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NBDC - LSDB Archive
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BP914164
Clone id YMU001_000042_F10
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000042_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TGCAAGAGAAGCATGCAAGTCTAGATGAGGTTCACTCATGTTTATGCTACATGTGTCGAG
AGAGATTGGTAGTTTAGAGGTTTGTAATGCTGTTCATTTTGGTGTGGTTTCTGCTAGGCG
TGTTTCTGTTCCTTCCATCTCAGCTACTCTTGTTCACACATATGGGAGTTGTGGGAGCTC
TGTCGATGCAGAGATGGTTCTAGAGGAAGTTCTTTTGCTTGATGAGCCACTCATAAATGC
TTATGTCACTAGCGTTGCAGGTGAAGGGAATTCTTTGGCAGCTTTCAGCATTGTGGAGAA
TTCTACAGCTGCAGGTTTAAAGAGAGATAAAATATCACTTACTTCAATTCTGTCAGCCTG
TTGTCGTACTGGTCTGACAGCAGAAGGTCTAGAATATTACCAGAGCTGTTGCAAACAGGA
CATGACACCCGATTTACAGCATTATTGCATATTGGCCAGCATGCTGGCCCGTGCAGGTGA
CTTCACGAGAGTTGAGAACCTTCTTG
■■Homology search results ■■ -
sp_hit_id Q9FM64
Definition sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana
Align length 160
Score (bit) 71.2
E-value 3.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914164|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_F10.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protei...    71   3e-12
sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protei...    66   1e-10
sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protei...    65   2e-10
sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containi...    64   5e-10
sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containi...    63   9e-10
sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protei...    62   2e-09
sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protei...    62   2e-09
sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protei...    62   2e-09
sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protei...    61   3e-09
sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protei...    61   3e-09
sp|Q9SS97|PP205_ARATH Putative pentatricopeptide repeat-containi...    60   4e-09
sp|Q9ZQ74|PP146_ARATH Pentatricopeptide repeat-containing protei...    60   4e-09
sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containi...    60   4e-09
sp|Q9LR69|PPR8_ARATH Pentatricopeptide repeat-containing protein...    60   6e-09
sp|Q680Z7|PPR24_ARATH Pentatricopeptide repeat-containing protei...    59   1e-08
sp|O22137|PP202_ARATH Pentatricopeptide repeat-containing protei...    59   1e-08
sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protei...    59   2e-08
sp|Q9MA50|PPR13_ARATH Pentatricopeptide repeat-containing protei...    58   2e-08
sp|Q3E9N1|PP359_ARATH Pentatricopeptide repeat-containing protei...    58   3e-08
sp|Q9STS9|PP268_ARATH Putative pentatricopeptide repeat-containi...    58   3e-08
sp|Q9LVF9|PP245_ARATH Pentatricopeptide repeat-containing protei...    58   3e-08
sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protei...    57   6e-08
sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protei...    56   1e-07
sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protei...    56   1e-07
sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protei...    56   1e-07
sp|O49619|PP350_ARATH Pentatricopeptide repeat-containing protei...    55   1e-07
sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protei...    55   2e-07
sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protei...    55   2e-07
sp|P0C8Q8|PP394_ARATH Pentatricopeptide repeat-containing protei...    55   2e-07
sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protei...    55   2e-07

>sp|Q9FM64|PP431_ARATH Pentatricopeptide repeat-containing protein
            At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21
            PE=2 SV=1
          Length = 830

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
 Frame = +2

Query: 32   SLMFMLHVSREIGSLEVCNAVHFGVV-SARRVSVPSISATLVHTYGSCGSSXXXXXXXXX 208
            S+   L     + SL +   +H  ++ + +  S+ SI  +LV  Y  CG           
Sbjct: 548  SITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGS 607

Query: 209  XXXXXXPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEG 388
                  PL NA +++ A  GN   A ++  +    GLK D I++T++LSAC   G   + 
Sbjct: 608  KLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQA 667

