BP914185
Clone id YMU001_000056_A07
Library
Length 425
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_A07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTGTAGCACATTCCATCTTCACCTGCATGTCCTCATTTGTACGCTTGGATGCGTCCACTT
GGTCTTTATCCAACATAACCTCTTGCACAATCTCTTTCTCCTTACACACATTTACCACAT
CTGTGTCAACATGCATGAAATCATACTTTCATACCTTGAATGGGAAGTGTGAGGTCCCCA
ACCTGCCGACACCAAACATCGGATGGGGTCCTTGATAGGTCTCTATGACTAATAAAAATC
AGGGTCTCTAAACCAGAAAAATCCAAGGAATAGACCTTCACCATTGACAATGGCTTGGGT
CTATAGCCCTAGAAGAAGACATAGTCCTTTCTCGTAGCGGAAATGGGACAACACATTAAT
GACCCCAAAAGTCTTTCGACCCTATATATTCCACATATTGGGCTAATGTATCCTCAACCA
ACGCT
■■Homology search results ■■ -
sp_hit_id Q61851
Definition sp|Q61851|FGFR3_MOUSE Fibroblast growth factor receptor 3 OS=Mus musculus
Align length 87
Score (bit) 32.3
E-value 0.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914185|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_A07.
(425 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q61851|FGFR3_MOUSE Fibroblast growth factor receptor 3 OS=Mus... 32 0.80
sp|P22607|FGFR3_HUMAN Fibroblast growth factor receptor 3 OS=Hom... 32 0.80
sp|Q99JG7|TNIP2_MOUSE TNFAIP3-interacting protein 2 OS=Mus muscu... 31 2.3
sp|O42127|FGFR3_XENLA Fibroblast growth factor receptor 3 OS=Xen... 31 2.3
sp|Q91287|FGFR3_PLEWA Fibroblast growth factor receptor 3 OS=Ple... 31 2.3
sp|Q6DC66|BOKA_DANRE Bcl-2-related ovarian killer protein homolo... 31 2.3
sp|Q57705|Y257_METJA UPF0026 protein MJ0257 OS=Methanocaldococcu... 30 4.0
sp|A6LKP0|GCP_THEM4 Probable O-sialoglycoprotein endopeptidase O... 30 4.0
sp|O02799|STAT2_PIG Signal transducer and activator of transcrip... 30 5.2
sp|Q9I8X3|FGFR3_DANRE Fibroblast growth factor receptor 3 OS=Dan... 29 6.8

>sp|Q61851|FGFR3_MOUSE Fibroblast growth factor receptor 3 OS=Mus
musculus GN=Fgfr3 PE=1 SV=1
Length = 801

Score = 32.3 bits (72), Expect = 0.80
Identities = 27/87 (31%), Positives = 39/87 (44%)
Frame = +3

Query: 150 HTLNGKCEVPNLPTPNIGWGP**VSMTNKNQGL*TRKIQGIDLHH*QWLGSIALEEDIVL 329
+T+ +C PTP+I W + N + +I GI L H QW S+ + E +V
Sbjct: 164 NTVRFRCPAAGNPTPSISW------LKNGKEFRGEHRIGGIKLRHQQW--SLVM-ESVVP 214

Query: 330 SRSGNGTTH**PQKSFDPIYSTYWANV 410
S GN T + F I TY +V
Sbjct: 215 SDRGNYTCV--VENKFGSIRQTYTLDV 239


>sp|P22607|FGFR3_HUMAN Fibroblast growth factor receptor 3 OS=Homo
sapiens GN=FGFR3 PE=1 SV=1
Length = 806

Score = 32.3 bits (72), Expect = 0.80
Identities = 27/87 (31%), Positives = 39/87 (44%)
Frame = +3

Query: 150 HTLNGKCEVPNLPTPNIGWGP**VSMTNKNQGL*TRKIQGIDLHH*QWLGSIALEEDIVL 329
+T+ +C PTP+I W + N + +I GI L H QW S+ + E +V
Sbjct: 170 NTVRFRCPAAGNPTPSISW------LKNGREFRGEHRIGGIKLRHQQW--SLVM-ESVVP 220

Query: 330 SRSGNGTTH**PQKSFDPIYSTYWANV 410
S GN T + F I TY +V
Sbjct: 221 SDRGNYTCV--VENKFGSIRQTYTLDV 245


>sp|Q99JG7|TNIP2_MOUSE TNFAIP3-interacting protein 2 OS=Mus musculus
GN=Tnip2 PE=1 SV=1
Length = 430

Score = 30.8 bits (68), Expect = 2.3
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = -1

