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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914182
Clone id YMU001_000056_A04
Library
Length 486
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AAACAATCTACAAAGTAGATGTGATATGCTTGAAGATGCAAGTGCAATTTTGGGCTGTGC
AGCATGTTGCTCTGGCATTGAAAGTACAAGTGATGGGTCACTACACAACAATTGTTTGCA
AGAGAATTATTTATACACCGATGTGCTTGCAAGTGCTGTTGGTGGGAGACCTTTTATCGG
CCAGTTGCATAGTTCTCAAATAGACACCAATAACCAATTTTCACATCAAACATCCTCAAC
CAACAAATGTCCTCCTATGTATACGCAAAGCGGTTACGGAAGAGGCCAGCCATATCCCTA
GAAGAGGAGACAGCAAAAAGAAAGGAAAGGCAAATCACTTGGAGAGCTTATCTGATCCAG
TAGGCACTCTTTTGACCGGCATTTCTGGTCAGCCACACGCTGAAAGAGAGAAATTAAAAG
CAGCAAAGCCTAGGAAGGGAAAAGATTTCTCAAATGTGGTTAAAGTTGAAGATGGAAAGC
CTCTTC
■■Homology search results ■■ -
sp_hit_id Q9LQZ7
Definition sp|Q9LQZ7|STHX_ARATH Putative salt tolerance-like protein At1g75540 OS=Arabidopsis thaliana
Align length 90
Score (bit) 32.7
E-value 0.88
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914182|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_A04.
         (486 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LQZ7|STHX_ARATH Putative salt tolerance-like protein At1g75...    33   0.88 
sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sati...    30   4.4  
sp|P74181|GGT_SYNY3 Gamma-glutamyltranspeptidase OS=Synechocysti...    30   7.5  
sp|P78688|AREA_GIBFU Nitrogen regulatory protein areA OS=Gibbere...    29   9.8  

>sp|Q9LQZ7|STHX_ARATH Putative salt tolerance-like protein At1g75540
           OS=Arabidopsis thaliana GN=At1g75540 PE=1 SV=1
          Length = 331

 Score = 32.7 bits (73), Expect = 0.88
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 4/90 (4%)
 Frame = +2

Query: 2   NNLQSRCDMLEDASAILGC----AACCSGIESTSDGSLHNNCLQENYLYTDVLASAVGGR 169
           N     CD+ +D  A+L C    A  C   +S+   +  +    + +L T V  SA    
Sbjct: 54  NTSSPLCDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSV 113

Query: 170 PFIGQLHSSQIDTNNQFSHQTSSTNKCPPM 259
                  SS   +N  FS   SS +  PP+
Sbjct: 114 YKPTSKSSSSSSSNQDFSVPGSSISNPPPL 143


>sp|Q75LL6|TADA2_ORYSJ Transcriptional adapter ADA2 OS=Oryza sativa
           subsp. japonica GN=ADA2 PE=2 SV=2
          Length = 567

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 37/147 (25%), Positives = 52/147 (35%), Gaps = 5/147 (3%)
 Frame = +3

Query: 51  WA--VQHVALALKVQVMGHYTTIVCKRIIYTPMCLQVLLVGDLLSASCIVLK*TPITNFH 224
           WA   +HV    K Q + HYTT       Y                        P+ +  
Sbjct: 131 WAEVAEHVGTKTKAQCIDHYTTAYMNSPCY------------------------PLPDMS 166

Query: 225 IKHPQPTNVLLCIRKAVTEEASHIPRRGDSKKKGKANHLE---SLSDPVGTLLTGISGQP 395
             + +    LL + K   E    +P  GD   K ++        + D +G  L G S   
Sbjct: 167 HVNGKNRKELLAMAKVQGESKKVLP--GDLTPKDESPFSPPRVKVEDALGEGLAGRSPSH 224

Query: 396 HAEREKLKAAKPRKGKDFSNVVKVEDG 476
            A     KA+   + KD +NV KVEDG
Sbjct: 225 IAGGANKKASNVGQFKDGANVAKVEDG 251


>sp|P74181|GGT_SYNY3 Gamma-glutamyltranspeptidase OS=Synechocystis
           sp. (strain PCC 6803) GN=ggt PE=3 SV=1
          Length = 518

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
 Frame = +2

Query: 92  DGSLHNNCLQENYLYTDVLASAVGGRPFIGQL----HSSQIDTNNQFSHQTSSTNK 247
           DG+LH   ++  +L  D LAS +G   FI +L    H S +D     +  TSS  +
Sbjct: 303 DGNLHCGDIEAKFLGGDRLASELGQSKFINKLGSTTHISVLDGEGNAASLTSSNGE 358


>sp|P78688|AREA_GIBFU Nitrogen regulatory protein areA OS=Gibberella
           fujikuroi GN=AREA PE=3 SV=1
          Length = 971

 Score = 29.3 bits (64), Expect = 9.8
 Identities = 12/56 (21%), Positives = 28/56 (50%)
 Frame = +2

