BP914190
Clone id YMU001_000056_A12
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
GAGACGCCGTGAATTCCACTTTTGAGCGTAGCACTGCAAGTGTCACTAATGTGAGGTACC
TCTTGTAGTGTTTATGAGAGGTGGAGTGTGAGATATAGAGGATAACCAATGAGTAAAAAA
GAGTCTTGGAAGGGAAGAGATGGAGTGAGAGAGTAGTTTAGATAGAGCAAATAATAACAA
CGATACTAGAAATTGCTCATATTTTTAAGTTTAGTAGATTCAAGTTCAAAGATATTTGCA
ATGGCTCCTAGAAAGAATGTTGGTGTTGGTGCATATGTCGAATTCATTTACTACGGTGAC
ACAATTGGGCAAGGACAAATTGGTAAGAGATCCAACTTAGCCCAATTACATGGGTGAAAA
CTACCTTCTGGTTATGCTATTTATGTTCCGACTTGAGTTGGCGGTTGTTCACGAGCTTCG
GCGTACACTTTGGTGAATTGTCGACGGTCATGCAAACTATGCTTATAAAGGTTTAAATAA
GTTAAAAACAAAAAGATCCCTCCCCCCAGGCATCTGAGGTGCGTTGGAGATATTCTCTCT
CATCT
■■Homology search results ■■ -
sp_hit_id A8MWK0
Definition sp|A8MWK0|FAD2L_HUMAN Fatty acid desaturase 2-like protein OS=Homo sapiens
Align length 40
Score (bit) 30.4
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914190|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_A12.
(545 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A8MWK0|FAD2L_HUMAN Fatty acid desaturase 2-like protein OS=Ho... 30 5.8

>sp|A8MWK0|FAD2L_HUMAN Fatty acid desaturase 2-like protein OS=Homo
sapiens PE=3 SV=2
Length = 482

Score = 30.4 bits (67), Expect = 5.8
Identities = 11/40 (27%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +3

Query: 366 FWLCYLCSDLSW-----RLFTSFGVHFGELSTVMQTMLIK 470
+W+C+ D++W F +FG+++G T++ L+K
Sbjct: 329 YWVCFSLQDITWVSSFYIYFITFGLYYGIFGTMLLIYLVK 368


tr_hit_id Q6PYA6
Definition tr|Q6PYA6|Q6PYA6_9ARAC ATP synthase subunit a OS=Habronattus oregonensis
Align length 61
Score (bit) 34.7
E-value 3.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914190|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_A12.
(545 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6PYA6|Q6PYA6_9ARAC ATP synthase subunit a OS=Habronattus ore... 35 3.4
tr|A7SWR2|A7SWR2_NEMVE Predicted protein (Fragment) OS=Nematoste... 34 5.8

>tr|Q6PYA6|Q6PYA6_9ARAC ATP synthase subunit a OS=Habronattus
oregonensis GN=ATPase6 PE=3 SV=1
Length = 219

Score = 34.7 bits (78), Expect = 3.4
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 10/61 (16%)
Frame = +2

Query: 236 LQWLLERMLVLVHMSNSFTTVTQ----------LGKDKLVRDPT*PNYMGENYLLVMLFM 385
L WL+ MLVLV + + V +G K+ R+ + PNY+G N++ VM FM
Sbjct: 16 LNWLI-MMLVLVSVPTKYYLVESGVFLMFKSMFMGVSKVFREVSFPNYVGLNFVCVMTFM 74

Query: 386 F 388
+
Sbjct: 75 Y 75


>tr|A7SWR2|A7SWR2_NEMVE Predicted protein (Fragment) OS=Nematostella
vectensis GN=v1g135695 PE=4 SV=1
Length = 77

Score = 33.9 bits (76), Expect = 5.8
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1

Query: 397 VGGCSRASAYTLVNCRRSCKLC 462
+G C R AY L NCR+SCK C
Sbjct: 55 MGECRRNPAYMLANCRKSCKQC 76