Query: 233 ISHRDLSRTPSDVWCRQVGDLTLPI-QGMKV*FHAC*HRCGKCV*GERDCARGYVG 69
++ ++ +R SDV CR + D T + + + H C H KC+ ER CA+G G
Sbjct: 131 VAEKEKARAASDVLCRSLADETHQLRRTLAATAHMCQH-LAKCL-DERQCAQGDAG 184


>sp|O42127|FGFR3_XENLA Fibroblast growth factor receptor 3
OS=Xenopus laevis GN=fgfr3 PE=2 SV=1
Length = 802

Score = 30.8 bits (68), Expect = 2.3
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +3

Query: 150 HTLNGKCEVPNLPTPNIGWGP**VSMTNKNQGL*TRKIQGIDLHH*QWLGSIALEEDIVL 329
+T+ +C PTP I W + N + +I GI L H QW S+ + E +V
Sbjct: 159 NTIRFRCPAAGNPTPTIHW------LKNGKEFRGEHRIGGIKLRHQQW--SLVM-ESVVP 209

Query: 330 SRSGNGT 350
S GN T
Sbjct: 210 SDKGNYT 216


>sp|Q91287|FGFR3_PLEWA Fibroblast growth factor receptor 3
OS=Pleurodeles waltlii GN=FGFR3 PE=2 SV=1
Length = 796

Score = 30.8 bits (68), Expect = 2.3
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +3

Query: 150 HTLNGKCEVPNLPTPNIGWGP**VSMTNKNQGL*TRKIQGIDLHH*QWLGSIALEEDIVL 329
+T+ +C PTP+I W + N + +I GI L H QW S+ + E +V
Sbjct: 159 NTVRFRCPAAGKPTPSITW------LKNGKEFKGEHRIGGIKLRHQQW--SLVM-ESVVP 209

Query: 330 SRSGNGT 350
S GN T
Sbjct: 210 SDRGNYT 216


>sp|Q6DC66|BOKA_DANRE Bcl-2-related ovarian killer protein homolog A
OS=Danio rerio GN=boka PE=2 SV=1
Length = 221

Score = 30.8 bits (68), Expect = 2.3
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Frame = +3

Query: 3 VAHSIFTCMSSFVRLDASTW-----SLSNITSCTI----SFSLHTFTTSVSTC 134
+ H+I CM FVR ++W ++IT C + SF H T+ C
Sbjct: 154 MVHTIVDCMGEFVRKSLASWLKKRGGWADITKCVVSTDPSFHSHWLVTAACAC 206


>sp|Q57705|Y257_METJA UPF0026 protein MJ0257 OS=Methanocaldococcus
jannaschii GN=MJ0257 PE=1 SV=1
Length = 311

Score = 30.0 bits (66), Expect = 4.0
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -1

Query: 302 RPKPLSMVKVYSLDFSGLETLIFISHRDLSRTPSDVWCRQ 183
R K L Y F G+ET HR + TPS +WC+Q
Sbjct: 30 RKKMLEDKNCYKSKFYGIET-----HRCIQCTPSVIWCQQ 64


>sp|A6LKP0|GCP_THEM4 Probable O-sialoglycoprotein endopeptidase
OS=Thermosipho melanesiensis (strain BI429 / DSM 12029)
GN=gcp PE=3 SV=1
Length = 325

Score = 30.0 bits (66), Expect = 4.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1

Query: 299 PKPLSMVKVYSLDFSGLETLIFISHRDLSRTPSD 198
PKPL K Y+ FSGL+T + + + L + P +
Sbjct: 196 PKPLYDSKDYNFSFSGLKTAVLYTIKKLDKIPKE 229


>sp|O02799|STAT2_PIG Signal transducer and activator of
transcription 2 OS=Sus scrofa GN=STAT2 PE=2 SV=1
Length = 864

Score = 29.6 bits (65), Expect = 5.2
Identities = 12/39 (30%), Positives = 24/39 (61%)
Frame = -2

Query: 145 YDFMHVDTDVVNVCKEKEIVQEVMLDKDQVDASKRTNED 29
+D H++TD + + + ++E+M + D + AS+ TN D
Sbjct: 805 HDLRHLNTDEMQIFRNSMRIEEIMPNGDPLLASQNTNVD 843


>sp|Q9I8X3|FGFR3_DANRE Fibroblast growth factor receptor 3 OS=Danio
rerio GN=fgfr3 PE=2 SV=1
Length = 800

Score = 29.3 bits (64), Expect = 6.8
Identities = 25/87 (28%), Positives = 39/87 (44%)
Frame = +3

Query: 150 HTLNGKCEVPNLPTPNIGWGP**VSMTNKNQGL*TRKIQGIDLHH*QWLGSIALEEDIVL 329
+T+ +C PTP+I W + N + +++ GI L H QW S+ +E +
Sbjct: 163 NTVKFRCPAAGNPTPSIHW------LKNGKEFKGEQRMGGIKLRHQQW--SLVMESAVPS 214