Query: 389  LEYYQS-CCKQDMTPDLQHYCILASMLARAGDFTRVENLL 505
            +E +     K+ M P L+HY ++  +LA AG+  +   L+
Sbjct: 668  IEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLI 707


>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein
            At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1
          Length = 990

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 1/146 (0%)
 Frame = +2

Query: 71   SLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXXXPLINAYVT 250
            +LE    +H   +     + P +  +LV  Y  CGS                   NA + 
Sbjct: 633  ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692

Query: 251  SVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQSC-CKQDMT 427
             +A  G       + +   + G+K DK++   +LSAC  +GL +E  ++ +S      + 
Sbjct: 693  GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752

Query: 428  PDLQHYCILASMLARAGDFTRVENLL 505
            P+++HY  LA  L RAG   + ENL+
Sbjct: 753  PEIEHYSCLADALGRAGLVKQAENLI 778


>sp|Q9SVA5|PP357_ARATH Pentatricopeptide repeat-containing protein
            At4g39530 OS=Arabidopsis thaliana GN=PCMP-E52 PE=1 SV=1
          Length = 834

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 35/154 (22%), Positives = 68/154 (44%)
 Frame = +2

Query: 44   MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
            M+  +  + S+++    H  ++       P I+  L+  Y  CGS               
Sbjct: 561  MVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRD 620

Query: 224  XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
                N+ ++S A  G    A  ++E   + G++ + I+   +LSAC   GL  +GL+ ++
Sbjct: 621  VVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFE 680

Query: 404  SCCKQDMTPDLQHYCILASMLARAGDFTRVENLL 505
               +  + P+ +HY  + S+L RAG   +   L+
Sbjct: 681  LMLRFGIEPETEHYVCMVSLLGRAGRLNKARELI 714


>sp|Q9FNN9|PP370_ARATH Putative pentatricopeptide repeat-containing
            protein At5g08490 OS=Arabidopsis thaliana GN=PCMP-E32
            PE=3 SV=1
          Length = 849

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 39/150 (26%), Positives = 64/150 (42%), Gaps = 1/150 (0%)
 Frame = +2

Query: 32   SLMFMLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXX 211
            ++M +L V  ++ SL +    H G +    +    +  TL+  Y  CGS           
Sbjct: 570  TIMNLLPVCAQLASLHLVRQCH-GYIIRGGLGDIRLKGTLLDVYAKCGSLKHAYSVFQSD 628

Query: 212  XXXXXPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGL 391
                  +  A V   A  G    A  I  + T + +K D + +T++L+ACC  GL  +GL
Sbjct: 629  ARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGL 688

Query: 392  EYYQSC-CKQDMTPDLQHYCILASMLARAG 478
            + Y S      M P ++ Y     ++AR G
Sbjct: 689  QIYDSIRTVHGMKPTMEQYACAVDLIARGG 718


>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing
           protein At2g01510 OS=Arabidopsis thaliana GN=PCMP-H36
           PE=3 SV=1
          Length = 825

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 39/155 (25%), Positives = 65/155 (41%), Gaps = 1/155 (0%)
 Frame = +2

Query: 44  MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
           +L  S    SL +   +H  ++ +  +      + LV  Y  CGS               
Sbjct: 458 VLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN 517

Query: 224 XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
               NA +++ A  G+  AA         +GL+ D +S+  +L+AC   G   +G EY+Q
Sbjct: 518 AVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQ 577

Query: 404 SCCK-QDMTPDLQHYCILASMLARAGDFTRVENLL 505
           +      +TP  +HY  +  +L R G F   E L+
Sbjct: 578 AMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLM 612


>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-H69 PE=2 SV=1
          Length = 704

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 42/159 (26%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
 Frame = +2

Query: 32  SLMFMLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXX 211
           SL+ +L V   + SL+    VH  +V  +      +++ L+  Y  CG            
Sbjct: 333 SLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF 392

Query: 212 XXXXXPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGL 391
                 + N+ ++  A  G    A  I     ++G   +K++L +IL+AC   G   EGL
Sbjct: 393 SSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGL 452

