BP914166 |
Clone id |
YMU001_000042_G02 |
Library |
YMU01 |
Length |
526 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000042_G02. |
Accession |
BP914166 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL866Contig1 |
Sequence |
CCAATGACAGAGTGGGACTTCTGTCGGACGTAACCCGGATTTTTAGGGAGCATGGGCTGT CTGTCACAAGAGCTGATGTCAACACCAAAGACAACAAGGCTATCAATGTGTTTTACGTCA CTGATGCTGCAGGGAATGTTGTGGACCTGAAAGCAGTTGAAGCAGTGAGACAGTCAATAG GAAAAGCAGTTTTGCAAGTGAAAAGTCCACCTTCTGATTGCAATATTCCTTCCACAAAGG CAACCACATCATCAAAGTTGTCGATTGGCAGTTTGTTGTTGGGAACGCCTGCACAAGTTC TGTATAGTTTGGGGTTAATCAAATCGTGTTCATGAAGATATATATCGTGCAGTGGTCATC TTCACGTTCATACATATGTACTATATGATTTGTTGTTCATAGTTTGCATATTTACCTGAC TTCAGAAGAGGCTATCCCTCATCTGAAAAAGCCAACATTATAGGAATGAGGGTATTGGCA TTTTGGGCCATAGCCCACCTAGGCATGCAATTCGCGGCCGCGAATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A6U5G1 |
Definition |
sp|A6U5G1|GLND_SINMW [Protein-PII] uridylyltransferase OS=Sinorhizobium medicae (strain WSM419) |
Align length |
46 |
Score (bit) |
42.4 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9T9E5 |
Definition |
tr|A9T9E5|A9T9E5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
70 |
Score (bit) |
105.0 |
E-value |
2.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914166|Adiantum capillus-veneris mRNA, clone: YMU001_000042_G02. (508 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9T9E5|A9T9E5_PHYPA Predicted protein OS=Physcomitrella paten... 105 2e-21 tr|A9SEL6|A9SEL6_PHYPA Predicted protein OS=Physcomitrella paten... 102 8e-21 tr|Q75IY1|Q75IY1_ORYSJ Os03g0413100 protein OS=Oryza sativa subs... 101 2e-20 tr|Q75IY0|Q75IY0_ORYSJ Putative ACT domain containing protein, A... 101 2e-20 tr|A3AJ25|A3AJ25_ORYSJ Putative uncharacterized protein OS=Oryza... 101 2e-20 tr|A2XHY2|A2XHY2_ORYSI Putative uncharacterized protein OS=Oryza... 101 2e-20 tr|A9SSE7|A9SSE7_PHYPA Predicted protein OS=Physcomitrella paten... 99 1e-19 tr|B7ZYV0|B7ZYV0_MAIZE Putative uncharacterized protein OS=Zea m... 98 3e-19 tr|B6SL14|B6SL14_MAIZE ACR4 OS=Zea mays PE=2 SV=1 98 3e-19 tr|B4G0N4|B4G0N4_MAIZE Putative uncharacterized protein OS=Zea m... 98 3e-19 tr|A9RYC9|A9RYC9_PHYPA Predicted protein OS=Physcomitrella paten... 97 4e-19 tr|B4YPV1|B4YPV1_BRAOA Putative uncharacterized protein OS=Brass... 94 4e-18 tr|A7QUU8|A7QUU8_VITVI Chromosome chr1 scaffold_180, whole genom... 94 5e-18 tr|Q9ZPQ8|Q9ZPQ8_ARATH Putative uridylyl transferase OS=Arabidop... 93 8e-18 tr|Q8LJW2|Q8LJW2_ARATH ACR5 OS=Arabidopsis thaliana GN=ACR5 PE=2... 93 8e-18 tr|A9PH33|A9PH33_POPTR Putative uncharacterized protein OS=Popul... 91 2e-17 tr|A5C2B4|A5C2B4_VITVI Putative uncharacterized protein OS=Vitis... 91 2e-17 tr|Q9LQB5|Q9LQB5_ARATH F4N2.2 OS=Arabidopsis thaliana PE=4 SV=1 91 3e-17 tr|Q8LJW3|Q8LJW3_ARATH ACR4 (At1g69040) OS=Arabidopsis thaliana ... 91 3e-17 tr|Q8GWT8|Q8GWT8_ARATH Putative uncharacterized protein At1g6904... 91 3e-17 tr|Q3ECF7|Q3ECF7_ARATH Uncharacterized protein At1g69040.2 OS=Ar... 91 3e-17 tr|B4YPV8|B4YPV8_BRAOA Putative uncharacterized protein OS=Brass... 91 3e-17 tr|A7P2B7|A7P2B7_VITVI Chromosome chr1 scaffold_5, whole genome ... 91 3e-17 tr|A5BD32|A5BD32_VITVI Putative uncharacterized protein OS=Vitis... 91 3e-17 tr|A9NND6|A9NND6_PICSI Putative uncharacterized protein OS=Picea... 90 7e-17 tr|A2X614|A2X614_ORYSI Putative uncharacterized protein OS=Oryza... 89 1e-16 tr|Q6ZI91|Q6ZI91_ORYSJ Os02g0555600 protein OS=Oryza sativa subs... 89 2e-16 tr|A5AWQ7|A5AWQ7_VITVI Putative uncharacterized protein (Chromos... 89 2e-16 tr|A3A7Z8|A3A7Z8_ORYSJ Putative uncharacterized protein OS=Oryza... 89 2e-16 tr|Q6YZC9|Q6YZC9_ORYSJ Uridylyl transferase-like OS=Oryza sativa... 88 2e-16
