BP914168
Clone id YMU001_000042_G04
Library
Length 422
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000042_G04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACTCAGGATCGATTAGCCAGCCTTGATAATTGTATAACTTTAGCAAAATTGTTATGTTG
TTGTACAACAGCAAAGCATCGTAAGTGGAATTCAAGTAGTATGTGACCTCGATTTCACCA
CATTGGAGAAACTACACGCATGGTGGCATTGTCAAATGTACAAAAAAAATGGCCTGCTGC
ATATTTGACAGGGCCATCTGATCAGCTTGTCCGTGATATGTGTAATTACTTTCCCATTAT
GACATGCTATTTGTCTGTGAGATACTATGTCTTCTGTGTCACCATCAGCATCGTTTTCCT
GTTAATCTAATAATAGACCATCAGCTTCCACCTACTGTTTCTTCAAAGCCTCTGTTAGTC
CCTTGATGGTCCCGGGAGTTGTACTGCAACAACCTCCTATCAGTGAGGCGCCTGCTTCTT
TC
■■Homology search results ■■ -
sp_hit_id Q9FUN0
Definition sp|Q9FUN0|HMT1_MAIZE Homocysteine S-methyltransferase 1 OS=Zea mays
Align length 27
Score (bit) 43.1
E-value 0.0004
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914168|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_G04.
(422 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9FUN0|HMT1_MAIZE Homocysteine S-methyltransferase 1 OS=Zea m... 43 4e-04
sp|P56707|SMTA_ASTBI Selenocysteine methyltransferase OS=Astraga... 40 0.003
sp|Q8LAX0|HMT3_ARATH Homocysteine S-methyltransferase 3 OS=Arabi... 40 0.005
sp|Q9SDL7|HMT1_ARATH Homocysteine S-methyltransferase 1 OS=Arabi... 39 0.008
sp|Q9FUM7|HMT4_MAIZE Homocysteine S-methyltransferase 4 OS=Zea m... 38 0.014
sp|Q9FUM9|HMT2_MAIZE Homocysteine S-methyltransferase 2 OS=Zea m... 36 0.054
sp|Q9FUM8|HMT3_MAIZE Homocysteine S-methyltransferase 3 OS=Zea m... 36 0.070
sp|Q9M1W4|HMT2_ARATH Homocysteine S-methyltransferase 2 OS=Arabi... 36 0.070
sp|Q04898|YM99_YEAST Putative uncharacterized protein YMR321C OS... 33 0.35
sp|Q08985|SAM4_YEAST Homocysteine S-methyltransferase 2 OS=Sacch... 33 0.35
sp|Q47690|MMUM_ECOLI Homocysteine S-methyltransferase OS=Escheri... 33 0.60
sp|O33259|METH_MYCTU Methionine synthase OS=Mycobacterium tuberc... 33 0.60
sp|Q49775|METH_MYCLE Methionine synthase OS=Mycobacterium leprae... 33 0.60
sp|A6H5Y3|METH_MOUSE Methionine synthase OS=Mus musculus GN=Mtr ... 32 0.78
sp|Q4JIJ3|METH_BOVIN Methionine synthase OS=Bos taurus GN=MTR PE... 32 1.0
sp|O52354|LDH_MYCGA L-lactate dehydrogenase OS=Mycoplasma gallis... 32 1.3
sp|Q55786|METH_SYNY3 Methionine synthase OS=Synechocystis sp. (s... 31 1.7
sp|O33465|METH_PSEPU Methionine synthase (Fragment) OS=Pseudomon... 31 1.7
sp|Q9I2Q2|METH_PSEAE Methionine synthase OS=Pseudomonas aerugino... 31 2.3
sp|Q99707|METH_HUMAN Methionine synthase OS=Homo sapiens GN=MTR ... 30 3.0
sp|Q12525|MHT1_YEAST Homocysteine S-methyltransferase 1 OS=Sacch... 30 3.9
sp|Q87L95|METH_VIBPA Methionine synthase OS=Vibrio parahaemolyti... 30 3.9
sp|Q9Z2Q4|METH_RAT Methionine synthase OS=Rattus norvegicus GN=M... 30 3.9
sp|P12577|L_PI3H4 Large structural protein OS=Human parainfluenz... 29 6.6
sp|Q7T3Q2|CRIM1_DANRE Cysteine-rich motor neuron 1 protein OS=Da... 29 6.6
sp|Q9KUW9|METH_VIBCH Methionine synthase OS=Vibrio cholerae GN=m... 29 8.6
sp|Q65SZ8|GLND_MANSM [Protein-PII] uridylyltransferase OS=Mannhe... 29 8.6