Query: 392 EYYQSC-CKQDMTPDLQHYCILASMLARAGDFTRVENLL 505
           E ++S   K  +TP ++HY     ML RAG   +   L+
Sbjct: 453 EIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELI 491


>sp|Q9LRV9|PP228_ARATH Pentatricopeptide repeat-containing protein
           At3g13880 OS=Arabidopsis thaliana GN=PCMP-E89 PE=2 SV=1
          Length = 748

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
 Frame = +2

Query: 134 SISATLVHTYGSCGSSXXXXXXXXXXXXXXXPLINAYVTSVAGEGNSLAAFSIVENSTAA 313
           S+  + +  Y   G+                   +A ++S+A  G++  A +I E+    
Sbjct: 495 SVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTH 554

Query: 314 GLKRDKISLTSILSACCRTGLTAEGLEYYQSCCKQD--MTPDLQHYCILASMLARAGDFT 487
           G+K ++ +   +L ACC  GL  +GL+Y+Q C K D  + P+ +H+  L  +L R G  +
Sbjct: 555 GIKPNQQAFLGVLIACCHGGLVTQGLKYFQ-CMKNDYRINPNEKHFTCLVDLLGRTGRLS 613

Query: 488 RVENLL 505
             ENL+
Sbjct: 614 DAENLI 619


>sp|Q9SJZ3|PP169_ARATH Pentatricopeptide repeat-containing protein
           At2g22410, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-E28 PE=2 SV=1
          Length = 681

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 1/159 (0%)
 Frame = +2

Query: 32  SLMFMLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXX 211
           +++  L    ++G+L+V   +H  +         ++  +LV  Y  CG+           
Sbjct: 391 TMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGI 450

Query: 212 XXXXXPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGL 391
                    A +  +A  G++  A S       AG+  D+I+   +LSACC  G+   G 
Sbjct: 451 QTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGR 510

Query: 392 EYY-QSCCKQDMTPDLQHYCILASMLARAGDFTRVENLL 505
           +Y+ Q   + ++ P L+HY I+  +L RAG     + L+
Sbjct: 511 DYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLM 549



 Score = 34.7 bits (78), Expect = 0.26
 Identities = 23/126 (18%), Positives = 46/126 (36%)
 Frame = +2

Query: 104 VVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXXXPLINAYVTSVAGEGNSLAA 283
           V+  R   V  +    +H + SCG                    N  +      G +  A
Sbjct: 182 VLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKA 241

Query: 284 FSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQSCCKQDMTPDLQHYCILASM 463
             + +   + G+K D +++  ++S+C   G    G E+Y+   +  +   +     L  M
Sbjct: 242 IYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDM 301

Query: 464 LARAGD 481
            ++ GD
Sbjct: 302 FSKCGD 307


>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein
           At1g20230 OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
          Length = 760

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 1/155 (0%)
 Frame = +2

Query: 44  MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
           ML     I +L    + H   V    +    + + L+  Y  CG                
Sbjct: 394 MLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKN 453

Query: 224 XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
               N+ +   +  G +    SI E+     LK D IS TS+LSAC + GLT EG +Y++
Sbjct: 454 LVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFK 513

Query: 404 SCCKQ-DMTPDLQHYCILASMLARAGDFTRVENLL 505
              ++  + P L+HY  + ++L RAG      +L+
Sbjct: 514 MMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548



 Score = 37.0 bits (84), Expect = 0.053
 Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 3/142 (2%)
 Frame = +2

Query: 65  IGSLEVCNA---VHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXXXPLI 235
           +G  E+ N    +H  V+    +    + + ++  YG  G                  + 
Sbjct: 262 VGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVC 321

Query: 236 NAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQSCCK 415
           NAY+T ++  G    A  + E      ++ + +S TSI++ C + G   E LE ++    
Sbjct: 322 NAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381

Query: 416 QDMTPDLQHYCILASMLARAGD 481
             + P   ++  + SML   G+
Sbjct: 382 AGVKP---NHVTIPSMLPACGN 400


>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-H87 PE=2 SV=1
          Length = 633

