BP914186
Clone id YMU001_000056_A08
Library
Length 533
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTTTTGAAATGAGCTTGTTTGATAGGCTAAAAGGCGGCTGGTATGTTGTATCAGTAACGT
CAACCCCCGCAAAGGTGAAAAAGGCTGTAGAGGCATCTTTAAAAGCCCTCAGAGGACTTC
GTGAGAATCCAATCAGCAAGAGAGATCTGGATAGGGCAAGAAGGACACTGATGATGCGGC
ATGAATCGGATTCCAAAGATAATTCATATTGGTTGGGTCTGCTAACTCATGTCCAATCAG
CTAAAGTATTCAGGAAGGTTGACGATGAGTCGGTTTTTACTTGCATGGGTATTGCGGGGG
CTCAGATAAGCAAAGCCAACCCTCCACTTGAAGAAGATGCAATTGAAGCTGGAAGTCTCC
CAGGCTCTTTGATGCATGGGAGGAGCATGTCTACAATGACAAGGCCAACGATGTGATTGG
AGTTGATGGCATGGTTTTACAAACGTAAGGTCTGCGAGGGTTGGGAATTGAAGCTAGCAA
CCCAATTCTGCAGTGTAACAAGTGTCCTATACACTCATTCTTATTCCATTATG
■■Homology search results ■■ -
sp_hit_id Q73PV6
Definition sp|Q73PV6|MNMA_TREDE tRNA-specific 2-thiouridylase mnmA OS=Treponema denticola
Align length 70
Score (bit) 29.6
E-value 9.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914186|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_A08.
(533 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q73PV6|MNMA_TREDE tRNA-specific 2-thiouridylase mnmA OS=Trepo... 30 9.5

>sp|Q73PV6|MNMA_TREDE tRNA-specific 2-thiouridylase mnmA
OS=Treponema denticola GN=mnmA PE=3 SV=1
Length = 366

Score = 29.6 bits (65), Expect = 9.5
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +3

Query: 132 ISKRDLDRARRTLMMRHESDSKDNSYWLGLLTHVQSAKVFRKVDDESVFTCMGIA-GAQI 308
I K +++ R L+ + E KD SY+L LLT Q ++ + D + IA A +
Sbjct: 125 IEKTEIEGDERFLLRQAEDAQKDQSYFLALLTQEQLSRSIFPLGDFTKEKVRSIAEDAGL 184

