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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914153
Clone id YMU001_000042_E06
Library
Length 555
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000042_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTGAACAAACAACACTATCAAATAAAGATGAAACACATAATTTTCATCCTGCTGACAA
AACACATTTCTGGAATTGACATCCCTTTATCTGAGAAGTTCAATAGAGTGATAACCATGG
ATTAAAAACCCCACAAGAGCAAACTCCCAATTCATGCAGGAGTTTAGTTGCACTCTGCCT
ATATGCATGGTGCCTGTGCTGTAGAATCCTAAAAGCTCAACATAAATTACAAATAAAAAC
CAAGTGGGGCGCATATCTTGGGCAGCCCCACCCAAACAAAACACTTCTGTATCAACTTAC
AACAGGGGTATCTGTGTTATGCACATTTGTGCTGATGATGCTCGCATGCTCATTAAATTG
CACTATATGCTTAAGAGCGGACCTGGAAGGTGTATGGTTAGTTTTTAATGGATATCGAGC
TGATGCACTACATGAGATAAAAGCCGTTATGGTACGCTACTTCACGTTAAAGCCGTTGTC
TTTAACGGATATCCAGCTTTACATGATTGAATTTGTGAAATGTGGTAGCTACTTCGCATA
CTCAAAGAGCTAATG
■■Homology search results ■■ -
sp_hit_id Q2HJ69
Definition sp|Q2HJ69|CN109_BOVIN UPF0694 transmembrane protein C14orf109 homolog OS=Bos taurus
Align length 106
Score (bit) 32.7
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914153|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_E06.
         (555 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2HJ69|CN109_BOVIN UPF0694 transmembrane protein C14orf109 ho...    33   1.2  
sp|Q8BH26|CN109_MOUSE UPF0694 transmembrane protein C14orf109 ho...    32   1.6  
sp|Q9VHT4|FUCT1_DROME Probable GDP-fucose transporter OS=Drosoph...    32   2.7  
sp|Q6QA74|CN109_PIG UPF0694 transmembrane protein C14orf109 homo...    31   3.6  
sp|Q88QQ6|ARGC1_PSEPK N-acetyl-gamma-glutamyl-phosphate reductas...    30   6.0  

>sp|Q2HJ69|CN109_BOVIN UPF0694 transmembrane protein C14orf109
           homolog OS=Bos taurus PE=2 SV=1
          Length = 163

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
 Frame = -1

Query: 438 ISCSASARYPLKTNHTPSRSALKHIVQFNEHASIISTNVHNTDTPVVS*----------- 292
           ++ +A+  Y  + N T +R AL+HI Q  E     +T  H+  T ++S            
Sbjct: 50  LASAAAFYYVFEINETYNRLALEHIQQHPEEPLEGTTWTHSLKTRLLSLPFWFWTVVFLI 109

Query: 291 --YRSVLFGWGCPRYAPHLVFICNLC*AFRILQHRHHAYRQSATKL 160
              +  LF + C R  P  V  C +     ++ +RH A+ +++ ++
Sbjct: 110 PYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKASNQI 155


>sp|Q8BH26|CN109_MOUSE UPF0694 transmembrane protein C14orf109
           homolog OS=Mus musculus PE=2 SV=1
          Length = 163

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
 Frame = -1

Query: 438 ISCSASARYPLKTNHTPSRSALKHIVQFNEHASIISTNVHNTDTPVVS*----------- 292
           ++ +A+  Y  + N T +R AL+HI+Q  E     +T  H+    ++S            
Sbjct: 50  LASAAAFYYVFEINETYNRLALEHILQHPEEPREGTTWTHSLKARLLSLPFWLWTIIFLI 109

Query: 291 --YRSVLFGWGCPRYAPHLVFICNLC*AFRILQHRHHAYRQSATKL 160
              +  LF + C R  P  V  C +     ++ +RH A+ +++ ++
Sbjct: 110 PYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKASNQI 155


>sp|Q9VHT4|FUCT1_DROME Probable GDP-fucose transporter OS=Drosophila
           melanogaster GN=Gfr PE=2 SV=1
          Length = 337

 Score = 31.6 bits (70), Expect = 2.7
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = +2

