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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914191
Clone id YMU001_000056_B01
Library
Length 527
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000056_B01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGCAGATTGGAAGGAAACGTTAGAGAGAGTTCTGGGGTGGCTAGCTCCATTGGCGCACAA
TATGATTCGATGGCAATCAGAGCATAACTTTGAGCAGCAGCAGGTTCTTCCAAGAACCAA
TGTTCTACTGTTGCAGACCCTTTATTTTGCAGATCAAGCCAAGGCAGAGGCAGCTATTGT
GGAGCTGTTGGTAGGGTTAAATTACCTTTGGAGGCACGACAGAAACTTAAGAGCCAACTC
TTTGATGGAGTATGCTAGCAACAGAGACCTTGATGAGTATCTTGAGTGGCAGCTCTGAAT
GCGCATTCTATGGGATGGTACATGCATTGATATTTTTTCTCTCGCATCTTTTCTTGTATT
GAGTACAGAAGATTGCCAATAGCCATCTCTCATTGGCCTTCTTTACGCCTGTCTCAGCTA
GGTAGCTTTAGTAGCACCATGATTGAAGAGAGTTGTTCCTTTGGAAAGGGCATGGAATTC
CATGTCTCCTCTCATGTTTGGTGCCTATCATCATGTATACAACATTG
■■Homology search results ■■ -
sp_hit_id Q8NF91
Definition sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens
Align length 41
Score (bit) 29.6
E-value 9.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914191|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_B01.
         (527 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2     30   9.2  

>sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=2
          Length = 8797

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
 Frame = +2

Query: 5    DWKETLERVLGWLAP---LAHNMIRWQSEHNFEQQQVLPRT 118
            ++ E LE +L W+     LAH  I W S     +Q +L +T
Sbjct: 5531 EYNEMLELILKWIEKAKVLAHGTIAWNSASQLREQYILHQT 5571
tr_hit_id A9T360
Definition tr|A9T360|A9T360_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 99
Score (bit) 149.0
E-value 1.0e-34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914191|Adiantum capillus-veneris mRNA, clone:
YMU001_000056_B01.
         (527 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9T360|A9T360_PHYPA Predicted protein OS=Physcomitrella paten...   149   1e-34
tr|A7NX45|A7NX45_VITVI Chromosome chr5 scaffold_2, whole genome ...   132   1e-29
tr|A5C6D9|A5C6D9_VITVI Putative uncharacterized protein OS=Vitis...   132   1e-29
tr|Q5H9X6|Q5H9X6_ORYSA P0650D04.6 protein OS=Oryza sativa GN=P06...   130   5e-29
tr|Q0JF28|Q0JF28_ORYSJ Os04g0169500 protein OS=Oryza sativa subs...   130   5e-29
tr|A7QBH5|A7QBH5_VITVI Chromosome chr13 scaffold_74, whole genom...   130   5e-29
tr|A5BLA8|A5BLA8_VITVI Putative uncharacterized protein OS=Vitis...   130   5e-29
tr|A2XQC0|A2XQC0_ORYSI Putative uncharacterized protein OS=Oryza...   130   5e-29
tr|A9RSB7|A9RSB7_PHYPA Predicted protein (Fragment) OS=Physcomit...   127   3e-28
tr|Q9LTD4|Q9LTD4_ARATH Similarity to unknown protein OS=Arabidop...   126   8e-28
tr|Q0WVR1|Q0WVR1_ARATH Putative uncharacterized protein At3g2316...   126   8e-28
tr|A7QGU2|A7QGU2_VITVI Chromosome chr16 scaffold_94, whole genom...   120   4e-26
tr|A2ZI19|A2ZI19_ORYSI Putative uncharacterized protein OS=Oryza...   119   1e-25
tr|Q2QXR0|Q2QXR0_ORYSJ Expressed protein OS=Oryza sativa subsp. ...   117   3e-25
tr|Q0IQ45|Q0IQ45_ORYSJ Os12g0146500 protein OS=Oryza sativa subs...   117   3e-25
tr|A3CEX4|A3CEX4_ORYSJ Putative uncharacterized protein OS=Oryza...   117   3e-25
tr|Q2TM93|Q2TM93_NICSY Putative uncharacterized protein (Fragmen...   116   6e-25
tr|A7PPL3|A7PPL3_VITVI Chromosome chr8 scaffold_23, whole genome...   114   3e-24
tr|A5BEF8|A5BEF8_VITVI Putative uncharacterized protein OS=Vitis...   112   1e-23
tr|Q9LZ71|Q9LZ71_ARATH Putative uncharacterized protein T32M21_1...   109   7e-23
tr|Q9LTD7|Q9LTD7_ARATH Similarity to unknown protein OS=Arabidop...   103   7e-21
tr|Q84K32|Q84K32_ARATH Putative uncharacterized protein At5g5167...   103   7e-21
tr|Q1SN23|Q1SN23_MEDTR Putative uncharacterized protein OS=Medic...    97   4e-19
tr|A9SJR7|A9SJR7_PHYPA Predicted protein OS=Physcomitrella paten...    86   1e-15
tr|B6TYC0|B6TYC0_MAIZE Putative uncharacterized protein OS=Zea m...    86   1e-15
tr|B4FP64|B4FP64_MAIZE Putative uncharacterized protein OS=Zea m...    86   1e-15
tr|A7PNR6|A7PNR6_VITVI Chromosome chr8 scaffold_23, whole genome...    82   2e-14
tr|Q9FQZ2|Q9FQZ2_TOBAC Avr9/Cf-9 rapidly elicited protein 137 OS...    77   5e-13
tr|A5JV22|A5JV22_SOLLC Putative uncharacterized protein OS=Solan...    77   5e-13
tr|Q84M75|Q84M75_ORYSJ Putative uncharacterized protein OSJNBa00...    76   9e-13

