BP914171
Clone id YMU001_000042_G08
Library
Length 417
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000042_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGGAAGAATGCGGCCTTTTTTCTACTTTTATTTGGAATTGCAATTTAATCTGCTCAGCA
AACTTTTCAAGAGTATTTCCCTTGCCAGTGTTCATGAACCGCTCTCTATCATCCAAGATC
AAAACCACTGCATATGTCTCAAGAAACTTTTCTTTGTCCAATAATGGTGGCAGATGCAAC
CAGCTAGAAGCTGAGCTCCTGTCCCCATTGTCGACATTCAAGGCTCCAAGCTTATCAGAA
GCTGCATTTGTGAAGTACTCGGAACCAAAAGACTTGGTGAGCTGACCCGGCTTTACAAGG
TCTGTTTGAACAGCATCTTCTGCTTCATCACTGTCAGAAGTGAGATCTATACATTCCTCC
AGGGACATTACTTTGGAGCGTTCAGCCACCAATAAAGAAGGAAAAGGTGTGGAGCGA
■■Homology search results ■■ -
sp_hit_id Q7MUV9
Definition sp|Q7MUV9|G6PI_PORGI Glucose-6-phosphate isomerase OS=Porphyromonas gingivalis
Align length 85
Score (bit) 32.3
E-value 0.76
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914171|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_G08.
(417 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7MUV9|G6PI_PORGI Glucose-6-phosphate isomerase OS=Porphyromo... 32 0.76
sp|Q6CM22|MED8_KLULA Mediator of RNA polymerase II transcription... 30 3.8
sp|Q16666|IF16_HUMAN Gamma-interferon-inducible protein Ifi-16 O... 30 3.8
sp|Q9FVI6|FWA_ARATH Homeobox-leucine zipper protein HDG6 OS=Arab... 30 3.8
sp|Q9Z0Y8|CAC1I_RAT Voltage-dependent T-type calcium channel sub... 30 3.8
sp|P34484|YMJ9_CAEEL Uncharacterized protein F59B2.9 OS=Caenorha... 30 4.9
sp|Q9Y5I3|PCDA1_HUMAN Protocadherin alpha-1 OS=Homo sapiens GN=P... 30 4.9
sp|Q6SJP2|B3A2_HORSE Anion exchange protein 2 OS=Equus caballus ... 30 4.9
sp|Q4FM20|SYV_PELUB Valyl-tRNA synthetase OS=Pelagibacter ubique... 29 6.4
sp|Q5DRF5|PCDA1_PANTR Protocadherin alpha-1 OS=Pan troglodytes G... 29 6.4
sp|Q61X54|MED1_CAEBR Mediator of RNA polymerase II transcription... 29 6.4
sp|Q5RD14|IF16_PONAB Gamma-interferon-inducible protein Ifi-16 O... 29 6.4
sp|P48746|B3A2_RABIT Anion exchange protein 2 OS=Oryctolagus cun... 29 6.4
sp|Q5QA94|ATG18_PICAN Autophagy-related protein 18 OS=Pichia ang... 29 6.4
sp|O00308|WWP2_HUMAN NEDD4-like E3 ubiquitin-protein ligase WWP2... 29 8.4
sp|Q06121|TRPC_SULSO Indole-3-glycerol phosphate synthase OS=Sul... 29 8.4
sp|Q5KE29|SHE9_CRYNE Sensitive to high expression protein 9 homo... 29 8.4
sp|P15685|MAL61_YEAST Maltose permease MAL61 OS=Saccharomyces ce... 29 8.4
sp|P38156|MAL31_YEAST Maltose permease MAL31 OS=Saccharomyces ce... 29 8.4
sp|Q148V7|K1468_MOUSE LisH domain and HEAT repeat-containing pro... 29 8.4

>sp|Q7MUV9|G6PI_PORGI Glucose-6-phosphate isomerase OS=Porphyromonas
gingivalis GN=pgi PE=3 SV=1
Length = 445

Score = 32.3 bits (72), Expect = 0.76
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 3/85 (3%)
Frame = -2