>tr|A9T9E5|A9T9E5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_142202 PE=4 SV=1 Length = 454
Score = 105 bits (261), Expect = 2e-21 Identities = 51/70 (72%), Positives = 61/70 (87%) Frame = +3
Query: 3 NDRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAGNVVDLKAVEAVRQSIG 182 NDRVGLLSDVT+IFRE+GLSV RADV T+D+KA+NVFYV DA+G VD+K VEA+R+SIG Sbjct: 347 NDRVGLLSDVTKIFRENGLSVARADVTTRDDKAVNVFYVVDASGCTVDMKVVEAMRKSIG 406
Query: 183 KAVLQVKSPP 212 A+LQVK P Sbjct: 407 HAILQVKGVP 416
>tr|A9SEL6|A9SEL6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_211504 PE=4 SV=1 Length = 448
Score = 102 bits (255), Expect = 8e-21 Identities = 50/81 (61%), Positives = 68/81 (83%), Gaps = 1/81 (1%) Frame = +3
Query: 3 NDRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAGNVVDLKAVEAVRQSIG 182 NDRVGLLS+VT+IFRE+GLSV RADV+T+D+KA+NVFYV DA+G V++K VE +R++IG Sbjct: 344 NDRVGLLSEVTKIFRENGLSVARADVSTRDDKAVNVFYVLDASGRPVNMKVVEEMRKTIG 403
Query: 183 KAVLQVK-SPPSDCNIPSTKA 242 A+LQVK +PP + +P+ A Sbjct: 404 HAILQVKGTPPQESELPNPGA 424
Score = 33.5 bits (75), Expect = 6.0 Identities = 17/60 (28%), Positives = 35/60 (58%), Gaps = 1/60 (1%) Frame = +3
Query: 6 DRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAGNVV-DLKAVEAVRQSIG 182 DR G+L +V ++ + L + ++D+ + +VF+V D +GN V D ++ ++ S+G Sbjct: 44 DRHGILLNVVQVLTDLDLVIVKSDMFSDKGWFFDVFHVVDHSGNKVRDRSVLDHIQNSLG 103
>tr|Q75IY1|Q75IY1_ORYSJ Os03g0413100 protein OS=Oryza sativa subsp. japonica GN=OsACR7 PE=2 SV=1 Length = 452
Score = 101 bits (251), Expect = 2e-20 Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 1/108 (0%) Frame = +3
Query: 6 DRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAG-NVVDLKAVEAVRQSIG 182 DRVGLLSDVTRIFRE+GL+VTRA+V+T+ +KA+N FYV DAAG + VDLK +EA+RQ IG Sbjct: 350 DRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIG 409
Query: 183 KAVLQVKSPPSDCNIPSTKAXXXXXXXXXXXXXXXPAQVLYSLGLIKS 326 + VLQVK P P ++ + LYSLGLI+S Sbjct: 410 QTVLQVKGHPDHRKSPPQESPSRFLFSSLFR-----PRSLYSLGLIRS 452
>tr|Q75IY0|Q75IY0_ORYSJ Putative ACT domain containing protein, ACR4, with alternative splicing forms (ACT domain containing protein, putative, expressed) OS=Oryza sativa subsp. japonica GN=LOC_Os03g29980 PE=4 SV=1 Length = 374
Score = 101 bits (251), Expect = 2e-20 Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 1/108 (0%) Frame = +3
Query: 6 DRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAG-NVVDLKAVEAVRQSIG 182 DRVGLLSDVTRIFRE+GL+VTRA+V+T+ +KA+N FYV DAAG + VDLK +EA+RQ IG Sbjct: 272 DRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIG 331
Query: 183 KAVLQVKSPPSDCNIPSTKAXXXXXXXXXXXXXXXPAQVLYSLGLIKS 326 + VLQVK P P ++ + LYSLGLI+S Sbjct: 332 QTVLQVKGHPDHRKSPPQESPSRFLFSSLFR-----PRSLYSLGLIRS 374
