BP914168 |
Clone id |
YMU001_000042_G04 |
Library |
YMU01 |
Length |
422 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000042_G04. |
Accession |
BP914168 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CACTCAGGATCGATTAGCCAGCCTTGATAATTGTATAACTTTAGCAAAATTGTTATGTTG TTGTACAACAGCAAAGCATCGTAAGTGGAATTCAAGTAGTATGTGACCTCGATTTCACCA CATTGGAGAAACTACACGCATGGTGGCATTGTCAAATGTACAAAAAAAATGGCCTGCTGC ATATTTGACAGGGCCATCTGATCAGCTTGTCCGTGATATGTGTAATTACTTTCCCATTAT GACATGCTATTTGTCTGTGAGATACTATGTCTTCTGTGTCACCATCAGCATCGTTTTCCT GTTAATCTAATAATAGACCATCAGCTTCCACCTACTGTTTCTTCAAAGCCTCTGTTAGTC CCTTGATGGTCCCGGGAGTTGTACTGCAACAACCTCCTATCAGTGAGGCGCCTGCTTCTT TC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9FUN0 |
Definition |
sp|Q9FUN0|HMT1_MAIZE Homocysteine S-methyltransferase 1 OS=Zea mays |
Align length |
27 |
Score (bit) |
43.1 |
E-value |
0.0004 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7XEH2 |
Definition |
tr|Q7XEH2|Q7XEH2_ORYSJ Os10g0422200 protein OS=Oryza sativa subsp. japonica |
Align length |
25 |
Score (bit) |
43.5 |
E-value |
0.005 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914168|Adiantum capillus-veneris mRNA, clone: YMU001_000042_G04. (422 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7XEH2|Q7XEH2_ORYSJ Os10g0422200 protein OS=Oryza sativa subs... 44 0.005 tr|A2Z7F0|A2Z7F0_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.005 tr|Q8H825|Q8H825_ORYSJ Putative homocysteine S-methyltransferase... 43 0.007 tr|B8AQV5|B8AQV5_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.007 tr|B4FK22|B4FK22_MAIZE Homocysteine S-methyltransferase 1 OS=Zea... 43 0.007 tr|A9RGI7|A9RGI7_PHYPA Predicted protein OS=Physcomitrella paten... 41 0.026 tr|A4ZGQ8|A4ZGQ8_BRAOT Homocysteine methyltransferase 1 OS=Brass... 41 0.034 tr|B0G1H1|B0G1H1_9FIRM Putative uncharacterized protein OS=Dorea... 40 0.057 tr|A7P379|A7P379_VITVI Chromosome chr1 scaffold_5, whole genome ... 40 0.057 tr|Q1AXR8|Q1AXR8_RUBXD Methylenetetrahydrofolate reductase OS=Ru... 40 0.075 tr|Q5ZBZ6|Q5ZBZ6_ORYSJ cDNA clone:001-116-A06, full insert seque... 40 0.075 tr|B8AA61|B8AA61_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.075 tr|A9RI39|A9RI39_PHYPA Predicted protein OS=Physcomitrella paten... 39 0.13 tr|A9BAF6|A9BAF6_PROM4 Putative methionine synthase OS=Prochloro... 39 0.17 tr|B7BUP5|B7BUP5_9FIRM Putative uncharacterized protein OS=Roseb... 39 0.17 tr|A7VBG6|A7VBG6_9CLOT Putative uncharacterized protein OS=Clost... 39 0.17 tr|Q1GBT8|Q1GBT8_LACDA Homocysteine S-methyltransferase OS=Lacto... 38 0.22 tr|Q04C89|Q04C89_LACDB Homocysteine/selenocysteine methylase (S-... 38 0.22 tr|A9SFD6|A9SFD6_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.22 tr|A7PUD9|A7PUD9_VITVI Chromosome chr7 scaffold_31, whole genome... 38 0.22 tr|Q2QME6|Q2QME6_ORYSJ Os12g0607000 protein OS=Oryza sativa subs... 38 0.28 tr|Q1HL00|Q1HL00_CAMSI Selenocysteine methyltransferase OS=Camel... 38 0.28 tr|A6MZX1|A6MZX1_ORYSI Homocysteine s-methyltransferase 3 (Fragm... 38 0.28 tr|A2ZMI7|A2ZMI7_ORYSI Putative uncharacterized protein OS=Oryza... 38 0.28 tr|A7NWS1|A7NWS1_VITVI Chromosome chr5 scaffold_2, whole genome ... 37 0.37 tr|Q65LG3|Q65LG3_BACLD Methylenetetrahydrofolate reductase OS=Ba... 37 0.49 tr|Q49V93|Q49V93_STAS1 Putative homocysteine S-methyltransferase... 37 0.49 tr|Q93A68|Q93A68_9BACT Methylenetetrahydrofolate reductase OS=un... 37 0.49 tr|B7AZJ1|B7AZJ1_9FIRM Putative uncharacterized protein OS=Mitsu... 37 0.49 tr|A0Z3S4|A0Z3S4_9GAMM Methionine synthase I OS=marine gamma pro... 37 0.49