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 40/141 (28%), Positives = 59/141 (41%)
 Frame = +2

Query: 68  GSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXXXPLINAYV 247
           G LE    VH  ++ +    V     TL+  Y   GS                   N+ +
Sbjct: 276 GFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLL 335

Query: 248 TSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQSCCKQDMT 427
           T+ A  G    A    E     G++ ++IS  S+L+AC  +GL  EG  YY+   K  + 
Sbjct: 336 TAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV 395

Query: 428 PDLQHYCILASMLARAGDFTR 490
           P+  HY  +  +L RAGD  R
Sbjct: 396 PEAWHYVTVVDLLGRAGDLNR 416
tr_hit_id A7P4V7
Definition tr|A7P4V7|A7P4V7_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera
Align length 155
Score (bit) 76.3
E-value 8.0e-13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914164|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_F10.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7P4V7|A7P4V7_VITVI Chromosome chr4 scaffold_6, whole genome ...    76   8e-13
tr|A7PEW9|A7PEW9_VITVI Chromosome chr11 scaffold_13, whole genom...    73   7e-12
tr|A7P4V6|A7P4V6_VITVI Chromosome chr4 scaffold_6, whole genome ...    73   7e-12
tr|A5AZR2|A5AZR2_VITVI Putative uncharacterized protein OS=Vitis...    73   7e-12
tr|A5C7D6|A5C7D6_VITVI Putative uncharacterized protein OS=Vitis...    73   9e-12
tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea...    69   1e-10
tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella paten...    68   2e-10
tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subs...    67   4e-10
tr|A7Q618|A7Q618_VITVI Chromosome chr14 scaffold_54, whole genom...    67   4e-10
tr|A7PA26|A7PA26_VITVI Chromosome chr14 scaffold_9, whole genome...    67   4e-10
tr|A5AUW9|A5AUW9_VITVI Putative uncharacterized protein OS=Vitis...    67   4e-10
tr|A3ANL0|A3ANL0_ORYSJ Putative uncharacterized protein OS=Oryza...    67   4e-10
tr|A2XMV7|A2XMV7_ORYSI Putative uncharacterized protein OS=Oryza...    67   4e-10
tr|Q60D18|Q60D18_SOLDE Pentatricopeptide repeat domain containin...    67   5e-10
tr|B8BLU7|B8BLU7_ORYSI Putative uncharacterized protein OS=Oryza...    66   8e-10
tr|Q6PRD0|Q6PRD0_ORYSJ Pentatricopeptide repeat protein OS=Oryza...    66   1e-09
tr|Q0J1T8|Q0J1T8_ORYSJ Os09g0413300 protein OS=Oryza sativa subs...    66   1e-09
tr|B4F908|B4F908_MAIZE Putative uncharacterized protein OS=Zea m...    66   1e-09
tr|A7PRL5|A7PRL5_VITVI Chromosome chr14 scaffold_27, whole genom...    66   1e-09
tr|A3BYS8|A3BYS8_ORYSJ Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|A2Z176|A2Z176_ORYSI Putative uncharacterized protein OS=Oryza...    66   1e-09
tr|Q6JJ28|Q6JJ28_IPOTF Putative pentatricopeptide repeat-contain...    65   1e-09
tr|Q2QY91|Q2QY91_ORYSJ Pentatricopeptide, putative, expressed OS...    65   1e-09
tr|Q0IQD7|Q0IQD7_ORYSJ Os12g0128200 protein OS=Oryza sativa subs...    65   1e-09
tr|A7QGA5|A7QGA5_VITVI Chromosome undetermined scaffold_91, whol...    65   1e-09
tr|A3CEL5|A3CEL5_ORYSJ Putative uncharacterized protein OS=Oryza...    65   1e-09
tr|A7QUP3|A7QUP3_VITVI Chromosome chr10 scaffold_179, whole geno...    65   2e-09
tr|A5C5V0|A5C5V0_VITVI Putative uncharacterized protein OS=Vitis...    65   2e-09
tr|Q5W963|Q5W963_PHYPA PPR1106-17 OS=Physcomitrella patens PE=2 ...    64   3e-09
tr|Q2HS71|Q2HS71_MEDTR SAM (And some other nucleotide) binding m...    64   3e-09