Query: 296 LTTGVSVLCTFVLMMLACSLNCTICLRADLEGVWLVFNGYRADALHEI 439
           LTT  SV+ T+V++    S  C +C  A + G WL   G   ++L E+
Sbjct: 127 LTTVFSVVLTYVILRQRTSFKCLLCCGAIVVGFWL---GVDQESLTEV 171


>sp|Q6QA74|CN109_PIG UPF0694 transmembrane protein C14orf109 homolog
           OS=Sus scrofa PE=2 SV=1
          Length = 163

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
 Frame = -1

Query: 438 ISCSASARYPLKTNHTPSRSALKHIVQFNEHASIISTNVHNTDTPVVS*----------- 292
           ++ +A+  Y  + N T +R AL+HI Q  E     +T  H+  + ++S            
Sbjct: 50  LASAAAFYYVFEINETYNRLALEHIQQHPEEPLEGTTWTHSLKSRLLSLPFWFWTIIFLI 109

Query: 291 --YRSVLFGWGCPRYAPHLVFICNLC*AFRILQHRHHAYRQSATKL 160
              +  LF + C R  P  V  C +     ++ +RH A+ +++ ++
Sbjct: 110 PYLQMFLFLYSCTRADPKTVGYCIIPICLAVICNRHQAFVKASNQI 155


>sp|Q88QQ6|ARGC1_PSEPK N-acetyl-gamma-glutamyl-phosphate reductase 1
           OS=Pseudomonas putida (strain KT2440) GN=argC1 PE=3 SV=1
          Length = 344

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +2

Query: 209 LKAQHKLQIKTKWGAYLGQPHPNKTLLYQLTTGV 310
           L A  +LQ  T+WG + GQPH    LL     G+
Sbjct: 98  LSADFRLQDATEWGKWYGQPHGAPELLKDAVYGL 131
tr_hit_id Q4N8E0
Definition tr|Q4N8E0|Q4N8E0_THEPA Putative uncharacterized protein OS=Theileria parva
Align length 46
Score (bit) 34.3
E-value 4.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914153|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_E06.
         (555 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4N8E0|Q4N8E0_THEPA Putative uncharacterized protein OS=Theil...    34   4.6  
tr|A4RN38|A4RN38_MAGGR Putative uncharacterized protein OS=Magna...    34   4.6  
tr|Q5BZL7|Q5BZL7_SCHJA SJCHGC07721 protein (Fragment) OS=Schisto...    33   7.9  

>tr|Q4N8E0|Q4N8E0_THEPA Putative uncharacterized protein
           OS=Theileria parva GN=TP01_0531 PE=4 SV=1
          Length = 187

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -2

Query: 230 VIYVELLGFYSTGTMHIGRVQLNSCMNWEFALVGFLIHGYHSIELL 93
           V++  L   ++TG +    V L+ C  W  ALVGF   GYH    L
Sbjct: 84  VLHRGLTPNFATGEVMTELVGLSDCKTWHVALVGFWARGYHYFRYL 129


>tr|A4RN38|A4RN38_MAGGR Putative uncharacterized protein
           OS=Magnaporthe grisea GN=MGG_04378 PE=4 SV=1
          Length = 522

 Score = 34.3 bits (77), Expect = 4.6
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
 Frame = +2

Query: 179 LYAWCLCCRILKAQHKLQIKTKWGA------YLGQPHPNKTLLYQLTTGVSVLCTFVLMM 340
           ++A+ +    L A H +Q    WG         G+P   +TLL     G++ +  FVL +
Sbjct: 166 IWAFLMATWTLAADHTVQ----WGKREEEERLTGRPETRRTLLEWTEVGIASIVIFVLCI 221

Query: 341 LACSLNCTICLRA 379
            A  + CT+ +RA
Sbjct: 222 TAGLMTCTLTIRA 234


>tr|Q5BZL7|Q5BZL7_SCHJA SJCHGC07721 protein (Fragment)
           OS=Schistosoma japonicum PE=2 SV=2
          Length = 181

 Score = 33.5 bits (75), Expect = 7.9
 Identities = 15/41 (36%), Positives = 20/41 (48%)
 Frame = -1

Query: 348 HASIISTNVHNTDTPVVS*YRSVLFGWGCPRYAPHLVFICN 226
           H S +   VH  D  +     S+++ W CPR    LVF CN
Sbjct: 32  HQSGLQQTVHRLDAGM-----SIMYAWDCPRSKRELVFFCN 67