Query: 89  SDGSLHNNCLQENYLYTDVLASAVGGRPFIGQLHSSQIDTNNQFSHQTSSTNKCPP 256
           +D  ++N   Q+N+ ++   +  +   PF G  H+S + + +  ++  +S    PP
Sbjct: 351 NDSMVNNGNFQQNFSFSPSTSPMIPHGPFSGMYHNSSVPSASMSNNNNNSDFYSPP 406
tr_hit_id A7S9T0
Definition tr|A7S9T0|A7S9T0_NEMVE Predicted protein OS=Nematostella vectensis
Align length 93
Score (bit) 37.0
E-value 0.48
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914182|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_A04.
         (486 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7S9T0|A7S9T0_NEMVE Predicted protein OS=Nematostella vectens...    37   0.48 
tr|Q57DH3|Q57DH3_BRUAB ATP-dependent RNA helicase, DEAD/DEAH box...    34   4.1  
tr|Q2YNS8|Q2YNS8_BRUA2 ATP-dependent helicase, DEAD-box:DEAD/DEA...    34   4.1  
tr|B2S5G8|B2S5G8_BRUA1 ATP-dependent RNA helicase, DEAD/DEAH box...    34   4.1  
tr|A5DWT6|A5DWT6_LODEL Putative uncharacterized protein OS=Lodde...    34   4.1  
tr|A5UM93|A5UM93_METS3 Adhesin-like protein OS=Methanobrevibacte...    34   4.1  
tr|Q8YGX0|Q8YGX0_BRUME ATP-DEPENDENT RNA HELICASE DEAD OS=Brucel...    33   7.0  
tr|B4K6B5|B4K6B5_DROMO GI24679 OS=Drosophila mojavensis GN=GI246...    33   7.0  
tr|B3L0A0|B3L0A0_PLAKH Putative uncharacterized protein OS=Plasm...    33   7.0  
tr|A2QD32|A2QD32_ASPNC Putative uncharacterized protein OS=Asper...    33   7.0  
tr|Q8G0Z3|Q8G0Z3_BRUSU ATP-dependent RNA helicase, DEAD/DEAH box...    33   9.1  
tr|Q1H0U3|Q1H0U3_METFK Ribonuclease R OS=Methylobacillus flagell...    33   9.1  
tr|A9MAV7|A9MAV7_BRUC2 Probable ATP-dependent RNA helicase DDX17...    33   9.1  
tr|A9GGD0|A9GGD0_SORC5 Putative uncharacterized protein OS=Soran...    33   9.1  
tr|A5VQB4|A5VQB4_BRUO2 ATP-dependent RNA helicase, DEAD/DEAH box...    33   9.1  

>tr|A7S9T0|A7S9T0_NEMVE Predicted protein OS=Nematostella vectensis
           GN=v1g208976 PE=4 SV=1
          Length = 349

 Score = 37.0 bits (84), Expect = 0.48
 Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
 Frame = +3

Query: 228 KHPQPTNVLLCIRKAVTEE--------ASHIPRRGDSKKKGKANHLESLSDPVGTLLTGI 383
           K+ +P ++   I+K  +EE         ++I  + +SKK+ KAN     S P  +  T  
Sbjct: 206 KNTKPESLQEIIKKVESEEKTVINSTETANIAAKNESKKEEKANDAPRDSKPADSASTAA 265

Query: 384 SGQPHAEREKLKAAKPRKGKDFSNVVKVEDGKP 482
                  +  LKA +P K K+ +   K+ED  P
Sbjct: 266 DVIQAVAQNMLKALQPNKEKNTATPAKLEDTLP 298


>tr|Q57DH3|Q57DH3_BRUAB ATP-dependent RNA helicase, DEAD/DEAH box
           family OS=Brucella abortus GN=BruAb1_0947 PE=3 SV=1
          Length = 482

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
 Frame = +3

Query: 270 AVTEEASHIPRRG-DSKKKGKANHLESLSDPVGTLLTGISGQPHA------EREKLKAA- 425
           AV+EEA   PR+G +++ KGK    E  S+PV       +GQP         RE ++++ 
Sbjct: 381 AVSEEADEQPRKGRNARGKGKEKPKEKASNPVAAKTVDPAGQPQPVIENQHRREAIRSSN 440

Query: 426 KPRKGK 443
           + R+GK
Sbjct: 441 EERRGK 446


>tr|Q2YNS8|Q2YNS8_BRUA2 ATP-dependent helicase, DEAD-box:DEAD/DEAH
           box helicase:Helicase, C-terminal:ATP/GTP-binding site
           motif A (P-loop) OS=Brucella abortus (strain 2308)
           GN=BAB1_0955 PE=3 SV=1
          Length = 482

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
 Frame = +3

Query: 270 AVTEEASHIPRRG-DSKKKGKANHLESLSDPVGTLLTGISGQPHA------EREKLKAA- 425
           AV+EEA   PR+G +++ KGK    E  S+PV       +GQP         RE ++++ 
Sbjct: 381 AVSEEADEQPRKGRNARGKGKEKPKEKASNPVAAKTVDPAGQPQPVIENQHRREAIRSSN 440