Query: 317 DAVQTDLVKPGQLTKSFGSEYFTNAASDKLGALNVDNGDRSSAS--SWLHLPPLLDKEKF 144
+ ++ DL K G S+G ++K AL +DNG + W+HLP + +E+
Sbjct: 2 ERIRLDLSKTGSSVASYGE------TAEKFNAL-LDNGTGRGSDFLGWVHLPSSITEEEL 54

Query: 143 LETYAVVLILDDR-ERFMNTGKGNT 72
A IL +R + +N G G +
Sbjct: 55 NAVEAAATILRERCDYVINVGIGGS 79


>sp|Q6CM22|MED8_KLULA Mediator of RNA polymerase II transcription
subunit 8 OS=Kluyveromyces lactis GN=MED8 PE=3 SV=2
Length = 215

Score = 30.0 bits (66), Expect = 3.8
Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 9/127 (7%)
Frame = -2

Query: 401 PSLLVAERSKVMSLEECIDLTSDSDEAEDAVQTDLVKPGQLTKSFGSEYFTNAASDKLGA 222
P + ++L + LT+ D E+ + + P + E K
Sbjct: 54 PQWYTLQAQLTVTLSQLSSLTNTLDHYEETLDATVAYPLPSFPTTAHEGLITTLMRKKNI 113

Query: 221 LNVD---------NGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTL 69
VD NG + S + L++K+K + ++A +LD+R + TG T
Sbjct: 114 PEVDEWIKDAKETNGLDVDSLSDAEIKKLINKDKDITSWATKCLLDERAKHSYTGLYTTK 173

Query: 68 EKFAEQI 48
E+ E I
Sbjct: 174 ERQTESI 180


>sp|Q16666|IF16_HUMAN Gamma-interferon-inducible protein Ifi-16
OS=Homo sapiens GN=IFI16 PE=1 SV=3
Length = 785

Score = 30.0 bits (66), Expect = 3.8
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 7/119 (5%)
Frame = -2

Query: 413 STPFPSLLVA--ERSKVMSLEECIDLTSDSDEAE----DAVQTDLVKPGQLTKSFGSEYF 252
STP S L R K E I+ ++ SD E +A ++ + +P + K F +
Sbjct: 546 STPSSSFLTTLKPRLKTEPEEVSIEDSAQSDLKEVMVLNATESFVYEPKEQKKMFHATVA 605

Query: 251 TNAASDKLGALNVDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILD-DRERFMNTGKG 78
T ++ N+D ++ + + + + + FLE Y L+ D + +R M KG
Sbjct: 606 TENEVFRVKVFNIDLKEKFTPKKIIAIANYVCRNGFLEVYPFTLVADVNADRNMEIPKG 664


>sp|Q9FVI6|FWA_ARATH Homeobox-leucine zipper protein HDG6
OS=Arabidopsis thaliana GN=HDG6 PE=1 SV=2
Length = 686

Score = 30.0 bits (66), Expect = 3.8
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = -2

Query: 164 LLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQFQI 30
L+D K++ +A ++ + + ++TG G T +QI+ +FQ+
Sbjct: 288 LMDTGKWVNVFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQV 332


>sp|Q9Z0Y8|CAC1I_RAT Voltage-dependent T-type calcium channel
subunit alpha-1I OS=Rattus norvegicus GN=Cacna1i PE=2
SV=3
Length = 2201

Score = 30.0 bits (66), Expect = 3.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +2

Query: 113 PRSKPLHMSQETFLCPIMVADATS*KLSSCPHCRH 217
PR PL + T + PI A+ SSCPHC+H
Sbjct: 489 PRHSPLDPTPHTLVQPISAILASD--PSSCPHCQH 521


>sp|P34484|YMJ9_CAEEL Uncharacterized protein F59B2.9
OS=Caenorhabditis elegans GN=F59B2.9 PE=2 SV=2
Length = 425

Score = 29.6 bits (65), Expect = 4.9
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = -2

Query: 233 KLGALNVDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRERFMNTGK 81
+L +N D D SS L P L+ E FLETY V+ +D R +TG+
Sbjct: 360 QLEKINRDYPDESSLERLLSNPNLVYTE-FLETYKVLKNMDGENRSPSTGQ 409


>sp|Q9Y5I3|PCDA1_HUMAN Protocadherin alpha-1 OS=Homo sapiens
GN=PCDHA1 PE=1 SV=1
Length = 950

Score = 29.6 bits (65), Expect = 4.9
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -2