Query: 330 SRSGNGTTH**PQKSFDPIYSTYWANV 410
R GN T Q + I TY +V
Sbjct: 215 DR-GNYTCV--VQNKYGSIKHTYQLDV 238


tr_hit_id Q332H7
Definition tr|Q332H7|Q332H7_CBCP Putative uncharacterized protein OS=Clostridium botulinum C phage
Align length 59
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914185|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_A07.
(425 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q332H7|Q332H7_CBCP Putative uncharacterized protein OS=Clostr... 36 1.1
tr|A4QSD5|A4QSD5_MAGGR Putative uncharacterized protein OS=Magna... 35 1.4
tr|B4M9I6|B4M9I6_DROVI GJ18326 OS=Drosophila virilis GN=GJ18326 ... 33 5.3
tr|A7RZ99|A7RZ99_NEMVE Predicted protein (Fragment) OS=Nematoste... 33 5.3
tr|O67407|O67407_AQUAE Putative uncharacterized protein OS=Aquif... 33 7.0

>tr|Q332H7|Q332H7_CBCP Putative uncharacterized protein
OS=Clostridium botulinum C phage GN=CST049 PE=4 SV=1
Length = 210

Score = 35.8 bits (81), Expect = 1.1
Identities = 17/59 (28%), Positives = 34/59 (57%)
Frame = -2

Query: 178 GTSHFPFKV*KYDFMHVDTDVVNVCKEKEIVQEVMLDKDQVDASKRTNEDMQVKMECAT 2
GT F K+ + + ++VD D V V K+K+ ++E+ KD++ K + + +++C T
Sbjct: 115 GTEQFLIKLSELNALYVDKDKVQVVKKKQNIEEINKLKDKIQKLKDCKDILIDEIQCVT 173


>tr|A4QSD5|A4QSD5_MAGGR Putative uncharacterized protein
OS=Magnaporthe grisea GN=MGG_08653 PE=4 SV=1
Length = 410

Score = 35.4 bits (80), Expect = 1.4
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +3

Query: 60 WSLSNITSCTISFSLHTFTTSVSTCMKSYFHTLNGKCEVPNLPTPNIGW 206
W+ ++T I+ SL T T++S+ KS+ ++ CE P + T I W
Sbjct: 293 WTSLDLTMGIITASLPTLDTAISSGWKSFRSRMSSLCEEPKVKTKEISW 341


>tr|B4M9I6|B4M9I6_DROVI GJ18326 OS=Drosophila virilis GN=GJ18326
PE=4 SV=1
Length = 851

Score = 33.5 bits (75), Expect = 5.3
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = +3

Query: 78 TSCTISFSLHTFTTSVSTCMKSYFHTLNGKCEVPNLPTPNIGWGP**VSMTNKN 239
T C+ ++ TT+ ++ ++ N KCEV LPTPN P + N N
Sbjct: 18 TGCSYQLPVNMSTTTAASTVRHNVSVTNIKCEVEELPTPNGNLVPVIANYNNHN 71


>tr|A7RZ99|A7RZ99_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g98555 PE=4 SV=1
Length = 171

Score = 33.5 bits (75), Expect = 5.3
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Frame = +3

Query: 6 AHSIFTCMSSF-VRLDASTWSLSNIT---SCTISFSLHTFTTSVSTCMKSYFHT 155
AH+ FTC S +++ A T++ T SC I + HTFT S C+K HT
Sbjct: 96 AHT-FTCQPSCCIKITAHTFTSHTFTCHPSCCIKIAAHTFTCHPSCCIKIAAHT 148



Score = 32.7 bits (73), Expect = 9.1
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3

Query: 3 VAHSIFTCMSSF-VRLDASTWSLSNITSCTISFSLHTFTTSVSTCMKSYFHT 155
+A FTC S +++ A T++ SC I + HTFT S C+K HT
Sbjct: 64 IAAHTFTCRPSCCIKITAHTFTCR--PSCCIKITAHTFTCQPSCCIKITAHT 113


>tr|O67407|O67407_AQUAE Putative uncharacterized protein OS=Aquifex
aeolicus GN=aq_1408 PE=4 SV=1
Length = 279

Score = 33.1 bits (74), Expect = 7.0
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1

Query: 305 YRPKPLSMVKVYSLDFSGLETLIFISHRDLSRTPSDVWCRQVGDLTL 165
Y P+ L +K SLDF+G++ +I + HR + + +VG TL
Sbjct: 120 YTPENLEYIKRLSLDFAGIDRVIEVRHRSFANREFYEFVEEVGFSTL 166