>sp|Q9FUN0|HMT1_MAIZE Homocysteine S-methyltransferase 1 OS=Zea mays
GN=HMT-1 PE=2 SV=1
Length = 323

Score = 43.1 bits (100), Expect = 4e-04
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALK 341
+EAGASLIGGCC TTP TI+ +++ LK
Sbjct: 292 QEAGASLIGGCCRTTPSTIRAVSKILK 318


>sp|P56707|SMTA_ASTBI Selenocysteine methyltransferase OS=Astragalus
bisulcatus GN=SMTA PE=1 SV=1
Length = 338

Score = 40.4 bits (93), Expect = 0.003
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = -2

Query: 418 EAGASLIGGCCSTTPGTIKGLTEAL 344
E+GASL+GGCC TTP TI+G+ + L
Sbjct: 303 ESGASLVGGCCRTTPDTIRGIYKIL 327


>sp|Q8LAX0|HMT3_ARATH Homocysteine S-methyltransferase 3
OS=Arabidopsis thaliana GN=HMT3 PE=1 SV=2
Length = 347

Score = 39.7 bits (91), Expect = 0.005
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKKQ 335
++AGASL GGCC TTP TI+ + + L +
Sbjct: 308 RDAGASLFGGCCRTTPNTIRAIAKVLSDE 336


>sp|Q9SDL7|HMT1_ARATH Homocysteine S-methyltransferase 1
OS=Arabidopsis thaliana GN=HMT-1 PE=1 SV=1
Length = 326

Score = 38.9 bits (89), Expect = 0.008
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKKQ 335
++ GA LIGGCC TTP TI ++ LK++
Sbjct: 298 RDLGAKLIGGCCRTTPSTINAISRDLKRR 326


>sp|Q9FUM7|HMT4_MAIZE Homocysteine S-methyltransferase 4 OS=Zea mays
GN=HMT-4 PE=2 SV=1
Length = 342

Score = 38.1 bits (87), Expect = 0.014
Identities = 13/28 (46%), Positives = 22/28 (78%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKK 338
+ AGA+LIGGCC T+P T++ + A+++
Sbjct: 303 RRAGAALIGGCCRTSPATVRAIARAVRE 330


>sp|Q9FUM9|HMT2_MAIZE Homocysteine S-methyltransferase 2 OS=Zea mays
GN=HMT-2 PE=2 SV=1
Length = 339

Score = 36.2 bits (82), Expect = 0.054
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = -2

Query: 412 GASLIGGCCSTTPGTIKGLTEALKK 338
GA LIGGCC TTP TI+ + L K
Sbjct: 304 GAVLIGGCCRTTPNTIRAIHRTLNK 328


>sp|Q9FUM8|HMT3_MAIZE Homocysteine S-methyltransferase 3 OS=Zea mays
GN=HMT-3 PE=2 SV=1
Length = 338

Score = 35.8 bits (81), Expect = 0.070
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2

Query: 412 GASLIGGCCSTTPGTIKGLTEALKK 338
GA+LIGGCC TTP TI+ + L +
Sbjct: 304 GAALIGGCCRTTPNTIRAIHRTLNQ 328


>sp|Q9M1W4|HMT2_ARATH Homocysteine S-methyltransferase 2
OS=Arabidopsis thaliana GN=HMT-2 PE=1 SV=1
Length = 333

Score = 35.8 bits (81), Expect = 0.070
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -2

Query: 418 EAGASLIGGCCSTTPGTIKGLTEAL 344
+AG SL+GGCC TTP TI+ + + L
Sbjct: 303 DAGVSLLGGCCRTTPTTIRAIHKRL 327


>sp|Q04898|YM99_YEAST Putative uncharacterized protein YMR321C
OS=Saccharomyces cerevisiae GN=YMR321C PE=4 SV=1
Length = 105

Score = 33.5 bits (75), Expect = 0.35
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -2