>tr|A9T360|A9T360_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_191194 PE=4 SV=1
          Length = 521

 Score =  149 bits (375), Expect = 1e-34
 Identities = 71/99 (71%), Positives = 81/99 (81%), Gaps = 2/99 (2%)
 Frame = +2

Query: 2   ADWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIV 181
           ADWK+ LER+L WLAPLAHNMIRWQSEHNFEQQQV+ RTN LLLQTLYFAD  K EA I 
Sbjct: 422 ADWKDALERILSWLAPLAHNMIRWQSEHNFEQQQVVSRTNCLLLQTLYFADLTKTEAVIT 481

Query: 182 ELLVGLNYLWRHDRNLRANSLM--EYASNRDLDEYLEWQ 292
           ELLVGLNY+  H++ L+ N++M  EYA N+D DEYL WQ
Sbjct: 482 ELLVGLNYICGHEQELKQNTVMMEEYALNKDPDEYLGWQ 520


>tr|A7NX45|A7NX45_VITVI Chromosome chr5 scaffold_2, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020176001
           PE=4 SV=1
          Length = 530

 Score =  132 bits (332), Expect = 1e-29
 Identities = 62/97 (63%), Positives = 80/97 (82%)
 Frame = +2

Query: 5   DWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVE 184
           DWKE L+ +L WLAPLAHNMIRWQSE NFEQQQ++ RTNVLLLQTLYFAD+ K E+AI E
Sbjct: 428 DWKERLDGILRWLAPLAHNMIRWQSERNFEQQQIVTRTNVLLLQTLYFADREKTESAICE 487

Query: 185 LLVGLNYLWRHDRNLRANSLMEYASNRDLDEYLEWQL 295
           LLVGLNY+ R++   + N+L++ AS+ D ++ +EWQ+
Sbjct: 488 LLVGLNYICRYEH--QQNALLDCASSFDFEDCMEWQM 522


>tr|A5C6D9|A5C6D9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017371 PE=4 SV=1
          Length = 583

 Score =  132 bits (332), Expect = 1e-29
 Identities = 62/97 (63%), Positives = 80/97 (82%)
 Frame = +2

Query: 5   DWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVE 184
           DWKE L+ +L WLAPLAHNMIRWQSE NFEQQQ++ RTNVLLLQTLYFAD+ K E+AI E
Sbjct: 481 DWKERLDGILRWLAPLAHNMIRWQSERNFEQQQIVTRTNVLLLQTLYFADREKTESAICE 540

Query: 185 LLVGLNYLWRHDRNLRANSLMEYASNRDLDEYLEWQL 295
           LLVGLNY+ R++   + N+L++ AS+ D ++ +EWQ+
Sbjct: 541 LLVGLNYICRYEH--QQNALLDCASSFDFEDCMEWQM 575


>tr|Q5H9X6|Q5H9X6_ORYSA P0650D04.6 protein OS=Oryza sativa
           GN=P0650D04.6 PE=4 SV=1
          Length = 542

 Score =  130 bits (326), Expect = 5e-29
 Identities = 60/97 (61%), Positives = 80/97 (82%)
 Frame = +2

Query: 5   DWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVE 184
           DW+ETLE+ L WLAP+AHNMIRWQ+E NFEQQQ++ + NVLLLQTLYFAD+ K EA I E
Sbjct: 447 DWRETLEKTLTWLAPMAHNMIRWQAERNFEQQQIVLKGNVLLLQTLYFADREKTEAVICE 506

Query: 185 LLVGLNYLWRHDRNLRANSLMEYASNRDLDEYLEWQL 295
           LLVGLNY+ R+++  + N+L++ +S+ D D+ +EWQL
Sbjct: 507 LLVGLNYICRYEQ--QQNALLDCSSSLDFDDCMEWQL 541


>tr|Q0JF28|Q0JF28_ORYSJ Os04g0169500 protein OS=Oryza sativa subsp.
           japonica GN=Os04g0169500 PE=4 SV=1
          Length = 106

 Score =  130 bits (326), Expect = 5e-29
 Identities = 60/97 (61%), Positives = 80/97 (82%)
 Frame = +2

Query: 5   DWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVE 184
           DW+ETLE+ L WLAP+AHNMIRWQ+E NFEQQQ++ + NVLLLQTLYFAD+ K EA I E
Sbjct: 11  DWRETLEKTLTWLAPMAHNMIRWQAERNFEQQQIVLKGNVLLLQTLYFADREKTEAVICE 70