Query: 426 KPRKGK 443
           + R+GK
Sbjct: 441 EERRGK 446


>tr|B2S5G8|B2S5G8_BRUA1 ATP-dependent RNA helicase, DEAD/DEAH box
           family OS=Brucella abortus (strain S19) GN=BAbS19_I08940
           PE=4 SV=1
          Length = 482

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
 Frame = +3

Query: 270 AVTEEASHIPRRG-DSKKKGKANHLESLSDPVGTLLTGISGQPHA------EREKLKAA- 425
           AV+EEA   PR+G +++ KGK    E  S+PV       +GQP         RE ++++ 
Sbjct: 381 AVSEEADEQPRKGRNARGKGKEKPKEKASNPVAAKTVDPAGQPQPVIENQHRREAIRSSN 440

Query: 426 KPRKGK 443
           + R+GK
Sbjct: 441 EERRGK 446


>tr|A5DWT6|A5DWT6_LODEL Putative uncharacterized protein
            OS=Lodderomyces elongisporus GN=LELG_01823 PE=4 SV=1
          Length = 1156

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 19/85 (22%)
 Frame = -2

Query: 233  MFDVKIGYWCLFENYATGR*KVSHQQHLQAHRCIN---------NSLANNCC-------- 105
            ++ +K+     F      + +   QQ  Q H CIN         N+  NNCC        
Sbjct: 1062 VYPIKLASTSSFRTPIQQQLQQQQQQQQQHHSCINCINCINRNNNNNNNNCCNRKLMLNL 1121

Query: 104  --VVTHHLYFQCQSNMLHSPKLHLH 36
               +   + F C  NML SP +HLH
Sbjct: 1122 MKTIQFSMQFVC--NMLGSPNIHLH 1144


>tr|A5UM93|A5UM93_METS3 Adhesin-like protein OS=Methanobrevibacter
           smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_1116
           PE=4 SV=1
          Length = 1491

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
 Frame = +2

Query: 95  GSLHNNCLQENYLYTD----VLASAVGGRPFIGQLHSSQIDTNN 214
           G  H N + +NYLYTD    +  S+ GG  F+G + +  +  NN
Sbjct: 211 GGAHYNYIADNYLYTDDANGIYLSSYGGGAFVGAISNYNVIFNN 254


>tr|Q8YGX0|Q8YGX0_BRUME ATP-DEPENDENT RNA HELICASE DEAD OS=Brucella
           melitensis GN=BMEI1035 PE=3 SV=1
          Length = 482

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
 Frame = +3

Query: 270 AVTEEASHIPRRG-DSKKKGKANHLESLSDPVGTLLTGISGQPHA------EREKLKAA- 425
           AV+EEA   PR+G +++ KGK    E  S PV       +GQP         RE ++++ 
Sbjct: 381 AVSEEADEQPRKGRNARGKGKEKPKEKASKPVAAKTVDPAGQPQPVIENQHRREAIRSSN 440

Query: 426 KPRKGK 443
           + R+GK
Sbjct: 441 EERRGK 446


>tr|B4K6B5|B4K6B5_DROMO GI24679 OS=Drosophila mojavensis GN=GI24679
           PE=4 SV=1
          Length = 643

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = -2

Query: 170 VSHQQHLQAHRCINNSLANNCCVVTHHLYFQCQSNMLHSPKLHLHLQ 30
           + HQ H Q H   NNS+  N   + HH +     NM H  + HL LQ
Sbjct: 219 LQHQLHQQQHLPSNNSIHTNMQQMHHHSH----QNMKHQQQHHLQLQ 261


>tr|B3L0A0|B3L0A0_PLAKH Putative uncharacterized protein OS=Plasmodium
            knowlesi (strain H) GN=PKH_031480 PE=4 SV=1
          Length = 2587

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 21/88 (23%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
 Frame = +3

Query: 210  ITNFHIKHPQPTNVLLCIRKAVTEEASHIPRRG-DSKKKGKANHLESLSDPVGTLLTGIS 386
            + NF + H  P N  LC R   + +++   R    + + G+AN     S P      G +
Sbjct: 2464 VVNFQVDHTHPFNTKLCARSKRSGDSTRQNRHAVPTGQPGQANQPGQASQPGQASQPGQA 2523

Query: 387  GQPH----AEREKLKAAKPRKGKDFSNV 458
             QP+      +++ +   P  G+DF+++
Sbjct: 2524 NQPNHHQTDHQQEQEELLPEGGRDFASL 2551


>tr|A2QD32|A2QD32_ASPNC Putative uncharacterized protein
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An02g05660 PE=4 SV=1
          Length = 667

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +3

Query: 213 TNFHIKHPQPTNVLLCIRKAVTEEASHIPRRGDSKKKGKANHLESLSDPVGTLL 374
           TN HI H   + VL  + +          R  +SK + K  HL+ LS+P GT++
Sbjct: 143 TNRHIPHSSLSTVLAPVTQV---------RHSESKTQEKIGHLQPLSEPAGTII 187