BP914171 |
Clone id |
YMU001_000042_G08 |
Library |
YMU01 |
Length |
417 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000042_G08. |
Accession |
BP914171 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGGAAGAATGCGGCCTTTTTTCTACTTTTATTTGGAATTGCAATTTAATCTGCTCAGCA AACTTTTCAAGAGTATTTCCCTTGCCAGTGTTCATGAACCGCTCTCTATCATCCAAGATC AAAACCACTGCATATGTCTCAAGAAACTTTTCTTTGTCCAATAATGGTGGCAGATGCAAC CAGCTAGAAGCTGAGCTCCTGTCCCCATTGTCGACATTCAAGGCTCCAAGCTTATCAGAA GCTGCATTTGTGAAGTACTCGGAACCAAAAGACTTGGTGAGCTGACCCGGCTTTACAAGG TCTGTTTGAACAGCATCTTCTGCTTCATCACTGTCAGAAGTGAGATCTATACATTCCTCC AGGGACATTACTTTGGAGCGTTCAGCCACCAATAAAGAAGGAAAAGGTGTGGAGCGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q7MUV9 |
Definition |
sp|Q7MUV9|G6PI_PORGI Glucose-6-phosphate isomerase OS=Porphyromonas gingivalis |
Align length |
85 |
Score (bit) |
32.3 |
E-value |
0.76 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7Q1V9 |
Definition |
tr|A7Q1V9|A7Q1V9_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
55 |
Score (bit) |
50.8 |
E-value |
3.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914171|Adiantum capillus-veneris mRNA, clone: YMU001_000042_G08. (417 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7Q1V9|A7Q1V9_VITVI Chromosome chr13 scaffold_45, whole genom... 51 3e-05 tr|A9RL95|A9RL95_PHYPA Predicted protein OS=Physcomitrella paten... 48 3e-04 tr|Q5W9E7|Q5W9E7_ARATH Endonuclease OS=Arabidopsis thaliana GN=A... 47 4e-04 tr|A1Z073|A1Z073_ARATH Endonuclease OS=Arabidopsis thaliana GN=M... 47 4e-04 tr|Q8GT06|Q8GT06_ORYSJ Endonuclease-like (Os01g0948100 protein) ... 45 0.002 tr|B8A954|B8A954_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002 tr|A3A1H9|A3A1H9_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002 tr|B3E6V0|B3E6V0_GEOLS ATPase associated with various cellular a... 40 0.044 tr|Q3E6S2|Q3E6S2_ARATH Uncharacterized protein At5g39770.1 OS=Ar... 37 0.49 tr|Q39ZQ3|Q39ZQ3_GEOMG ATPase associated with various cellular a... 35 2.4 tr|A5GDG5|A5GDG5_GEOUR ATPase associated with various cellular a... 35 2.4 tr|Q93XW9|Q93XW9_ARATH Putative uncharacterized protein At1g5057... 35 2.4 tr|Q747F8|Q747F8_GEOSL Putative uncharacterized protein OS=Geoba... 34 4.1 tr|B5EJ42|B5EJ42_GEOBB ATPase associated with various cellular a... 34 4.1 tr|B6FQ67|B6FQ67_9CLOT Putative uncharacterized protein OS=Clost... 34 4.1 tr|B3JYY8|B3JYY8_9DELT ATPase associated with various cellular a... 34 4.1 tr|Q9C6Q0|Q9C6Q0_ARATH Putative uncharacterized protein F17J6.9 ... 34 4.1 tr|A8EX50|A8EX50_ARCB4 Sigma factor regulatory protein, FecR/Pup... 33 5.4 tr|Q0YFV2|Q0YFV2_9DELT ATPase associated with various cellular a... 33 5.4 tr|A4TZY1|A4TZY1_9PROT Putative uncharacterized protein OS=Magne... 33 5.4 tr|Q6VEE1|Q6VEE1_EMIHU NADH dehydrogenase subunit 2 OS=Emiliania... 33 7.0 tr|B1B8U3|B1B8U3_CLOBO Phage protein OS=Clostridium botulinum C ... 33 9.2 tr|Q01QL2|Q01QL2_SOLUE ATPase associated with various cellular a... 33 9.2 tr|A9BHN6|A9BHN6_PETMO Putative uncharacterized protein OS=Petro... 33 9.2 tr|Q4UBC4|Q4UBC4_THEAN Putative uncharacterized protein OS=Theil... 33 9.2
>tr|A7Q1V9|A7Q1V9_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00028618001 PE=4 SV=1 Length = 276
Score = 50.8 bits (120), Expect = 3e-05 Identities = 28/55 (50%), Positives = 37/55 (67%) Frame = -2
Query: 179 LHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQFQIKVEKR 15 L +PPLL E+F + Y VVLILDDRE+F T +G+ K E I QF+I++E R Sbjct: 4 LTMPPLLVGERFEDVYEVVLILDDREQF--TTQGSRSRKIIENICTQFKIQIEVR 56
>tr|A9RL95|A9RL95_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_176090 PE=4 SV=1 Length = 651
Score = 47.8 bits (112), Expect = 3e-04 Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%) Frame = -2
Query: 173 LPPLLDKEKFLETYAVVLILDDRERFMNTGKGN-TLEKFAEQIKLQFQIKVEKR 15 +PPL + F + Y V L+LD RE+F +G L+KFA++I +QFQ++VE R Sbjct: 374 VPPLEVGQGFGQVYEVFLVLDSREQFRRDARGGAALQKFADRIGVQFQVQVETR 427