Query: 185 LLVGLNYLWRHDRNLRANSLMEYASNRDLDEYLEWQL 295
           LLVGLNY+ R+++  + N+L++ +S+ D D+ +EWQL
Sbjct: 71  LLVGLNYICRYEQ--QQNALLDCSSSLDFDDCMEWQL 105


>tr|A7QBH5|A7QBH5_VITVI Chromosome chr13 scaffold_74, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00034973001
           PE=4 SV=1
          Length = 602

 Score =  130 bits (326), Expect = 5e-29
 Identities = 60/94 (63%), Positives = 74/94 (78%)
 Frame = +2

Query: 5   DWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVE 184
           +W E +  +L WLAPLAHNMIRWQSE +FEQQ ++ RTNVLL+QTLYFADQ K EA I E
Sbjct: 506 EWSEAMAGILEWLAPLAHNMIRWQSERSFEQQNLVSRTNVLLVQTLYFADQEKTEAIITE 565

Query: 185 LLVGLNYLWRHDRNLRANSLMEYASNRDLDEYLE 286
           LLVGLNY+WR  R L A +L+E AS++  +EYL+
Sbjct: 566 LLVGLNYIWRFGRELNAKALLECASSKIFEEYLD 599


>tr|A5BLA8|A5BLA8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_002020 PE=4 SV=1
          Length = 357

 Score =  130 bits (326), Expect = 5e-29
 Identities = 60/94 (63%), Positives = 74/94 (78%)
 Frame = +2

Query: 5   DWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVE 184
           +W E +  +L WLAPLAHNMIRWQSE +FEQQ ++ RTNVLL+QTLYFADQ K EA I E
Sbjct: 261 EWSEAMAGILEWLAPLAHNMIRWQSERSFEQQNLVSRTNVLLVQTLYFADQEKTEAIITE 320

Query: 185 LLVGLNYLWRHDRNLRANSLMEYASNRDLDEYLE 286
           LLVGLNY+WR  R L A +L+E AS++  +EYL+
Sbjct: 321 LLVGLNYIWRFGRELNAKALLECASSKIFEEYLD 354


>tr|A2XQC0|A2XQC0_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_14830 PE=4 SV=1
          Length = 499

 Score =  130 bits (326), Expect = 5e-29
 Identities = 60/97 (61%), Positives = 80/97 (82%)
 Frame = +2

Query: 5   DWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIVE 184
           DW+ETLE+ L WLAP+AHNMIRWQ+E NFEQQQ++ + NVLLLQTLYFAD+ K EA I E
Sbjct: 404 DWRETLEKTLTWLAPMAHNMIRWQAERNFEQQQIVLKGNVLLLQTLYFADREKTEAVICE 463

Query: 185 LLVGLNYLWRHDRNLRANSLMEYASNRDLDEYLEWQL 295
           LLVGLNY+ R+++  + N+L++ +S+ D D+ +EWQL
Sbjct: 464 LLVGLNYICRYEQ--QQNALLDCSSSLDFDDCMEWQL 498


>tr|A9RSB7|A9RSB7_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_22604 PE=4 SV=1
          Length = 481

 Score =  127 bits (319), Expect = 3e-28
 Identities = 60/74 (81%), Positives = 65/74 (87%)
 Frame = +2

Query: 2   ADWKETLERVLGWLAPLAHNMIRWQSEHNFEQQQVLPRTNVLLLQTLYFADQAKAEAAIV 181
           ADWK+ LER+L WLAPLAHNMIRWQSEHNFEQQQVL RTN LLLQTLYFAD AK EAAI 
Sbjct: 407 ADWKDALERILSWLAPLAHNMIRWQSEHNFEQQQVLSRTNCLLLQTLYFADLAKTEAAIT 466

Query: 182 ELLVGLNYLWRHDR 223
           ELLVGLNY+  H++
Sbjct: 467 ELLVGLNYVCGHEQ 480


>tr|Q9LTD4|Q9LTD4_ARATH Similarity to unknown protein OS=Arabidopsis
           thaliana PE=4 SV=1
          Length = 531

 Score =  126 bits (316), Expect = 8e-28
 Identities = 61/97 (62%), Positives = 79/97 (81%), Gaps = 1/97 (1%)
 Frame = +2

Query: 5   DWKETLERVLGWLAPLAHNMIRWQSEHNFEQQ-QVLPRTNVLLLQTLYFADQAKAEAAIV 181
           DWKET++ +L WLAPLAHNMIRWQSE NFEQQ Q++ RTNVLLLQTLYFAD+ K EAAI 
Sbjct: 428 DWKETIDGILSWLAPLAHNMIRWQSERNFEQQNQIVKRTNVLLLQTLYFADREKTEAAIC 487

Query: 182 ELLVGLNYLWRHDRNLRANSLMEYASNRDLDEYLEWQ 292
           +LLVGLNY+  +++  + N+L++ AS+ D ++  EWQ
Sbjct: 488 KLLVGLNYICHYEQ--QQNALLDCASSFDYEDCFEWQ 522