BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914167|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_G03.
         (469 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6YCH2|TDPZ4_MOUSE TD and POZ domain-containing protein 4 OS=...    31   3.1  

>sp|Q6YCH2|TDPZ4_MOUSE TD and POZ domain-containing protein 4 OS=Mus
           musculus GN=Tdpoz4 PE=2 SV=1
          Length = 370

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +3

Query: 204 FKNLKNEAYVRASFSVFGGNPKPFIYALECELQDRCGRL 320
           F  L   + ++ SFS+ G NP+P I    C L+D  G L
Sbjct: 143 FTLLCKVSVLQDSFSISGQNPRPAIKVTRCTLEDDVGEL 181

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914167|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_G03.
         (469 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2JRP5|Q2JRP5_SYNJA MutS2 family protein OS=Synechococcus sp....    33   5.5  
tr|Q2GP43|Q2GP43_CHAGB Putative uncharacterized protein OS=Chaet...    33   7.1  
tr|B1XL71|B1XL71_SYNP2 DNA mismatch repair protein OS=Synechococ...    33   7.2  

>tr|Q2JRP5|Q2JRP5_SYNJA MutS2 family protein OS=Synechococcus sp.
           (strain JA-3-3Ab) GN=CYA_2582 PE=3 SV=1
          Length = 799

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 7/107 (6%)
 Frame = +3

Query: 123 KLLSPLVLFA---ISFDLRASPIINWFHTLFKNLKNEAYVRASFSVFGGNPK---PFIYA 284
           K L  LVL A   I    +  P + WF  ++ ++ +E  ++ S S F G+ +     + A
Sbjct: 367 KTLGLLVLMAKAGIFLPAQDPPQLPWFDGVYADIGDEQSLQQSLSTFSGHIRRISRIVQA 426

Query: 285 LECELQDRCGRLQHIHVQAQAS*GCCLQLSLFKVMAEVASITI-TSH 422
           L+ E       L  +      S G  L   L + +AE A +T+ T+H
Sbjct: 427 LQSEPAPALVLLDEVGAGTDPSEGAALAAGLLEYLAEKALLTLATTH 473


>tr|Q2GP43|Q2GP43_CHAGB Putative uncharacterized protein
           OS=Chaetomium globosum GN=CHGG_10261 PE=4 SV=1
          Length = 652

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 15/41 (36%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = -1

Query: 268 LGLPPN-TEKLART*ASFFRFLKRVWNQFIMGEALRSKEIA 149
           +G+PP   ++   T A+   FLK+ W  F+ G+A R++E+A
Sbjct: 525 MGIPPEIAQRCVLTNATTTEFLKQFWAAFLSGDAARTQELA 565


>tr|B1XL71|B1XL71_SYNP2 DNA mismatch repair protein OS=Synechococcus
           sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=mutS PE=4
           SV=1
          Length = 799

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
 Frame = +3

Query: 183 INWFHTLFKNLKNEAYVRASFSVFGGNPK---PFIYALECELQDRCGRLQHIHVQAQAS* 353
           I WF  +  ++ +E  ++ S S F G+ +     I AL+ E Q+    L  +      + 
Sbjct: 376 IPWFDQVLADIGDEQSLQQSLSTFSGHIRRVGRIIEALDQESQNNLVLLDEVGAGTDPTE 435

Query: 354 GCCLQLSLFKVMAEVASITI-TSH 422
           G  L ++L K +A+   +T+ T+H
Sbjct: 436 GSALAIALLKYLADQTQLTVATTH 459