>tr|A7P4V7|A7P4V7_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032300001
           PE=4 SV=1
          Length = 753

 Score = 76.3 bits (186), Expect = 8e-13
 Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
 Frame = +2

Query: 44  MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
           ++  S  + +LE    +H  V+    VS P +  +LV  Y  CG+               
Sbjct: 422 LIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDSYRLFKKMNVRN 481

Query: 224 XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
             L NA +  +A  GN+  A ++ ++  + G++ D++S   ILSAC   GLT+E  EY+ 
Sbjct: 482 IVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSLAGLTSEAYEYFH 541

Query: 404 SCCKQ-DMTPDLQHYCILASMLARAGDFTRVENLL 505
           S      + P+++HY  L   L RAG    V+ ++
Sbjct: 542 SMPNDCGIEPEIEHYSCLVDALGRAGLVQEVDKVI 576


>tr|A7PEW9|A7PEW9_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016818001
           PE=4 SV=1
          Length = 789

 Score = 73.2 bits (178), Expect = 7e-12
 Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 3/161 (1%)
 Frame = +2

Query: 32  SLMFMLHVSREIGSLEVCNAVHFGVVSARR--VSVPSISATLVHTYGSCGSSXXXXXXXX 205
           S+  +L    +I SL    A+H G ++     +SVP ++ +LV  Y  CGS         
Sbjct: 488 SITSVLLACTDIPSLWYGRAIH-GFITRHEFCLSVP-VATSLVDMYAKCGSIDEAKKVFH 545

Query: 206 XXXXXXXPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAE 385
                  P+ NA +++ A  G ++ A ++ ++    G++ D I+ TSILSAC   GL  E
Sbjct: 546 MMSSKELPIYNAMISAYALHGQAVEALALFKHLQKEGIEPDSITFTSILSACSHAGLVNE 605

Query: 386 GLEYY-QSCCKQDMTPDLQHYCILASMLARAGDFTRVENLL 505
           GL  +     K +M P ++HY  + S+L+R G+      L+
Sbjct: 606 GLNLFADMVSKHNMNPIMEHYGCVVSLLSRCGNLDEALRLI 646


>tr|A7P4V6|A7P4V6_VITVI Chromosome chr4 scaffold_6, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00032298001
            PE=4 SV=1
          Length = 1002

 Score = 73.2 bits (178), Expect = 7e-12
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
 Frame = +2

Query: 44   MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
            ++  S  + +LE    +H  V+    VS P +  +LV  Y  CG+               
Sbjct: 636  LIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN 695

Query: 224  XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
              L NA +  +A  GN+  A ++ ++  + G++ D++S   ILSAC   GLT+E  EY  
Sbjct: 696  IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH 755

Query: 404  SCCKQ-DMTPDLQHYCILASMLARAG 478
            S      + P+++HY  L   L RAG
Sbjct: 756  SMPNDYGIEPEIEHYSCLVDALGRAG 781


>tr|A5AZR2|A5AZR2_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_016538 PE=4 SV=1
          Length = 503

 Score = 73.2 bits (178), Expect = 7e-12
 Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
 Frame = +2

Query: 44  MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
           ++  S  + +LE    +H  V+    VS P +  +LV  Y  CG+               
Sbjct: 137 LIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRN 196

Query: 224 XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
             L NA +  +A  GN+  A ++ ++  + G++ D++S   ILSAC   GLT+E  EY  
Sbjct: 197 IALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLH 256

Query: 404 SCCKQ-DMTPDLQHYCILASMLARAG 478
           S      + P+++HY  L   L RAG
Sbjct: 257 SMPNDYGIEPEIEHYSCLVDALGRAG 282