Query: 309 SKANPPLEED 338
A+ P +D
Sbjct: 185 INAHRPDSQD 194


tr_hit_id A9TJ83
Definition tr|A9TJ83|A9TJ83_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens
Align length 164
Score (bit) 157.0
E-value 2.0e-37
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914186|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_A08.
(533 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9TJ83|A9TJ83_PHYPA Predicted protein (Fragment) OS=Physcomit... 157 2e-37
tr|Q40983|Q40983_PEA Metalloendopeptidase OS=Pisum sativum PE=2 ... 147 3e-34
tr|A7QPK4|A7QPK4_VITVI Chromosome chr18 scaffold_137, whole geno... 143 5e-33
tr|O48870|O48870_ARATH Chloroplast processing enzyme OS=Arabidop... 135 2e-30
tr|Q69TY5|Q69TY5_ORYSJ Putative metalloendopeptidase OS=Oryza sa... 134 4e-30
tr|Q0DAU7|Q0DAU7_ORYSJ Os06g0625400 protein (Fragment) OS=Oryza ... 134 4e-30
tr|B8B0E2|B8B0E2_ORYSI Putative uncharacterized protein OS=Oryza... 134 4e-30
tr|B7ECD6|B7ECD6_ORYSJ cDNA clone:J013073O18, full insert sequen... 134 4e-30
tr|A3BDQ2|A3BDQ2_ORYSJ Putative uncharacterized protein OS=Oryza... 134 4e-30
tr|Q9FIH8|Q9FIH8_ARATH Pitrilysin OS=Arabidopsis thaliana GN=At5... 132 9e-30
tr|A8J6I8|A8J6I8_CHLRE Chloroplast processing enzyme OS=Chlamydo... 107 4e-22
tr|B8CCG1|B8CCG1_THAPS Stromal processing peptidase (Fragment) O... 69 1e-10
tr|A4S227|A4S227_OSTLU Predicted protein OS=Ostreococcus lucimar... 65 2e-09
tr|B5Y4R1|B5Y4R1_PHATR Predicted protein (Fragment) OS=Phaeodact... 60 5e-08
tr|A7AT11|A7AT11_BABBO Putative uncharacterized protein OS=Babes... 52 1e-05
tr|B6KNM1|B6KNM1_TOXGO M16 family peptidase, putative OS=Toxopla... 48 4e-04
tr|B0T8U4|B0T8U4_CAUSK Peptidase M16 domain protein OS=Caulobact... 47 6e-04
tr|B4WB17|B4WB17_9CAUL Peptidase M16 inactive domain family OS=B... 47 8e-04
tr|Q9A531|Q9A531_CAUCR Peptidase, M16 family OS=Caulobacter cres... 41 0.044
tr|B8H0V8|B8H0V8_CAUCR Peptidase, M16 family OS=Caulobacter cres... 41 0.044
tr|A5PBJ2|A5PBJ2_9SPHN Peptidase M16-like protein OS=Erythrobact... 40 0.057
tr|B2UPD6|B2UPD6_AKKM8 Peptidase M16 domain protein OS=Akkermans... 40 0.075
tr|A7V4X0|A7V4X0_BACUN Putative uncharacterized protein OS=Bacte... 40 0.075
tr|B0JC57|B0JC57_RHILT Peptidase M16 domain protein OS=Rhizobium... 38 0.37
tr|A0LZI8|A0LZI8_GRAFK Zinc protease PqqL OS=Gramella forsetii (... 37 0.63
tr|A9EAW6|A9EAW6_9FLAO Putative zinc protease OS=Kordia algicida... 37 0.63
tr|A1ZSQ3|A1ZSQ3_9SPHI Putative zinc protease OS=Microscilla mar... 37 0.63
tr|Q64XK8|Q64XK8_BACFR Putative zinc protease OS=Bacteroides fra... 37 0.83
tr|Q5LGR0|Q5LGR0_BACFN Putative zinc protease OS=Bacteroides fra... 37 0.83
tr|B6KM90|B6KM90_TOXGO M16 family peptidase, putative OS=Toxopla... 37 0.83

>tr|A9TJ83|A9TJ83_PHYPA Predicted protein (Fragment) OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_146335 PE=3 SV=1
Length = 1117

Score = 157 bits (398), Expect = 2e-37
Identities = 84/164 (51%), Positives = 108/164 (65%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE+SLFDRLK GW+V+SVTSTPAK+K AV+ASL LR ++ + I++R+LDRA+RTL+MRH
Sbjct: 954 FELSLFDRLKAGWFVISVTSTPAKIKYAVDASLNVLRSIQGSRINQRELDRAKRTLLMRH 1013

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFRK----------------------------VDDESVF 278
ESDSKDN+YWLGLLTH+Q+ V RK +D+ S+F
Sbjct: 1014 ESDSKDNTYWLGLLTHLQAPSVSRKDVGCLRDLPFLYEVATAEDVYNAYNYLSLDETSLF 1073

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
TCMGIAGA++ K ++E E + HGR MSTMTRPT
Sbjct: 1074 TCMGIAGAEVDK-ETVIQEVIDEESVATMPMTHGRGMSTMTRPT 1116


>tr|Q40983|Q40983_PEA Metalloendopeptidase OS=Pisum sativum PE=2 SV=1
Length = 1259

Score = 147 bits (371), Expect = 3e-34
Identities = 83/166 (50%), Positives = 108/166 (65%), Gaps = 30/166 (18%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE++LFDRLK GWYVVSVTSTP+KV KAV+A LRGL N I+ R+LDRA+RTL+MRH
Sbjct: 1095 FELNLFDRLKLGWYVVSVTSTPSKVHKAVDACKNVLRGLHSNGITVRELDRAKRTLLMRH 1154

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFR----------------------------KVDDESVF 278
E++ K N+YWLGLL H+QS+ V R KVD++S++
Sbjct: 1155 EAEIKSNAYWLGLLAHLQSSSVPRKDLSCIKDLTSLYEAATIEDTCLAYEQLKVDEDSLY 1214

Query: 279 TCMGIAGAQISK--ANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
+C+G++GAQ ++ A P EE+A E PG L GR +STMTRPT
Sbjct: 1215 SCIGVSGAQAAQDIAAPVEEEEAGE--GYPGVLPMGRGLSTMTRPT 1258