Query: 395 LLVAERSKVMSLEECIDLTSDSDEAEDAVQTDLVKPGQLTKSFGSEYFTNAASDKLGALN 216
++ S++++ I+ +D+D +A+ T + P S+YF+ L+
Sbjct: 139 IIFIPESRLLNSRFPIEGAADADIGANALLTYTLSP--------SDYFS---------LD 181

Query: 215 VDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILD 111
V+ D S S WL L LD+E+ E + ++ D
Sbjct: 182 VEASDELSKSLWLELRKYLDREETPELHLLLTATD 216


>sp|Q6SJP2|B3A2_HORSE Anion exchange protein 2 OS=Equus caballus
GN=SLC4A2 PE=2 SV=1
Length = 1237

Score = 29.6 bits (65), Expect = 4.9
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Frame = -2

Query: 254 FTNAASDKLGALNVDNGDRSSASSWLHLPPLLDKEK-----FLETYAVVLILDDRERFMN 90
F+ A +K G + G++SS W+ + LL F+ET LI+ +ER +
Sbjct: 964 FSVTAPEKRGWVINPLGEKSSFPVWMMVASLLPAILVFILIFMETQITTLIISKKERMLQ 1023

Query: 89 TGKGNTLE 66
G G L+
Sbjct: 1024 KGSGFHLD 1031


>sp|Q4FM20|SYV_PELUB Valyl-tRNA synthetase OS=Pelagibacter ubique
GN=valS PE=3 SV=1
Length = 875

Score = 29.3 bits (64), Expect = 6.4
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2

Query: 161 LDKEKFLETYAVVLILDDRERFMNTGKGNTL 69
LDKE F + Y L+ D++ + M+ KGN +
Sbjct: 504 LDKEPFKDVYVHALVKDEKGQKMSKSKGNVI 534


>sp|Q5DRF5|PCDA1_PANTR Protocadherin alpha-1 OS=Pan troglodytes
GN=PCDHA1 PE=3 SV=1
Length = 950

Score = 29.3 bits (64), Expect = 6.4
Identities = 23/95 (24%), Positives = 44/95 (46%)
Frame = -2

Query: 395 LLVAERSKVMSLEECIDLTSDSDEAEDAVQTDLVKPGQLTKSFGSEYFTNAASDKLGALN 216
++ S++++ I+ +D+D +A+ T + P S+YF+ L+
Sbjct: 139 IIFIPESRLLNSRFPIEGAADADIGANALLTYTLSP--------SDYFS---------LD 181

Query: 215 VDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILD 111
V+ D S S WL L LD+E+ E + ++ D
Sbjct: 182 VEASDELSKSLWLELRKSLDREETPELHLLLTATD 216