>tr|A3AJ25|A3AJ25_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_010797 PE=4 SV=1 Length = 455
Score = 101 bits (251), Expect = 2e-20 Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 1/108 (0%) Frame = +3
Query: 6 DRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAG-NVVDLKAVEAVRQSIG 182 DRVGLLSDVTRIFRE+GL+VTRA+V+T+ +KA+N FYV DAAG + VDLK +EA+RQ IG Sbjct: 353 DRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIG 412
Query: 183 KAVLQVKSPPSDCNIPSTKAXXXXXXXXXXXXXXXPAQVLYSLGLIKS 326 + VLQVK P P ++ + LYSLGLI+S Sbjct: 413 QTVLQVKGHPDHRKSPPQESPSRFLFSSLFR-----PRSLYSLGLIRS 455
>tr|A2XHY2|A2XHY2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12028 PE=4 SV=1 Length = 455
Score = 101 bits (251), Expect = 2e-20 Identities = 58/108 (53%), Positives = 73/108 (67%), Gaps = 1/108 (0%) Frame = +3
Query: 6 DRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAG-NVVDLKAVEAVRQSIG 182 DRVGLLSDVTRIFRE+GL+VTRA+V+T+ +KA+N FYV DAAG + VDLK +EA+RQ IG Sbjct: 353 DRVGLLSDVTRIFRENGLTVTRAEVSTRGDKAVNTFYVRDAAGSSAVDLKTLEAIRQEIG 412
Query: 183 KAVLQVKSPPSDCNIPSTKAXXXXXXXXXXXXXXXPAQVLYSLGLIKS 326 + VLQVK P P ++ + LYSLGLI+S Sbjct: 413 QTVLQVKGHPDHRKSPPQESPSRFLFSSLFR-----PRSLYSLGLIRS 455
>tr|A9SSE7|A9SSE7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_187890 PE=4 SV=1 Length = 446
Score = 99.0 bits (245), Expect = 1e-19 Identities = 52/80 (65%), Positives = 66/80 (82%), Gaps = 1/80 (1%) Frame = +3
Query: 3 NDRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAGNVVDLKAVEAVRQSIG 182 NDRVGLLSDVTRIFRE+GLSV RAD+ T+ +KAINVFYV DA+G V++K VEA+R++IG Sbjct: 344 NDRVGLLSDVTRIFRENGLSVARADITTRHDKAINVFYVVDASGRPVNMKVVEAMRETIG 403
Query: 183 KAVLQVKS-PPSDCNIPSTK 239 + L+VK P S+ +PSTK Sbjct: 404 SS-LEVKGLPRSEPELPSTK 422
>tr|B7ZYV0|B7ZYV0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 440
Score = 97.8 bits (242), Expect = 3e-19 Identities = 47/75 (62%), Positives = 61/75 (81%) Frame = +3
Query: 6 DRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAGNVVDLKAVEAVRQSIGK 185 DRVGLLSDVTRIFRE+GL+VTRA+V+T+ ++A+N FYV DAAG+ V+L+ +EA+RQ IG+ Sbjct: 339 DRVGLLSDVTRIFRENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQ 398
Query: 186 AVLQVKSPPSDCNIP 230 VLQVK P P Sbjct: 399 TVLQVKGHPEQPKPP 413
>tr|B6SL14|B6SL14_MAIZE ACR4 OS=Zea mays PE=2 SV=1 Length = 458
Score = 97.8 bits (242), Expect = 3e-19 Identities = 47/75 (62%), Positives = 61/75 (81%) Frame = +3
Query: 6 DRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAGNVVDLKAVEAVRQSIGK 185 DRVGLLSDVTRIFRE+GL+VTRA+V+T+ ++A+N FYV DAAG+ V+L+ +EA+RQ IG+ Sbjct: 357 DRVGLLSDVTRIFRENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQ 416
Query: 186 AVLQVKSPPSDCNIP 230 VLQVK P P Sbjct: 417 TVLQVKGHPEQPKPP 431
>tr|B4G0N4|B4G0N4_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 458
Score = 97.8 bits (242), Expect = 3e-19 Identities = 47/75 (62%), Positives = 61/75 (81%) Frame = +3
Query: 6 DRVGLLSDVTRIFREHGLSVTRADVNTKDNKAINVFYVTDAAGNVVDLKAVEAVRQSIGK 185 DRVGLLSDVTRIFRE+GL+VTRA+V+T+ ++A+N FYV DAAG+ V+L+ +EA+RQ IG+ Sbjct: 357 DRVGLLSDVTRIFRENGLTVTRAEVSTRGDEAVNTFYVRDAAGSAVELRTLEAIRQEIGQ 416
Query: 186 AVLQVKSPPSDCNIP 230 VLQVK P P Sbjct: 417 TVLQVKGHPEQPKPP 431
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