Query: 415 AGASLIGGCCSTTPGTIKGLTEALKK 338
+GA +IGGCC T+P I+ ++ A+KK
Sbjct: 78 SGARIIGGCCRTSPKDIQEISAAVKK 103


>sp|Q08985|SAM4_YEAST Homocysteine S-methyltransferase 2
OS=Saccharomyces cerevisiae GN=SAM4 PE=1 SV=1
Length = 325

Score = 33.5 bits (75), Expect = 0.35
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -2

Query: 415 AGASLIGGCCSTTPGTIKGLTEALKK 338
+GA +IGGCC T+P I+ ++ A+KK
Sbjct: 298 SGARIIGGCCRTSPKDIQEISAAVKK 323


tr_hit_id Q7XEH2
Definition tr|Q7XEH2|Q7XEH2_ORYSJ Os10g0422200 protein OS=Oryza sativa subsp. japonica
Align length 25
Score (bit) 43.5
E-value 0.005
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914168|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_G04.
(422 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q7XEH2|Q7XEH2_ORYSJ Os10g0422200 protein OS=Oryza sativa subs... 44 0.005
tr|A2Z7F0|A2Z7F0_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005
tr|Q8H825|Q8H825_ORYSJ Putative homocysteine S-methyltransferase... 43 0.007
tr|B8AQV5|B8AQV5_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.007
tr|B4FK22|B4FK22_MAIZE Homocysteine S-methyltransferase 1 OS=Zea... 43 0.007
tr|A9RGI7|A9RGI7_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.026
tr|A4ZGQ8|A4ZGQ8_BRAOT Homocysteine methyltransferase 1 OS=Brass... 41 0.034
tr|B0G1H1|B0G1H1_9FIRM Putative uncharacterized protein OS=Dorea... 40 0.057
tr|A7P379|A7P379_VITVI Chromosome chr1 scaffold_5, whole genome ... 40 0.057
tr|Q1AXR8|Q1AXR8_RUBXD Methylenetetrahydrofolate reductase OS=Ru... 40 0.075
tr|Q5ZBZ6|Q5ZBZ6_ORYSJ cDNA clone:001-116-A06, full insert seque... 40 0.075
tr|B8AA61|B8AA61_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.075
tr|A9RI39|A9RI39_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.13
tr|A9BAF6|A9BAF6_PROM4 Putative methionine synthase OS=Prochloro... 39 0.17
tr|B7BUP5|B7BUP5_9FIRM Putative uncharacterized protein OS=Roseb... 39 0.17
tr|A7VBG6|A7VBG6_9CLOT Putative uncharacterized protein OS=Clost... 39 0.17
tr|Q1GBT8|Q1GBT8_LACDA Homocysteine S-methyltransferase OS=Lacto... 38 0.22
tr|Q04C89|Q04C89_LACDB Homocysteine/selenocysteine methylase (S-... 38 0.22
tr|A9SFD6|A9SFD6_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.22
tr|A7PUD9|A7PUD9_VITVI Chromosome chr7 scaffold_31, whole genome... 38 0.22
tr|Q2QME6|Q2QME6_ORYSJ Os12g0607000 protein OS=Oryza sativa subs... 38 0.28
tr|Q1HL00|Q1HL00_CAMSI Selenocysteine methyltransferase OS=Camel... 38 0.28
tr|A6MZX1|A6MZX1_ORYSI Homocysteine s-methyltransferase 3 (Fragm... 38 0.28
tr|A2ZMI7|A2ZMI7_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.28
tr|A7NWS1|A7NWS1_VITVI Chromosome chr5 scaffold_2, whole genome ... 37 0.37
tr|Q65LG3|Q65LG3_BACLD Methylenetetrahydrofolate reductase OS=Ba... 37 0.49
tr|Q49V93|Q49V93_STAS1 Putative homocysteine S-methyltransferase... 37 0.49
tr|Q93A68|Q93A68_9BACT Methylenetetrahydrofolate reductase OS=un... 37 0.49
tr|B7AZJ1|B7AZJ1_9FIRM Putative uncharacterized protein OS=Mitsu... 37 0.49
tr|A0Z3S4|A0Z3S4_9GAMM Methionine synthase I OS=marine gamma pro... 37 0.49