tr_hit_id A7Q1V9
Definition tr|A7Q1V9|A7Q1V9_VITVI Chromosome chr13 scaffold_45, whole genome shotgun sequence OS=Vitis vinifera
Align length 55
Score (bit) 50.8
E-value 3.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914171|Adiantum capillus-veneris mRNA, clone:
YMU001_000042_G08.
(417 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7Q1V9|A7Q1V9_VITVI Chromosome chr13 scaffold_45, whole genom... 51 3e-05
tr|A9RL95|A9RL95_PHYPA Predicted protein OS=Physcomitrella paten... 48 3e-04
tr|Q5W9E7|Q5W9E7_ARATH Endonuclease OS=Arabidopsis thaliana GN=A... 47 4e-04
tr|A1Z073|A1Z073_ARATH Endonuclease OS=Arabidopsis thaliana GN=M... 47 4e-04
tr|Q8GT06|Q8GT06_ORYSJ Endonuclease-like (Os01g0948100 protein) ... 45 0.002
tr|B8A954|B8A954_ORYSI Putative uncharacterized protein OS=Oryza... 45 0.002
tr|A3A1H9|A3A1H9_ORYSJ Putative uncharacterized protein OS=Oryza... 45 0.002
tr|B3E6V0|B3E6V0_GEOLS ATPase associated with various cellular a... 40 0.044
tr|Q3E6S2|Q3E6S2_ARATH Uncharacterized protein At5g39770.1 OS=Ar... 37 0.49
tr|Q39ZQ3|Q39ZQ3_GEOMG ATPase associated with various cellular a... 35 2.4
tr|A5GDG5|A5GDG5_GEOUR ATPase associated with various cellular a... 35 2.4
tr|Q93XW9|Q93XW9_ARATH Putative uncharacterized protein At1g5057... 35 2.4
tr|Q747F8|Q747F8_GEOSL Putative uncharacterized protein OS=Geoba... 34 4.1
tr|B5EJ42|B5EJ42_GEOBB ATPase associated with various cellular a... 34 4.1
tr|B6FQ67|B6FQ67_9CLOT Putative uncharacterized protein OS=Clost... 34 4.1
tr|B3JYY8|B3JYY8_9DELT ATPase associated with various cellular a... 34 4.1
tr|Q9C6Q0|Q9C6Q0_ARATH Putative uncharacterized protein F17J6.9 ... 34 4.1
tr|A8EX50|A8EX50_ARCB4 Sigma factor regulatory protein, FecR/Pup... 33 5.4
tr|Q0YFV2|Q0YFV2_9DELT ATPase associated with various cellular a... 33 5.4
tr|A4TZY1|A4TZY1_9PROT Putative uncharacterized protein OS=Magne... 33 5.4
tr|Q6VEE1|Q6VEE1_EMIHU NADH dehydrogenase subunit 2 OS=Emiliania... 33 7.0
tr|B1B8U3|B1B8U3_CLOBO Phage protein OS=Clostridium botulinum C ... 33 9.2
tr|Q01QL2|Q01QL2_SOLUE ATPase associated with various cellular a... 33 9.2
tr|A9BHN6|A9BHN6_PETMO Putative uncharacterized protein OS=Petro... 33 9.2
tr|Q4UBC4|Q4UBC4_THEAN Putative uncharacterized protein OS=Theil... 33 9.2

>tr|A7Q1V9|A7Q1V9_VITVI Chromosome chr13 scaffold_45, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00028618001
PE=4 SV=1
Length = 276

Score = 50.8 bits (120), Expect = 3e-05
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -2

Query: 179 LHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQFQIKVEKR 15
L +PPLL E+F + Y VVLILDDRE+F T +G+ K E I QF+I++E R
Sbjct: 4 LTMPPLLVGERFEDVYEVVLILDDREQF--TTQGSRSRKIIENICTQFKIQIEVR 56


>tr|A9RL95|A9RL95_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_176090 PE=4 SV=1
Length = 651

Score = 47.8 bits (112), Expect = 3e-04
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Frame = -2

Query: 173 LPPLLDKEKFLETYAVVLILDDRERFMNTGKGN-TLEKFAEQIKLQFQIKVEKR 15
+PPL + F + Y V L+LD RE+F +G L+KFA++I +QFQ++VE R
Sbjct: 374 VPPLEVGQGFGQVYEVFLVLDSREQFRRDARGGAALQKFADRIGVQFQVQVETR 427


>tr|Q5W9E7|Q5W9E7_ARATH Endonuclease OS=Arabidopsis thaliana
GN=AtMus81 PE=2 SV=1
Length = 659

Score = 47.4 bits (111), Expect = 4e-04
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -2

Query: 272 SFGSEYFTNAASDKL---GALNVDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRE 102
S GS + A S L G + N R LPPL E F E Y V+LILDDRE
Sbjct: 360 SSGSSHAVKACSSSLASDGTKGITNIPR--------LPPLQFGETFEEAYDVILILDDRE 411

Query: 101 RFMNTGKGNTLEKFAEQIKLQFQIKVEKR 15
+F KG+ E I +F IK+E R
Sbjct: 412 KFAT--KGSRSRNIVENICSEFNIKIEVR 438


>tr|A1Z073|A1Z073_ARATH Endonuclease OS=Arabidopsis thaliana
GN=MUS81 PE=2 SV=1
Length = 660

Score = 47.4 bits (111), Expect = 4e-04
Identities = 35/89 (39%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
Frame = -2

Query: 272 SFGSEYFTNAASDKL---GALNVDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRE 102
S GS + A S L G + N R LPPL E F E Y V+LILDDRE
Sbjct: 361 SSGSSHAVKACSSSLASDGTKGITNIPR--------LPPLQFGETFEEAYDVILILDDRE 412

