 (1%) Frame = +1
Query: 37 SMKEAEATQKIPCYKGGAMTSNKILMASPNS-KPDTRNISPSLNKNLFIHHHQHKSSLNK 213 S+ E Q IP K +T N+I +P+S T+NIS LN + + + + NK Sbjct: 1044 SVDEKNERQNIPTEKNIELTINRIRNETPSSFNEKTKNISSFLNDIWYNNGNNNIIMYNK 1103
Query: 214 NLFIHHHKSKREIHH 258 N +H + + I H Sbjct: 1104 NSNVHDNNNNNNIIH 1118
>tr|Q1LWP7|Q1LWP7_DANRE Novel protein similar to vertebrate HLA-B associated transcript 2 (BAT2) OS=Danio rerio GN=bat2 PE=4 SV=1 Length = 1921
Score = 34.7 bits (78), Expect = 2.4 Identities = 18/66 (27%), Positives = 34/66 (51%) Frame = +1
Query: 37 SMKEAEATQKIPCYKGGAMTSNKILMASPNSKPDTRNISPSLNKNLFIHHHQHKSSLNKN 216 S+++A +T +P +N + +PNS ++ N++ N+N HHH H +++ Sbjct: 1711 SLQQANSTPNVP--DAVVANANHSVSTTPNSNNNSSNLAGG-NQNFNSHHHHHYQGNSQS 1767
Query: 217 LFIHHH 234 HHH Sbjct: 1768 HPQHHH 1773
>tr|Q7QEC7|Q7QEC7_ANOGA AGAP000713-PA (Fragment) OS=Anopheles gambiae GN=AGAP000713 PE=4 SV=4 Length = 364
Score = 34.7 bits (78), Expect = 2.4 Identities = 17/59 (28%), Positives = 27/59 (45%) Frame = +1
Query: 82 GGAMTSNKILMASPNSKPDTRNISPSLNKNLFIHHHQHKSSLNKNLFIHHHKSKREIHH 258 GG + S+ P++ + +L + HHH H S L++N HHH +HH Sbjct: 296 GGLVVSSAACALFPDAPTTPKVSRKALPHHNHHHHHHHSSHLHQN---HHHHHHNHLHH 351
>tr|B7FWD4|B7FWD4_PHATR Predicted protein OS=Phaeodactylum tricornutum CCAP 1055/1 GN=PHATRDRAFT_45072 PE=4 SV=1 Length = 947
Score = 34.3 bits (77), Expect = 3.2 Identities = 19/41 (46%), Positives = 25/41 (60%) Frame = +2
Query: 128 QSQTPET*VLHSTRTCLSTTTNISLHSTRTCLSTTTNPNVR 250 Q+ +P T V +T T +STT+ S ST T STT+ P VR Sbjct: 120 QATSPRTFVSSATSTSISTTSASSTSSTTTTSSTTSLPKVR 160
>tr|B6MTK6|B6MTK6_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae GN=BRAFLDRAFT_86535 PE=4 SV=1 Length = 3573
Score = 34.3 bits (77), Expect = 3.2 Identities = 22/75 (29%), Positives = 38/75 (50%) Frame = +1
Query: 58 TQKIPCYKGGAMTSNKILMASPNSKPDTRNISPSLNKNLFIHHHQHKSSLNKNLFIHHHK 237 T++ P G + +MASP S PD + ++ + + + + S + + F HHH Sbjct: 3210 TRRQPSVSGLDDDDDDDVMASPPSSPDLKAVTDLMEE---LSDSEIISEDSTDPFGHHHS 3266
Query: 238 SKREIHHLKASTCCL 282 S+ EI LKAS+ + Sbjct: 3267 SQHEISPLKASSSAI 3281
>tr|B0V356|B0V356_DANRE Novel protein similar to thymocyte selection-associated high mobility group box (TOX) OS=Danio rerio GN=CH211-198J13.2-001 PE=4 SV=1 Length = 539
Score = 33.9 bits (76), Expect = 4.2 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +1
Query: 79 KGGAMTSNKILMAS-PNSKPDTRNISPSLNKNLFIHHHQHKSSLNKNLFIHHHKSKREIH 255 +GGA + M+S S P ISP L+++L +HH Q + + + H S + Sbjct: 421 RGGASRPGAVSMSSMTGSSPPPLQISPPLHQHLSLHHQQQQQQIGSHTLALHSPSMAQGF 480
Query: 256 HLKA 267 L+A Sbjct: 481 PLQA 484
>tr|Q7QIS2|Q7QIS2_ANOGA AGAP007038-PA OS=Anopheles gambiae GN=AGAP007038 PE=4 SV=4 Length = 440
Score = 33.9 bits (76), Expect = 4.2 Identities = 17/52 (32%), Positives = 25/52 (48%) Frame = +1
Query: 112 MASPNSKPDTRNISPSLNKNLFIHHHQHKSSLNKNLFIHHHKSKREIHHLKA 267 +A+ +S + + S S N + HHH H SS +HH S HH +A Sbjct: 145 LANRSSSSSSNSSSSSNNSSSNHHHHHHHSSSGSGSSSNHHTSLHHGHHRQA 196
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