>tr|Q7XEH2|Q7XEH2_ORYSJ Os10g0422200 protein OS=Oryza sativa subsp. japonica GN=Os10g0422200 PE=2 SV=1 Length = 335
Score = 43.5 bits (101), Expect = 0.005 Identities = 18/25 (72%), Positives = 23/25 (92%) Frame = -2
Query: 418 EAGASLIGGCCSTTPGTIKGLTEAL 344 EAGASLIGGCC T+P TI+G+++AL Sbjct: 308 EAGASLIGGCCRTSPDTIRGISKAL 332
>tr|A2Z7F0|A2Z7F0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_33628 PE=4 SV=1 Length = 335
Score = 43.5 bits (101), Expect = 0.005 Identities = 18/25 (72%), Positives = 23/25 (92%) Frame = -2
Query: 418 EAGASLIGGCCSTTPGTIKGLTEAL 344 EAGASLIGGCC T+P TI+G+++AL Sbjct: 308 EAGASLIGGCCRTSPDTIRGISKAL 332
>tr|Q8H825|Q8H825_ORYSJ Putative homocysteine S-methyltransferase-1 (Putative uncharacterized protein) (Homocysteine S-methyltransferase 1, putative, expressed) OS=Oryza sativa subsp. japonica GN=OJ1743A09.2 PE=4 SV=1 Length = 329
Score = 43.1 bits (100), Expect = 0.007 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -2
Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALK 341 +EAGASL+GGCC TTP TI+ +++ LK Sbjct: 293 QEAGASLVGGCCRTTPSTIRAVSKVLK 319
>tr|B8AQV5|B8AQV5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10560 PE=4 SV=1 Length = 329
Score = 43.1 bits (100), Expect = 0.007 Identities = 17/27 (62%), Positives = 23/27 (85%) Frame = -2
Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALK 341 +EAGASL+GGCC TTP TI+ +++ LK Sbjct: 293 QEAGASLVGGCCRTTPSTIRAVSKVLK 319
>tr|B4FK22|B4FK22_MAIZE Homocysteine S-methyltransferase 1 OS=Zea mays PE=2 SV=1 Length = 323
Score = 43.1 bits (100), Expect = 0.007 Identities = 18/27 (66%), Positives = 23/27 (85%) Frame = -2
Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALK 341 +EAGASLIGGCC TTP TI+ +++ LK Sbjct: 292 QEAGASLIGGCCRTTPSTIRAVSKILK 318
>tr|A9RGI7|A9RGI7_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_65820 PE=4 SV=1 Length = 341
Score = 41.2 bits (95), Expect = 0.026 Identities = 16/28 (57%), Positives = 23/28 (82%) Frame = -2
Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKK 338 + AGA LIGGCC TTP TI+ +++AL++ Sbjct: 306 RNAGAQLIGGCCRTTPNTIEAISKALRE 333
>tr|A4ZGQ8|A4ZGQ8_BRAOT Homocysteine methyltransferase 1 OS=Brassica oleracea var. italica GN=HMT1 PE=2 SV=1 Length = 326
Score = 40.8 bits (94), Expect = 0.034 Identities = 16/29 (55%), Positives = 22/29 (75%) Frame = -2
Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKKQ 335 ++ GA LIGGCC TTP TIK ++ LK++ Sbjct: 298 RDLGAKLIGGCCRTTPSTIKAISRDLKRR 326
>tr|B0G1H1|B0G1H1_9FIRM Putative uncharacterized protein OS=Dorea formicigenerans ATCC 27755 GN=DORFOR_00090 PE=4 SV=1 Length = 801
Score = 40.0 bits (92), Expect = 0.057 Identities = 17/26 (65%), Positives = 19/26 (73%) Frame = -2
Query: 412 GASLIGGCCSTTPGTIKGLTEALKKQ 335 GASLIGGCC TTP I+ + EA K Q Sbjct: 266 GASLIGGCCGTTPAHIRAMVEATKDQ 291
>tr|A7P379|A7P379_VITVI Chromosome chr1 scaffold_5, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00030336001 PE=4 SV=1 Length = 325
Score = 40.0 bits (92), Expect = 0.057 Identities = 15/28 (53%), Positives = 22/28 (78%) Frame = -2
Query: 421 KEAGASLIGGCCSTTPGTIKGLTEALKK 338 ++ GA LIGGCC TTP TI+ +++ LK+ Sbjct: 296 RDLGAKLIGGCCRTTPSTIRAISKVLKE 323
>tr|Q1AXR8|Q1AXR8_RUBXD Methylenetetrahydrofolate reductase OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=Rxyl_0843 PE=3 SV=1 Length = 611
Score = 39.7 bits (91), Expect = 0.075 Identities = 16/27 (59%), Positives = 21/27 (77%) Frame = -2
Query: 418 EAGASLIGGCCSTTPGTIKGLTEALKK 338 EAGA +GGCC TTP I+ L+EAL++ Sbjct: 264 EAGARFVGGCCGTTPEHIRALSEALRE 290
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