Query: 101 RFMNTGKGNTLEKFAEQIKLQFQIKVEKR 15
+F KG+ E I +F IK+E R
Sbjct: 413 KFAT--KGSRSRNIVENICSEFNIKIEVR 439


>tr|Q8GT06|Q8GT06_ORYSJ Endonuclease-like (Os01g0948100 protein)
OS=Oryza sativa subsp. japonica GN=P0466H10.31 PE=4 SV=1
Length = 660

Score = 45.1 bits (105), Expect = 0.002
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = -2

Query: 215 VDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQF 36
+DN +S L +PP + FLE Y VVLILDDRE F G K + I QF
Sbjct: 380 LDNDTVCMDNSILAMPPRRSSKNFLEDYEVVLILDDRENF-----GGRSRKTVDNIHSQF 434

Query: 35 QIKVE 21
++ VE
Sbjct: 435 RVPVE 439


>tr|B8A954|B8A954_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_05185 PE=4 SV=1
Length = 507

Score = 45.1 bits (105), Expect = 0.002
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = -2

Query: 215 VDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQF 36
+DN +S L +PP + FLE Y VVLILDDRE F G K + I QF
Sbjct: 227 LDNDTVCMDNSILAMPPRRSSKNFLEDYEVVLILDDRENF-----GGRSRKTVDNIHSQF 281

Query: 35 QIKVE 21
++ VE
Sbjct: 282 RVPVE 286


>tr|A3A1H9|A3A1H9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_004651 PE=4 SV=1
Length = 613

Score = 45.1 bits (105), Expect = 0.002
Identities = 27/65 (41%), Positives = 34/65 (52%)
Frame = -2

Query: 215 VDNGDRSSASSWLHLPPLLDKEKFLETYAVVLILDDRERFMNTGKGNTLEKFAEQIKLQF 36
+DN +S L +PP + FLE Y VVLILDDRE F G K + I QF
Sbjct: 342 LDNDTVCMDNSILAMPPRRSSKNFLEDYEVVLILDDRENF-----GGRSRKTVDNIHSQF 396

Query: 35 QIKVE 21
++ VE
Sbjct: 397 RVPVE 401


>tr|B3E6V0|B3E6V0_GEOLS ATPase associated with various cellular
activities AAA_5 OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=Glov_2642 PE=4 SV=1
Length = 272

Score = 40.4 bits (93), Expect = 0.044
Identities = 21/62 (33%), Positives = 33/62 (53%)
Frame = -2

Query: 320 EDAVQTDLVKPGQLTKSFGSEYFTNAASDKLGALNVDNGDRSSASSWLHLPPLLDKEKFL 141
ED + T ++ PG + GS + + G L +D G+R S SW L PLLD +++
Sbjct: 86 EDLIVTPVIGPGGTIQYVGSSLVSAMVNG--GVLILDEGNRMSEKSWASLAPLLDDRRYV 143

Query: 140 ET 135
E+
Sbjct: 144 ES 145


>tr|Q3E6S2|Q3E6S2_ARATH Uncharacterized protein At5g39770.1
OS=Arabidopsis thaliana GN=At5g39770 PE=4 SV=1
Length = 1242

Score = 37.0 bits (84), Expect = 0.49
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -2

Query: 173 LPPLLDKEKFLETYAVVLILDDRERFMNTG 84
LPPL E F E Y V+LILDDRE+F G
Sbjct: 983 LPPLRFGEAFEEVYDVILILDDREQFATKG 1012


>tr|Q39ZQ3|Q39ZQ3_GEOMG ATPase associated with various cellular
activities OS=Geobacter metallireducens (strain GS-15 /
ATCC 53774 / DSM 7210) GN=Gmet_0021 PE=4 SV=1
Length = 272

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = -2

Query: 320 EDAVQTDLVKPGQLTKSFGSEYFTNAASDKLGALNVDNGDRSSASSWLHLPPLLDKEKFL 141
ED + T ++ P + S + A K G L +D G+R S +W L PLLD +++
Sbjct: 86 EDLIITPVIGPDGKIQYAASSLVS--AMVKGGVLILDEGNRMSEKAWASLAPLLDDRRYV 143

Query: 140 ET 135
E+
Sbjct: 144 ES 145