>tr|A7QPK4|A7QPK4_VITVI Chromosome chr18 scaffold_137, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002974001
PE=3 SV=1
Length = 1257

Score = 143 bits (361), Expect = 5e-33
Identities = 79/164 (48%), Positives = 106/164 (64%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE+SLFDRLK GWYV+SVTSTP KV KAV+A LRGL + I++R+LDRA+RTL+MRH
Sbjct: 1095 FELSLFDRLKLGWYVISVTSTPGKVYKAVDACKNVLRGLHSSKIAQRELDRAKRTLLMRH 1154

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFR----------------------------KVDDESVF 278
E+++K N+YWLGLL H+Q++ V R KVD+ S++
Sbjct: 1155 EAETKANAYWLGLLAHLQASTVPRKDISCIKDLTSLYEAATIEDIYLAYEQLKVDENSLY 1214

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
+C+GIAGAQ ++ EE++ E L G + GR +STMTRPT
Sbjct: 1215 SCIGIAGAQAAEEISVEEEESDE--GLQGVIPAGRGLSTMTRPT 1256


>tr|O48870|O48870_ARATH Chloroplast processing enzyme OS=Arabidopsis
thaliana GN=CPE PE=3 SV=1
Length = 1265

Score = 135 bits (339), Expect = 2e-30
Identities = 74/164 (45%), Positives = 97/164 (59%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE++LFDRLK GWYV+SVTSTP KV KAV+A LRGL N I+ R+LDRA+RTL+MRH
Sbjct: 1101 FELNLFDRLKLGWYVISVTSTPGKVYKAVDACKNVLRGLHSNQIAPRELDRAKRTLLMRH 1160

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFRK----------------------------VDDESVF 278
E++ K N+YWL LL H+Q++ V RK VD++S++
Sbjct: 1161 EAELKSNAYWLNLLAHLQASSVQRKELSCIKELVSLYEAASIEDIYLAYNQLRVDEDSLY 1220

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
+C+GIAGAQ + L E+ G + GR S TRPT
Sbjct: 1221 SCIGIAGAQAGEEITVLSEEEEPEDVFSGVVPVGRGSSMTTRPT 1264


>tr|Q69TY5|Q69TY5_ORYSJ Putative metalloendopeptidase OS=Oryza sativa
subsp. japonica GN=OSJNBa0029G06.38-1 PE=3 SV=1
Length = 988

Score = 134 bits (336), Expect = 4e-30
Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE++LFD+L GWYV++VTSTP+KV KAV+A LRGL N I +R+LDRA+RTL+M+H
Sbjct: 827 FELNLFDKLDLGWYVIAVTSTPSKVHKAVDACKGVLRGLHSNKIVERELDRAKRTLLMKH 886

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFR----------------------------KVDDESVF 278
E+++K N+YWLGLL H+QS+ V R KVD+ S+F
Sbjct: 887 EAETKTNAYWLGLLAHLQSSSVPRKEISCIKELTMLYESATIEDLYLAYEHLKVDESSLF 946

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
C+GIAGA+ + +D ++ G + GR +STMTRPT
Sbjct: 947 ACIGIAGAE---SGEETTDDELDMGLHGMGPIGGRGLSTMTRPT 987


>tr|Q0DAU7|Q0DAU7_ORYSJ Os06g0625400 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os06g0625400 PE=3 SV=1
Length = 846

Score = 134 bits (336), Expect = 4e-30
Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE++LFD+L GWYV++VTSTP+KV KAV+A LRGL N I +R+LDRA+RTL+M+H
Sbjct: 685 FELNLFDKLDLGWYVIAVTSTPSKVHKAVDACKGVLRGLHSNKIVERELDRAKRTLLMKH 744

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFR----------------------------KVDDESVF 278
E+++K N+YWLGLL H+QS+ V R KVD+ S+F
Sbjct: 745 EAETKTNAYWLGLLAHLQSSSVPRKEISCIKELTMLYESATIEDLYLAYEHLKVDESSLF 804

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
C+GIAGA+ + +D ++ G + GR +STMTRPT
Sbjct: 805 ACIGIAGAE---SGEETTDDELDMGLHGMGPIGGRGLSTMTRPT 845


>tr|B8B0E2|B8B0E2_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_23765 PE=4 SV=1
Length = 1088