>tr|Q5W9E7|Q5W9E7_ARATH Endonuclease OS=Arabidopsis thaliana GN=AtMus81 PE=2 SV=1 Length = 659
Score = 47.4 bits (111), Expect = 4e-04 Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 3/89 (3%) Frame = -2
Query: 272 SFGSEYFTNAASDKL---GALNVDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRE 102 S GS + A S L G + N R LPPL E F E Y V+LILDDRE Sbjct: 360 SSGSSHAVKACSSSLASDGTKGITNIPR--------LPPLQFGETFEEAYDVILILDDRE 411
Query: 101 RFMNTGKGNTLEKFAEQIKLQFQIKVEKR 15 +F KG+ E I +F IK+E R Sbjct: 412 KFAT--KGSRSRNIVENICSEFNIKIEVR 438
>tr|A1Z073|A1Z073_ARATH Endonuclease OS=Arabidopsis thaliana GN=MUS81 PE=2 SV=1 Length = 660
Score = 47.4 bits (111), Expect = 4e-04 Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 3/89 (3%) Frame = -2
Query: 272 SFGSEYFTNAASDKL---GALNVDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRE 102 S GS + A S L G + N R LPPL E F E Y V+LILDDRE Sbjct: 361 SSGSSHAVKACSSSLASDGTKGITNIPR--------LPPLQFGETFEEAYDVILILDDRE 412
Query: 101 RFMNTGKGNTLEKFAEQIKLQFQIKVEKR 15 +F KG+ E I +F IK+E R Sbjct: 413 KFAT--KGSRSRNIVENICSEFNIKIEVR 439
>tr|Q8GT06|Q8GT06_ORYSJ Endonuclease-like (Os01g0948100 protein) OS=Oryza sativa subsp. japonica GN=P0466H10.31 PE=4 SV=1 Length = 660
Score = 45.1 bits (105), Expect = 0.002 Identities = 27/65 (41%), Positives = 34/65 (52%) Frame = -2
Query: 215 VDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQF 36 +DN +S L +PP + FLE Y VVLILDDRE F G K + I QF Sbjct: 380 LDNDTVCMDNSILAMPPRRSSKNFLEDYEVVLILDDRENF-----GGRSRKTVDNIHSQF 434
Query: 35 QIKVE 21 ++ VE Sbjct: 435 RVPVE 439
>tr|B8A954|B8A954_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05185 PE=4 SV=1 Length = 507
Score = 45.1 bits (105), Expect = 0.002 Identities = 27/65 (41%), Positives = 34/65 (52%) Frame = -2
Query: 215 VDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQF 36 +DN +S L +PP + FLE Y VVLILDDRE F G K + I QF Sbjct: 227 LDNDTVCMDNSILAMPPRRSSKNFLEDYEVVLILDDRENF-----GGRSRKTVDNIHSQF 281
Query: 35 QIKVE 21 ++ VE Sbjct: 282 RVPVE 286
>tr|A3A1H9|A3A1H9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004651 PE=4 SV=1 Length = 613
Score = 45.1 bits (105), Expect = 0.002 Identities = 27/65 (41%), Positives = 34/65 (52%) Frame = -2
Query: 215 VDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQF 36 +DN +S L +PP + FLE Y VVLILDDRE F G K + I QF Sbjct: 342 LDNDTVCMDNSILAMPPRRSSKNFLEDYEVVLILDDRENF-----GGRSRKTVDNIHSQF 396
Query: 35 QIKVE 21 ++ VE Sbjct: 397 RVPVE 401
>tr|B3E6V0|B3E6V0_GEOLS ATPase associated with various cellular activities AAA_5 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=Glov_2642 PE=4 SV=1 Length = 272
Score = 40.4 bits (93), Expect = 0.044 Identities = 21/62 (33%), Positives = 33/62 (53%) Frame = -2
Query: 320 EDAVQTDLVKPGQLTKSFGSEYFTNAASDKLGALNVDNGDRSSASSWLHLPPLLDKEKFL 141 ED + T ++ PG + GS + + G L +D G+R S SW L PLLD +++ Sbjct: 86 EDLIVTPVIGPGGTIQYVGSSLVSAMVNG--GVLILDEGNRMSEKSWASLAPLLDDRRYV 143
Query: 140 ET 135 E+ Sbjct: 144 ES 145
>tr|Q3E6S2|Q3E6S2_ARATH Uncharacterized protein At5g39770.1 OS=Arabidopsis thaliana GN=At5g39770 PE=4 SV=1 Length = 1242
Score = 37.0 bits (84), Expect = 0.49 Identities = 18/30 (60%), Positives = 20/30 (66%) Frame = -2
Query: 173 LPPLLDKEKFLETYAVVLILDDRERFMNTG 84 LPPL E F E Y V+LILDDRE+F G Sbjct: 983 LPPLRFGEAFEEVYDVILILDDREQFATKG 1012
>tr|Q39ZQ3|Q39ZQ3_GEOMG ATPase associated with various cellular activities OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=Gmet_0021 PE=4 SV=1 Length = 272
Score = 34.7 bits (78), Expect = 2.4 Identities = 20/62 (32%), Positives = 32/62 (51%) Frame = -2
Query: 320 EDAVQTDLVKPGQLTKSFGSEYFTNAASDKLGALNVDNGDRSSASSWLHLPPLLDKEKFL 141 ED + T ++ P + S + A K G L +D G+R S +W L PLLD +++ Sbjct: 86 EDLIITPVIGPDGKIQYAASSLVS--AMVKGGVLILDEGNRMSEKAWASLAPLLDDRRYV 143
Query: 140 ET 135 E+ Sbjct: 144 ES 145
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