>tr|A5C7D6|A5C7D6_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_035236 PE=4 SV=1
          Length = 2076

 Score = 72.8 bits (177), Expect = 9e-12
 Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
 Frame = +2

Query: 44   MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
            ++  S  + +LE    +H  V+    VS P +  +LV  Y  CG+               
Sbjct: 573  LIKASSYVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDXYRLFKKMNVRN 632

Query: 224  XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
              L NA +  +A  GN+  A ++ ++  + G++ D++S   ILSAC   GLT+E  EY+ 
Sbjct: 633  IVLWNAMLVGIAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSLAGLTSEAYEYFH 692

Query: 404  SCCKQ-DMTPDLQHYCILASMLARAG 478
            S      + P+++HY  L   L  AG
Sbjct: 693  SMPNDCGIEPEIEHYSCLVDALGXAG 718


>tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 644

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
 Frame = +2

Query: 74  LEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXXXPLINAYVTS 253
           LE  N  H  V+ +   S   +  TLV  Y  CGS                  ++A +  
Sbjct: 404 LEQGNEAHEVVIRSGFQSDVLVGNTLVGMYAKCGSIEDARKVFDRMRQQDSASLSAMIVG 463

Query: 254 VAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQSCCK-QDMTP 430
            A  G S  +  + E     GLK D+++   +LSACC  GL  EG +Y+    +   +TP
Sbjct: 464 YAINGCSKESLELFEQMQFTGLKPDRVTFVGVLSACCHAGLVDEGRQYFDIMTRFYHITP 523

Query: 431 DLQHYCILASMLARAGDFTRVENLL 505
            ++HY  +  +L RAG F    +L+
Sbjct: 524 AMEHYGCMIDLLGRAGCFDEANDLI 548


>tr|A9T8E9|A9T8E9_PHYPA Predicted protein OS=Physcomitrella patens
            subsp. patens GN=PHYPADRAFT_192620 PE=4 SV=1
          Length = 902

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 46/155 (29%), Positives = 63/155 (40%), Gaps = 1/155 (0%)
 Frame = +2

Query: 44   MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
            ML+     GSLE    +H  V      S  S+   LV TY  CGS               
Sbjct: 536  MLNACANSGSLEWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMTKRN 595

Query: 224  XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
                NA +   A  G    A  + E     G+K D ++  S+LSAC   GL  EG  Y+ 
Sbjct: 596  VISWNAIIGGSAQHGRGQDALQLFERMKMEGVKPDIVTFVSLLSACSHAGLLEEGRRYFC 655

Query: 404  SCCKQ-DMTPDLQHYCILASMLARAGDFTRVENLL 505
            S  +   + P ++HY  +  +L RAG     E L+
Sbjct: 656  SMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEALI 690



 Score = 44.3 bits (103), Expect = 0.003
 Identities = 35/148 (23%), Positives = 54/148 (36%)
 Frame = +2

Query: 44  MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
           +L+      +LE    +H  VV A   +   +  TLV+ Y  CGS               
Sbjct: 435 ILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRD 494

Query: 224 XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
               NA +   A       A  + +     GLK DK++  ++L+AC  +G      E + 
Sbjct: 495 IVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHT 554

Query: 404 SCCKQDMTPDLQHYCILASMLARAGDFT 487
              K     D      L S  A+ G F+
Sbjct: 555 LVRKGGFFSDTSVGNALVSTYAKCGSFS 582



 Score = 37.0 bits (84), Expect = 0.54
 Identities = 27/129 (20%), Positives = 47/129 (36%)
 Frame = +2

Query: 92  VHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXXXPLINAYVTSVAGEGN 271
           +H  V  A   S   +   L+  Y  CGS                    A +  +A  G 
Sbjct: 350 IHSRVAKAGFTSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGF 409

Query: 272 SLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQSCCKQDMTPDLQHYCI 451
              A ++ +    AG++ ++++ TSIL+AC        G   +Q   +  +  D      
Sbjct: 410 GAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNT 469