>tr|Q7XEH2|Q7XEH2_ORYSJ Os10g0422200 protein OS=Oryza sativa subsp.
japonica GN=Os10g0422200 PE=2 SV=1
Length = 335

Score = 43.5 bits (101), Expect = 0.005
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = -2

Query: 418 EAGASLIGGCCSTTPGTIKGLTEAL 344
EAGASLIGGCC T+P TI+G+++AL
Sbjct: 308 EAGASLIGGCCRTSPDTIRGISKAL 332


>tr|A2Z7F0|A2Z7F0_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_33628 PE=4 SV=1
Length = 335

Score = 43.5 bits (101), Expect = 0.005
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = -2

Query: 418 EAGASLIGGCCSTTPGTIKGLTEAL 344
EAGASLIGGCC T+P TI+G+++AL
Sbjct: 308 EAGASLIGGCCRTSPDTIRGISKAL 332


>tr|Q8H825|Q8H825_ORYSJ Putative homocysteine S-methyltransferase-1
(Putative uncharacterized protein) (Homocysteine
S-methyltransferase 1, putative, expressed) OS=Oryza
sativa subsp. japonica GN=OJ1743A09.2 PE=4 SV=1
Length = 329

Score = 43.1 bits (100), Expect = 0.007
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALK 341
+EAGASL+GGCC TTP TI+ +++ LK
Sbjct: 293 QEAGASLVGGCCRTTPSTIRAVSKVLK 319


>tr|B8AQV5|B8AQV5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_10560 PE=4 SV=1
Length = 329

Score = 43.1 bits (100), Expect = 0.007
Identities = 17/27 (62%), Positives = 23/27 (85%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALK 341
+EAGASL+GGCC TTP TI+ +++ LK
Sbjct: 293 QEAGASLVGGCCRTTPSTIRAVSKVLK 319


>tr|B4FK22|B4FK22_MAIZE Homocysteine S-methyltransferase 1 OS=Zea
mays PE=2 SV=1
Length = 323

Score = 43.1 bits (100), Expect = 0.007
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALK 341
+EAGASLIGGCC TTP TI+ +++ LK
Sbjct: 292 QEAGASLIGGCCRTTPSTIRAVSKILK 318


>tr|A9RGI7|A9RGI7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_65820 PE=4 SV=1
Length = 341

Score = 41.2 bits (95), Expect = 0.026
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKK 338
+ AGA LIGGCC TTP TI+ +++AL++
Sbjct: 306 RNAGAQLIGGCCRTTPNTIEAISKALRE 333


>tr|A4ZGQ8|A4ZGQ8_BRAOT Homocysteine methyltransferase 1 OS=Brassica
oleracea var. italica GN=HMT1 PE=2 SV=1
Length = 326

Score = 40.8 bits (94), Expect = 0.034
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKKQ 335
++ GA LIGGCC TTP TIK ++ LK++
Sbjct: 298 RDLGAKLIGGCCRTTPSTIKAISRDLKRR 326


>tr|B0G1H1|B0G1H1_9FIRM Putative uncharacterized protein OS=Dorea
formicigenerans ATCC 27755 GN=DORFOR_00090 PE=4 SV=1
Length = 801

Score = 40.0 bits (92), Expect = 0.057
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = -2

Query: 412 GASLIGGCCSTTPGTIKGLTEALKKQ 335
GASLIGGCC TTP I+ + EA K Q
Sbjct: 266 GASLIGGCCGTTPAHIRAMVEATKDQ 291


>tr|A7P379|A7P379_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030336001
PE=4 SV=1
Length = 325

Score = 40.0 bits (92), Expect = 0.057
Identities = 15/28 (53%), Positives = 22/28 (78%)
Frame = -2

Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKK 338
++ GA LIGGCC TTP TI+ +++ LK+
Sbjct: 296 RDLGAKLIGGCCRTTPSTIRAISKVLKE 323


>tr|Q1AXR8|Q1AXR8_RUBXD Methylenetetrahydrofolate reductase
OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC
16129) GN=Rxyl_0843 PE=3 SV=1
Length = 611

Score = 39.7 bits (91), Expect = 0.075
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -2

Query: 418 EAGASLIGGCCSTTPGTIKGLTEALKK 338
EAGA +GGCC TTP I+ L+EAL++
Sbjct: 264 EAGARFVGGCCGTTPEHIRALSEALRE 290