Score = 134 bits (336), Expect = 4e-30
Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE++LFD+L GWYV++VTSTP+KV KAV+A LRGL N I +R+LDRA+RTL+M+H
Sbjct: 927 FELNLFDKLDLGWYVIAVTSTPSKVHKAVDACKGVLRGLHSNKIVERELDRAKRTLLMKH 986

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFR----------------------------KVDDESVF 278
E+++K N+YWLGLL H+QS+ V R KVD+ S+F
Sbjct: 987 EAETKTNAYWLGLLAHLQSSSVPRKEISCIKELTMLYESATIEDLYLAYEHLKVDESSLF 1046

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
C+GIAGA+ + +D ++ G + GR +STMTRPT
Sbjct: 1047 ACIGIAGAE---SGEETTDDELDMGLHGMGPIGGRGLSTMTRPT 1087


>tr|B7ECD6|B7ECD6_ORYSJ cDNA clone:J013073O18, full insert sequence
OS=Oryza sativa subsp. japonica PE=2 SV=1
Length = 837

Score = 134 bits (336), Expect = 4e-30
Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE++LFD+L GWYV++VTSTP+KV KAV+A LRGL N I +R+LDRA+RTL+M+H
Sbjct: 676 FELNLFDKLDLGWYVIAVTSTPSKVHKAVDACKGVLRGLHSNKIVERELDRAKRTLLMKH 735

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFR----------------------------KVDDESVF 278
E+++K N+YWLGLL H+QS+ V R KVD+ S+F
Sbjct: 736 EAETKTNAYWLGLLAHLQSSSVPRKEISCIKELTMLYESATIEDLYLAYEHLKVDESSLF 795

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
C+GIAGA+ + +D ++ G + GR +STMTRPT
Sbjct: 796 ACIGIAGAE---SGEETTDDELDMGLHGMGPIGGRGLSTMTRPT 836


>tr|A3BDQ2|A3BDQ2_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_021174 PE=3 SV=1
Length = 1203

Score = 134 bits (336), Expect = 4e-30
Identities = 73/164 (44%), Positives = 101/164 (61%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE++LFD+L GWYV++VTSTP+KV KAV+A LRGL N I +R+LDRA+RTL+M+H
Sbjct: 1042 FELNLFDKLDLGWYVIAVTSTPSKVHKAVDACKGVLRGLHSNKIVERELDRAKRTLLMKH 1101

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFR----------------------------KVDDESVF 278
E+++K N+YWLGLL H+QS+ V R KVD+ S+F
Sbjct: 1102 EAETKTNAYWLGLLAHLQSSSVPRKEISCIKELTMLYESATIEDLYLAYEHLKVDESSLF 1161

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
C+GIAGA+ + +D ++ G + GR +STMTRPT
Sbjct: 1162 ACIGIAGAE---SGEETTDDELDMGLHGMGPIGGRGLSTMTRPT 1202


>tr|Q9FIH8|Q9FIH8_ARATH Pitrilysin OS=Arabidopsis thaliana
GN=At5g42390 PE=2 SV=1
Length = 1265

Score = 132 bits (333), Expect = 9e-30
Identities = 73/164 (44%), Positives = 96/164 (58%), Gaps = 28/164 (17%)
Frame = +3

Query: 3 FEMSLFDRLKGGWYVVSVTSTPAKVKKAVEASLKALRGLRENPISKRDLDRARRTLMMRH 182
FE++LFDRL GWYV+SVTSTP KV KAV+A LRGL N I+ R+LDRA+RTL+MRH
Sbjct: 1101 FELNLFDRLNLGWYVISVTSTPGKVYKAVDACKSVLRGLHSNQIAPRELDRAKRTLLMRH 1160

Query: 183 ESDSKDNSYWLGLLTHVQSAKVFRK----------------------------VDDESVF 278
E++ K N+YWL LL H+Q++ V RK VD++S++
Sbjct: 1161 EAELKSNAYWLNLLAHLQASSVPRKELSCIKELVSLYEAASIEDIYLAYNQLRVDEDSLY 1220

Query: 279 TCMGIAGAQISKANPPLEEDAIEAGSLPGSLMHGRSMSTMTRPT 410
+C+GIAGAQ + L E+ G + GR S TRPT
Sbjct: 1221 SCIGIAGAQAGEEITVLSEEEEPEDVFSGVVPVGRGSSMTTRPT 1264