Query: 452 LASMLARAG 478
           L +M +  G
Sbjct: 470 LVNMYSMCG 478


>tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBb0021G19.15 PE=4 SV=1
          Length = 611

 Score = 67.4 bits (163), Expect = 4e-10
 Identities = 37/153 (24%), Positives = 69/153 (45%)
 Frame = +2

Query: 32  SLMFMLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXX 211
           +L+ +L     +G+LE+   +H  +   R  S+  ++  L+  Y  CGS           
Sbjct: 241 TLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKCGSLEDAIGVFQDM 300

Query: 212 XXXXXPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGL 391
                   +  + + A  G    A S+ E     G+K D ++   +L AC  +G+ +EGL
Sbjct: 301 ESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACSHSGMVSEGL 360

Query: 392 EYYQSCCKQDMTPDLQHYCILASMLARAGDFTR 490
           +Y+ S  +  +   ++HY  +  +LAR+G   R
Sbjct: 361 QYFDSMREYGIVSGIKHYGCVTDLLARSGQLER 393



 Score = 34.7 bits (78), Expect = 2.7
 Identities = 29/128 (22%), Positives = 44/128 (34%)
 Frame = +2

Query: 95  HFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXXXPLINAYVTSVAGEGNS 274
           H   V A       ++ TL++ Y  CG                    NA +T+       
Sbjct: 161 HGVAVKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLP 220

Query: 275 LAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQSCCKQDMTPDLQHYCIL 454
             A  +     A GLK   ++L S+LSAC   G    G   +    K  +   ++    L
Sbjct: 221 GEALVLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTAL 280

Query: 455 ASMLARAG 478
             M A+ G
Sbjct: 281 IDMYAKCG 288


>tr|A7Q618|A7Q618_VITVI Chromosome chr14 scaffold_54, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00031188001
           PE=4 SV=1
          Length = 471

 Score = 67.4 bits (163), Expect = 4e-10
 Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
 Frame = +2

Query: 32  SLMFMLHVSREIGSLEVCNAVHFGVVSARRVSVPS----ISATLVHTYGSCGSSXXXXXX 199
           +++ +L  + ++G LE    VH G +  + V  P+    +   LV  Y  CG        
Sbjct: 216 TMVCVLSAASQLGVLETGVGVH-GYIE-KTVLAPANDVFVGTGLVDMYSKCGCLGSALCI 273

Query: 200 XXXXXXXXXPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLT 379
                        A +T +A  G    A  +++   A G+K + ++ TS+ SACC  GL 
Sbjct: 274 FWGMKERNVLTWTAMITGLARHGRGKEALELLDEMVAYGVKPNAVTFTSLFSACCHAGLV 333

Query: 380 AEGLEYYQSC-CKQDMTPDLQHYCILASMLARAG 478
            EGL+ + S   K  +TP +QHY  +  +L RAG
Sbjct: 334 EEGLQLFHSMRSKFGVTPGIQHYGCIVDLLGRAG 367


>tr|A7PA26|A7PA26_VITVI Chromosome chr14 scaffold_9, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037946001
           PE=4 SV=1
          Length = 820

 Score = 67.4 bits (163), Expect = 4e-10
 Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
 Frame = +2

Query: 44  MLHVSREIGSLEVCNAVHFGVVSARRVSVPSISATLVHTYGSCGSSXXXXXXXXXXXXXX 223
           +L  S  I SL +   +H  ++ +  +S     + L+  Y  CGS               
Sbjct: 453 LLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRN 512

Query: 224 XPLINAYVTSVAGEGNSLAAFSIVENSTAAGLKRDKISLTSILSACCRTGLTAEGLEYYQ 403
               NA +++ A  G + A     +    +GL+ D +S   +LSAC  +GL  EGL ++ 
Sbjct: 513 IVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFN 572

Query: 404 SCCK-QDMTPDLQHYCILASMLARAGDFTRVENLL 505
           S  +   + P  +HY  +  ML R+G F   E L+
Sbjct: 573 SMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLM 607